CX077946

Overview
NameCX077946
Unique NameCX077946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4904 contig Csv1_Contig4904:1..860. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.300e-25
Identity = 68/203 (33.50%), Postives = 106/203 (52.22%), Query Frame = 2
Query:  185 RFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIK---KRPGAPTQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            +F  + +  AT  FS  N +G+G FG+VYKG L +G+ VA+K   K  G   +EF +EV  +A +QHRNLV LLG+C E   + L+YE++ N S+   L+     S+     ++++ I                 ++H+D K  N+L+D D   KVAD G+            + +V     +++ E   + +FS KSDVYSF
Sbjct:  327 QFDFKVIEAATDKFSMCNKLGQGGFGQVYKGTLPNGVQVAVKRLSKTSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFDSRMQSQLDWTTRYKI-IGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAHTRRVVGTYGYMSPEYAMYGQFSMKSDVYSF 528          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.635e-25
Identity = 76/202 (37.62%), Postives = 106/202 (52.48%), Query Frame = 2
Query:  188 FQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQ--EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            F  E++  AT  +    ++G+G    VYKG+L D  +VAIKK R G   Q  +FI+EV  L+ I HRN+V LLG C E  +  L+YE+I  GS+  HL+G   VS    E +  ++I               P ++H+D KT N+L+DE+  AKVAD G    L   D    ++ V     +L  E       +EKSDVYSF
Sbjct:   96 FTEEDMKEATNGYDVSRILGQGGQWTVYKGILPDNSIVAIKKTRLGDNNQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITGGSLFDHLHGSMFVSSLTWEHRLEIAIEVAGAIAYLHSGASIP-IIHRDIKTENILLDENLTAKVADFGASK-LKPMDKEQLTTMVQGTLGYLDPEYYTTWLLNEKSDVYSF 295          

HSP 2 Score: 23.483 bits (49), Expect = 1.635e-25
Identity = 9/14 (64.29%), Postives = 13/14 (92.86%), Query Frame = 3
Query:  783 FGVFLLELVSGREA 824
            FGV L+EL+SG++A
Sbjct:  295 FGVVLMELISGQKA 308          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.698e-25
Identity = 76/216 (35.19%), Postives = 115/216 (53.24%), Query Frame = 2
Query:  161 ELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIK-----KRPGAPTQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVS--IHLYGPSQVSRQKLEFKHRLSI-XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            E+ + + +RF + EL +AT +FS+KN++G G FG+VYKG L DG LVA+K     + PG   Q F  EV  ++   HRNL+ L G+C     + L+Y Y+ NGSV+  +    PSQ+    L +  R  I                P+++H+D K AN+L+DE+F A V D GL   +   D    ++ V      +A E     + SEK+DV+ +
Sbjct:  284 EVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQL---PLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGY 494          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.095e-25
Identity = 77/238 (32.35%), Postives = 116/238 (48.74%), Query Frame = 2
Query:  131 SVQPGRNVGIELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKR---PGAPTQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQ---------VSRQK--------LEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            SV    ++ +    +  R+     L  AT  FS + ++G G FGEVYK  L+DG +VAIKK     G   +EF+ E+  +  I+HRNLV LLGYC+    + L+YEY+  GS+   L+  S           +R+K        L F H   I               P ++H+D K++NVL+DEDF A+V+D G+   +   D     S +     ++  E  +  R + K DVYS+
Sbjct:  828 SVPEPLSINVATFEKPLRKLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLRDGSVVAIKKLIRITGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSCI---------------PHIIHRDMKSSNVLLDEDFEARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSY 1050          

HSP 2 Score: 21.557 bits (44), Expect = 2.095e-25
Identity = 8/13 (61.54%), Postives = 12/13 (92.31%), Query Frame = 3
Query:  783 FGVFLLELVSGRE 821
            +GV LLEL+SG++
Sbjct: 1050 YGVILLELLSGKK 1062          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 2.099e-25
Identity = 73/205 (35.61%), Postives = 107/205 (52.20%), Query Frame = 2
Query:  188 FQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP-RVVHKDFKTANVLVDEDFIAKVADAGLRNFLG--RTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            F   EL  AT++F   N +GEG FG VYKG L DG  VA+K       Q   +F+ E+  ++++QHRNLV L G C E   + L+YEY+PNGS+   L+G   +    L++  R  I                 R+VH+D K +N+L+D   + KV+D GL       +T +   S++V     +LA E       +EK+DVY+F
Sbjct:  681 FTYSELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSRQGKGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGEKTL---HLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHI---STRVAGTIGYLAPEYAMRGHLTEKTDVYAF 879          

HSP 2 Score: 22.7126 bits (47), Expect = 2.099e-25
Identity = 11/19 (57.89%), Postives = 12/19 (63.16%), Query Frame = 3
Query:  762 KKVMCIVFGVFLLELVSGR 818
            +K     FGV  LELVSGR
Sbjct:  872 EKTDVYAFGVVALELVSGR 890          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.109e-25
Identity = 74/218 (33.94%), Postives = 116/218 (53.21%), Query Frame = 2
Query:  188 FQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKK---------------RPGAPTQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSI-XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRT---DVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            F ++EL+LAT  FS +  +G G FG VY+G+L DG  VAIK+               R       F++E+  ++ + H+NLV LLG+ ++   + L+YEY+ NGS++ HL+ P       L ++ RL I                P V+H+D K++N+L+D  + AKV+D GL   +G T   DV+  S        ++  E  +F++ + KSDVYSF
Sbjct:  431 FSIDELALATDGFSVRFHLGIGSFGSVYQGVLSDGRHVAIKRAELTNPTLSGTTMRHRRADKDSAFVNELESMSRLNHKNLVRLLGFYEDTEERILVYEYMKNGSLADHLHNP---QFDPLSWQTRLMIALDAARGIQYLHEFIVPPVIHRDIKSSNILLDATWTAKVSDFGLSQ-MGPTEEDDVSHLSLHAAGTLGYIDPEYYKFQQLTTKSDVYSF 644          

HSP 2 Score: 23.0978 bits (48), Expect = 2.109e-25
Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  783 FGVFLLELVSGREA 824
            FGV LLEL+SG +A
Sbjct:  644 FGVVLLELLSGHKA 657          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 2.130e-25
Identity = 75/239 (31.38%), Postives = 115/239 (48.12%), Query Frame = 2
Query:  116 GSSEPSVQPGRNVGIELSIREA---RRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPT-------------QEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            GS   SV    N   E  I ++   + F   EL  AT+NF   +++GEG FG V+KG + +  L A K   G                QE++ EV +L    H NLV L+GYC E+  + L+YE++P GS+  HL+       Q L +  RL +                 V+++DFKT+N+L+D ++ AK++D GL       D +  S+++     + A E       + KSDVYS+
Sbjct:   30 GSKSSSVSIRTNPRTEGEILQSPNLKSFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYF-QPLSWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSY 267          

HSP 2 Score: 22.3274 bits (46), Expect = 2.130e-25
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  783 FGVFLLELVSGREA 824
            +GV LLE++SGR A
Sbjct:  267 YGVVLLEVLSGRRA 280          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.218e-25
Identity = 69/203 (33.99%), Postives = 103/203 (50.74%), Query Frame = 2
Query:  185 RFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            RF    +  AT +FS +N IG+G FG VYKG L  G  +A+K+      Q   EF +EV  L  +QHRNLV LLG+C E + + L+YE++PN S+   ++   +      + + R+ I                R++H+D K +N+L+D     KVAD G+            + +V     ++A E    R FS K+DVYSF
Sbjct:  326 RFDFRMILTATDDFSFENKIGQGGFGSVYKGKLPGGEEIAVKRLTRGSGQGEIEFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEEKRLLLTWDMRARI-IEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKVADFGMARLFNMDQTRAVTRKVVGTFGYMAPEYVRNRTFSVKTDVYSF 527          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.897e-25
Identity = 72/209 (34.45%), Postives = 112/209 (53.59%), Query Frame = 2
Query:  170 IREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPT---QEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            + + R F   EL  AT+NFS+  ++G G  G VYKG+L DG  VA+KK         QEFI+EV  L+ I HR++V LLG C E  +  L+YE+I NG++  H++         L   + R+++               P + H+D K+ N+L+DE + AKVAD G    +   D    ++ ++    ++  E  +  +++EKSDVYSF
Sbjct:  435 VEKTRVFNSRELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPMLVYEFIINGNLFKHIHEEESDDYTMLWGMRLRIAVDIAGALSYLHSSASSP-IYHRDIKSTNILLDEKYRAKVADFGTSRSV-TIDQTHWTTVISGTVGYVDPEYYQSSQYTEKSDVYSF 641          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.897e-25
Identity = 74/206 (35.92%), Postives = 112/206 (54.37%), Query Frame = 2
Query:  185 RFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIK---KRPGAPTQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP-RVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTD-VAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            +F+ + +  AT NF + N +G G FGEVYKG   +G  VA+K   K  G   +EF +EV  +A +QHRNLV LLGY  + + + L+YE++PN S+   L+ P  V + +L++  R +I                  ++H+D K  N+L+D D   K+ D G+ RNF  R D     +++V     ++  E     +FS KSDVYSF
Sbjct:  299 QFEFKAIEAATCNFHNVNKLGHGGFGEVYKGTFPNGTEVAVKRLSKTSGQGEEEFKNEVFLVAKLQHRNLVKLLGYAVKGDEKILVYEFLPNKSLDHFLFDP--VKKGQLDWTRRYNIINGITRGIVYLHQDSRLTIIHRDLKAGNILLDADMNPKIVDFGVARNF--RVDQTEATTARVVGTIGYMPPEYVTNGQFSTKSDVYSF 500          
The following BLAST results are available for this feature:
BLAST of CX077946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 305
Match NameE-valueIdentityDescription
CRK5_ARATH1.300e-2533.50Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
WAKLS_ARATH1.635e-2537.62Putative wall-associated receptor kinase-like 16 O... [more]
SERK2_ARATH1.698e-2535.19Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
BRL1_ARATH2.095e-2532.35Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
Y5614_ARATH2.099e-2535.61Probable LRR receptor-like serine/threonine-protei... [more]
ACCR4_ARATH2.109e-2533.94Serine/threonine-protein kinase-like protein CCR4 ... [more]
APK1B_ARATH2.130e-2531.38Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
CRK38_ARATH2.218e-2533.99Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
WAKLN_ARATH2.897e-2534.45Wall-associated receptor kinase-like 18 OS=Arabido... [more]
CRK24_ARATH2.897e-2535.92Cysteine-rich receptor-like protein kinase 24 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_6A04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6A04-A8-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077946 ID=CX077946; Name=CX077946; organism=Citrus sinensis; type=EST; length=861bp
CCTTGCAGCAATATTTGGAGCTGCTGCAGGAGCTGTGGCATTGATGGGAA
TAATTTTCTTTCTTAGTTGGTTCTGCTTGTATCGAAATCGGAGTGTTTCC
AGAACTTCTGAGACAGGGTCTTCAGAGCCATCTGTTCAACCGGGAAGAAA
TGTCGGGATCGAGTTATCAATTCGAGAAGCTAGGCGATTTCAGATGGAAG
AGTTGTCTTTGGCCACCAAAAACTTTAGTGATAAAAACTTGATTGGAGAA
GGAAAGTTTGGGGAGGTATACAAGGGATTGCTTCAAGATGGGATGCTTGT
AGCCATCAAAAAGCGACCTGGAGCACCTACTCAGGAATTTATTGATGAGG
TACGCTTCCTTGCATCTATTCAACATCGGAATCTTGTCACTCTTCTGGGT
TACTGTCAAGAAAATAATTTACAATTTCTTATATACGAGTATATACCCAA
TGGAAGTGTTTCCATTCACCTGTATGGACCCAGTCAAGTTTCCCGACAGA
AGCTAGAGTTCAAGCATAGACTTTCAATAGCTCTTGGGGCAGCTAAAGGT
CTGGCTCATCTTCACTCCCTGAGTCCACGTGTAGTACATAAGGATTTTAA
AACAGCAAATGTTCTTGTTGATGAAGATTTCATAGCTAAGGTTGCAGATG
CAGGACTTCGTAATTTTCTAGGGAGAACCGATGTTGCAGGGCCATCCTCA
CAAGTGACAGCAGATGAGATATTTCTTGCTTCAGAGGTGAAAGAGTTCAG
AAGATTTTCAGAAAAAAGTGATGTGTATAGTTTTTGGGGTTTTTCTTTTG
GAGCTAGTAAGCGGGCGAGAAGCATCATCTTCACTGTCTCCAGATTCCAG
TCAGGACCTGG
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