CX077946

Overview
NameCX077946
Unique NameCX077946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4904 contig Csv1_Contig4904:1..860. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.422e-26
Identity = 81/245 (33.06%), Postives = 119/245 (48.57%), Query Frame = 2
Query:   71 FCLYRNRSVSRTSETGSSEPSVQPGRNVGIELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSI-XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFL----GRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYS 781
            F + R++   +T E    +    P   + +E      + +   EL  AT +FSD + IG G +G+VYKG L  G++VA+K+      Q   EF  E+  L+ + HRNLV+LLGYC +   Q L+YEY+PNGS+   L   S   RQ L    RL I                P ++H+D K +N+L+D     KVAD G+   +    G       ++ V     ++  E     R +EKSDVYS
Sbjct:  584 FFIKRSKRKRKTREVDMEQEHPLPKPPMNME----SVKGYNFTELDSATSSFSDLSQIGRGGYGKVYKGHLPGGLVVAVKRAEQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDAL---SARFRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYS 821          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.422e-26
Identity = 72/203 (35.47%), Postives = 111/203 (54.68%), Query Frame = 2
Query:  188 FQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPT---QEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGP-SQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            F   EL  AT+NFS   ++G+G  G VYKG+L DG +VA+KK         +EFI+EV  L+ I HRN+V LLG C E  +  L+YE+IPNG++  HL+    +        + R++I               P + H+D K+ N+++DE + AKV+D G    +   D    ++ V+    ++  E  +  +F++KSDVYSF
Sbjct:  435 FSSRELEKATENFSSNRILGQGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSP-IYHRDVKSTNIMLDEKYRAKVSDFGTSRTV-TVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSF 635          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.422e-26
Identity = 70/209 (33.49%), Postives = 111/209 (53.11%), Query Frame = 2
Query:  167 SIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            S+   + F   +L  AT  F+   ++G+G  G VYKG+L+DGM+VA+KK      +   EFI+E+  L+ I HRN+V +LG C E  +  L+YE+IPN ++  HL+ PS+      E +  ++                P + H+D K+ N+L+DE   AKV+D G+   +   D    ++ V     ++  E  +   F+ KSDVYSF
Sbjct:  371 SVNRTKVFSSNDLENATDRFNASRILGQGGQGTVYKGMLEDGMIVAVKKSKALKEENLEEFINEIILLSQINHRNVVKILGCCLETEVPILVYEFIPNRNLFDHLHNPSEDFPMSWEVRLCIACEVADALSYLHSAVSIP-IYHRDVKSTNILLDEKHRAKVSDFGISRSVA-IDDTHLTTIVQGTIGYVDPEYLQSNHFTGKSDVYSF 577          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.422e-26
Identity = 72/211 (34.12%), Postives = 110/211 (52.13%), Query Frame = 2
Query:  161 ELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAP---TQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            E ++  ++ F   EL  AT NF+   ++G+G  G VYKG+L DG +VA+K+         +EFI+EV  LA I HRN+V LLG C E  +  L+YE++PNG +   L           E +  ++I               P + H+D KT N+L+DE +  KV+D G    +   D    ++QV     ++  E  +  +F++KSDVYSF
Sbjct:  403 EGNVEMSKIFSSNELEKATDNFNTNRVLGQGGQGTVYKGMLVDGRIVAVKRSKAMDEDKVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLRDECDDYIMTWEVRLHIAIEIAGALSYLHSAASFP-IYHRDIKTTNILLDEKYQVKVSDFGTSRSV-TIDQTHLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSF 611          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.422e-26
Identity = 79/246 (32.11%), Postives = 127/246 (51.63%), Query Frame = 2
Query:   68 WFCLYRNRSVSRTSETGSSEPSVQPGRNVGIELSIREARRFQME--ELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKK---RPGAPTQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFL--GRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            +F + RNR  ++    G              EL I++A+  Q++   + LAT +FS  N +GEG FG VYKG+L  G  +A+K+   + G    EFI+EV  +A +QHRNLV LLG+C +   + LIYE+  N S+  +++  ++      E ++R+ I                ++VH+D K +NVL+D+    K+AD G+       +T     +S+V     ++A E      FS K+DV+SF
Sbjct:  300 YFFMTRNRRTAKQRHEGKDLE----------ELMIKDAQLLQLDFDTIRLATNDFSRDNQLGEGGFGAVYKGVLDYGEEIAVKRLSMKSGQGDNEFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFDSNRRMILDWETRYRI-ISGVARGLLYLHEDSRFKIVHRDMKASNVLLDDAMNPKIADFGMAKLFDTDQTSQTRFTSKVAGTYGYMAPEYAMSGEFSVKTDVFSF 534          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.422e-26
Identity = 77/241 (31.95%), Postives = 123/241 (51.04%), Query Frame = 2
Query:   80 YRNRSVSRTSETGSSEPSVQPGRNVGIELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS-IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFL--GRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            Y+N+ + ++  +GS             E S  E+     E L  AT NFS +N +G G FG VYKG+   G  +A+K+  G   Q   EF +E+  LA +QHRNLV L+G+C +   + L+YE+I N S+   ++   +  RQ L++  R   I                R++H+D K +N+L+D++   K+AD GL      G+T     +S++     ++A E     +FS K+DV+SF
Sbjct:  318 YKNKVLGKSPLSGSIAED---------EFSNTESLLVHFETLKTATDNFSSENELGRGGFGSVYKGVFPQGQEIAVKRLSGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFDTEK--RQLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQEMNPKIADFGLAKLFDSGQTMTHRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSF 547          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.469e-26
Identity = 72/221 (32.58%), Postives = 115/221 (52.04%), Query Frame = 2
Query:  134 VQPGRNVGIELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKR---PGAPTQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSI-XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            V+   ++ +    +  R+    +L  AT  F + +LIG G FG+VYK +L+DG  VAIKK     G   +EF+ E+  +  I+HRNLV LLGYC+  + + L+YE++  GS+   L+ P +    KL +  R  I                P ++H+D K++NVL+DE+  A+V+D G+   +   D     S +     ++  E  +  R S K DVYS+
Sbjct:  853 VKEALSINLAAFEKPLRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAG-VKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSY 1072          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 5.694e-26
Identity = 74/207 (35.75%), Postives = 112/207 (54.11%), Query Frame = 2
Query:  179 ARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKK--RPGAP-TQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSI-XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            A  F   EL+ AT NF     +GEG FG VYKG L   G +VA+K+  R G    +EF+ EV  L+ + H NLV L+GYC + + + L+YE++P GS+  HL+      ++ L++  R+ I                P V+++DFK++N+L+DE F  K++D GL       D +  S++V     + A E     + + KSDVYSF
Sbjct:   71 AHTFAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLH-DLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSF 276          

HSP 2 Score: 23.0978 bits (48), Expect = 5.694e-26
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  783 FGVFLLELVSGREA 824
            FGV  LEL++GR+A
Sbjct:  276 FGVVFLELITGRKA 289          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.837e-26
Identity = 86/227 (37.89%), Postives = 117/227 (51.54%), Query Frame = 2
Query:  119 SSEPSVQPGR-NVGIELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXX-PRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            SS  ++ P R N+ +E    + RR    E+ L T NF  + +IGEG FG VY G L D   VA+K    + +Q   EF  EV  L  + H NLV+L+GYC E     LIYEY+ NG +  HL G        L++++RLSI                P +VH+D K+ N+L+DE F AK+AD GL       + +  S+ V     +L  E     R +EKSDVYSF
Sbjct:  542 SSIRALHPSRANLSLE---NKKRRITYSEILLMTNNF--ERVIGEGGFGVVYHGYLNDSEQVAVKVLSPSSSQGYKEFKAEVELLLRVHHINLVSLVGYCDEQAHLALIYEYMANGDLKSHLSGKH--GDCVLKWENRLSIAVETALGLEYLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLSRSFSVGEESHVSTGVVGTPGYLDPEYYRTYRLTEKSDVYSF 761          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.623e-26
Identity = 68/205 (33.17%), Postives = 110/205 (53.66%), Query Frame = 2
Query:  185 RFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQ-KLEFKHRLSIXXXXXXXXXXXXXXXP-RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            +F ++++  AT NF   N IG+G FGEVYKG L +G  VA+K+      Q   EF +EV  +A +QHRNLV LLG+  +   + L++E++PN S+   L+G +  +++ +L++  R +I                  ++H+D K +N+L+D D   K+AD G+            + +V     ++  E     +FS KSDVYSF
Sbjct:  333 QFDIKDIEAATSNFLASNKIGQGGFGEVYKGTLSNGTEVAVKRLSRTSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEFVPNKSLDYFLFGSTNPTKKGQLDWTRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRDHQTEDSTGRVVGTFGYMPPEYVAHGQFSTKSDVYSF 537          
The following BLAST results are available for this feature:
BLAST of CX077946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 305
Match NameE-valueIdentityDescription
Y5374_ARATH3.422e-2633.06Probable LRR receptor-like serine/threonine-protei... [more]
WAKLH_ARATH3.422e-2635.47Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
WAKLG_ARATH3.422e-2633.49Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
WAKLD_ARATH3.422e-2634.12Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
CRK41_ARATH3.422e-2632.11Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK29_ARATH3.422e-2631.95Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
BRI1_ARATH4.469e-2632.58Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
PBS1_ARATH5.694e-2635.75Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
Y5169_ARATH5.837e-2637.89Probable LRR receptor-like serine/threonine-protei... [more]
CRK30_ARATH7.623e-2633.17Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_6A04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6A04-A8-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077946 ID=CX077946; Name=CX077946; organism=Citrus sinensis; type=EST; length=861bp
CCTTGCAGCAATATTTGGAGCTGCTGCAGGAGCTGTGGCATTGATGGGAA
TAATTTTCTTTCTTAGTTGGTTCTGCTTGTATCGAAATCGGAGTGTTTCC
AGAACTTCTGAGACAGGGTCTTCAGAGCCATCTGTTCAACCGGGAAGAAA
TGTCGGGATCGAGTTATCAATTCGAGAAGCTAGGCGATTTCAGATGGAAG
AGTTGTCTTTGGCCACCAAAAACTTTAGTGATAAAAACTTGATTGGAGAA
GGAAAGTTTGGGGAGGTATACAAGGGATTGCTTCAAGATGGGATGCTTGT
AGCCATCAAAAAGCGACCTGGAGCACCTACTCAGGAATTTATTGATGAGG
TACGCTTCCTTGCATCTATTCAACATCGGAATCTTGTCACTCTTCTGGGT
TACTGTCAAGAAAATAATTTACAATTTCTTATATACGAGTATATACCCAA
TGGAAGTGTTTCCATTCACCTGTATGGACCCAGTCAAGTTTCCCGACAGA
AGCTAGAGTTCAAGCATAGACTTTCAATAGCTCTTGGGGCAGCTAAAGGT
CTGGCTCATCTTCACTCCCTGAGTCCACGTGTAGTACATAAGGATTTTAA
AACAGCAAATGTTCTTGTTGATGAAGATTTCATAGCTAAGGTTGCAGATG
CAGGACTTCGTAATTTTCTAGGGAGAACCGATGTTGCAGGGCCATCCTCA
CAAGTGACAGCAGATGAGATATTTCTTGCTTCAGAGGTGAAAGAGTTCAG
AAGATTTTCAGAAAAAAGTGATGTGTATAGTTTTTGGGGTTTTTCTTTTG
GAGCTAGTAAGCGGGCGAGAAGCATCATCTTCACTGTCTCCAGATTCCAG
TCAGGACCTGG
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