CX077943

Overview
NameCX077943
Unique NameCX077943
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4902 contig Csv1_Contig4902:1..806. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.756e-21
Identity = 54/149 (36.24%), Postives = 87/149 (58.39%), Query Frame = 1
Query:  346 GMQRYNRLKDMDCAEGLFLLG-HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYL 789
            G++ +  ++     E ++LL  +YYP CP P+L +G  +H D S++T+L+ + + GLQV  +  W +V  I  AL+V++GD ++++SN K+KSV HR        R+S   F     + E     GPI +LLSE NPP +K    K+Y+
Sbjct:  195 GLEGHEMIEAAGGDEIVYLLKINYYPPCPRPDLALGVVAHTDMSYITILVPNEVQGLQVFKDGHWYDVKYIPNALIVHIGDQVEILSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPSEHE----VGPIPKLLSEANPPKFKTKKYKDYV 339          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.644e-19
Identity = 44/90 (48.89%), Postives = 61/90 (67.78%), Query Frame = 1
Query:  409 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACF 678
            +YYP CPEPE T+GT  H D + LT+LLQD +GGL+VL + EW  V+P+ GA+V+N+GD    +SN ++KS  HR +      R S+A F
Sbjct:  232 NYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFF 321          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.644e-19
Identity = 44/90 (48.89%), Postives = 61/90 (67.78%), Query Frame = 1
Query:  409 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACF 678
            +YYP CPEPE T+GT  H D + LT+LLQD +GGL+VL + EW  V+P+ GA+V+N+GD    +SN ++KS  HR +      R S+A F
Sbjct:  232 NYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFF 321          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.644e-19
Identity = 47/126 (37.30%), Postives = 74/126 (58.73%), Query Frame = 1
Query:  409 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEY 786
            +YYP CP P+L +G  +H D S LTVL+ + + GLQV  ++ W++   I  ALV+++GD ++++SN K+K+V HR        R+S   F      +      GP+ +L+ +ENPP YK    K+Y
Sbjct:  204 NYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTV----VGPLPQLVDDENPPKYKAKKFKDY 325          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.804e-19
Identity = 48/128 (37.50%), Postives = 81/128 (63.28%), Query Frame = 1
Query:  415 YPTCPEPELTMGTDSHADSSFLTVLLQD-RLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSE--ENPPIYKEITVKEYL 789
            YP CP+P+L  G  +H+D+  + +L QD ++ GLQ+L + EWV+V P++ ++V+NLGD +++I+N K+KSV HRV+A+  G R+S+A F+     S       P   +L +  E+ P Y +    +Y+
Sbjct:  162 YPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMHHSIVINLGDQIEVITNGKYKSVMHRVIAQSDGTRMSIASFYNPGNDS----FISPAPAVLEKKTEDAPTYPKFVFDDYM 285          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.662e-19
Identity = 51/128 (39.84%), Postives = 81/128 (63.28%), Query Frame = 1
Query:  415 YPTCPEPELTMGTDSHADSSFLTVLLQD-RLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGP-INELLSEENPPIYKEITVKEYLS 792
            YP CP PEL  G  +H D+  L +L QD R+ GLQ+L + EWV+V P+  ++V+NLGD +++I+N K+KSV HRV+A+  G R+S+A F+     S+      P + E  +EE   +Y +   ++Y++
Sbjct:  163 YPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLLKDGEWVDVPPMNHSIVINLGDQVEVITNGKYKSVMHRVVAQTDGNRMSLASFYNP--GSDAVIFPAPALVEKEAEEKKEVYPKFVFEDYMN 288          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.662e-19
Identity = 47/127 (37.01%), Postives = 80/127 (62.99%), Query Frame = 1
Query:  415 YPTCPEPELTMGTDSHADSSFLTVLLQD-RLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSE-ENPPIYKEITVKEYL 789
            YP CP+PEL  G  +H D+  + +L QD ++ GLQ+L +++W++V P+  ++V+NLGD +++I+N K+KSV HRV+A+  G R+S+A F+     +       P + LL E E   +Y +    +Y+
Sbjct:  162 YPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVMHRVIAQTDGARMSIASFYNPGDDAV----ISPASTLLKENETSEVYPKFVFDDYM 284          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.662e-19
Identity = 52/135 (38.52%), Postives = 80/135 (59.26%), Query Frame = 1
Query:  415 YPTCPEPELTMGTDSHADSSFLTVLLQD-RLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEEN-----PPIYKEITVKEYLSHSY 801
            YP CP P+L  G  +H D+  + +L QD R+GGLQ+L + EWV+V P+  ++VVNLGD +++I+N ++KSV HRV+A+  G R+S+A F+     +       P   L+ EE      P    E  +K Y+ H +
Sbjct:  168 YPPCPRPDLVEGLRAHTDAGGIILLFQDDRVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGRYKSVIHRVVAQTDGNRMSIASFYNPGSDAV----ISPAPALVKEEEAVVAYPKFVFEDYMKLYVRHKF 298          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.782e-19
Identity = 48/127 (37.80%), Postives = 82/127 (64.57%), Query Frame = 1
Query:  415 YPTCPEPELTMGTDSHADSSFLTVLLQD-RLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGP-INELLSEENPPIYKEITVKEYL 789
            YP CP+P+L  G  +H D+  + +L QD ++ GLQ+L +++W++V P+  ++V+NLGD +++I+N K+KSV HRV+A+  G R+S+A F+     S+      P + E  +EEN  IY +    +Y+
Sbjct:  162 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVPHRVIAQTDGTRMSLASFYNP--ASDAVIYPAPALVERDAEENKQIYPKFVFDDYM 286          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.782e-19
Identity = 42/90 (46.67%), Postives = 67/90 (74.44%), Query Frame = 1
Query:  415 YPTCPEPELTMGTDSHADSSFLTVLLQD-RLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFF 681
            YP CP+PEL  G  +H D+  L +L QD ++ GL VL + +WV+V P++ ++V+NLGD +++I+N K+KSV HRV+A++ G R+S+A F+
Sbjct:  163 YPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVLKDGKWVDVPPMHHSIVINLGDQLEVITNGKYKSVMHRVIAQEDGNRMSIASFY 252          
The following BLAST results are available for this feature:
BLAST of CX077943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
FLS_PETHY1.756e-2136.24Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
GAOX2_ORYSJ1.644e-1948.89Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]
GAOX2_ORYSI1.644e-1948.89Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
FLS_CITUN1.644e-1937.30Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
ACCO1_MALDO2.804e-1937.501-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
ACCO_PERAE3.662e-1939.841-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO_PEA3.662e-1937.011-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO1_ORYSJ3.662e-1938.521-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO4_PETHY4.782e-1937.801-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO3_CUCME4.782e-1946.671-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_6A01_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6A01-A2-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077943 ID=CX077943; Name=CX077943; organism=Citrus sinensis; type=EST; length=806bp
CGAATTCATTATCCCAATCCTTGACTTGGATGGTGTCAATAAAGATGCCA
TTTCACGGGCCAAGATAGTCAAGCAAGTTCAAAATGCATGCCAGAACTGG
GGGTTCTTTCAAATTGTCAATCATGGAATTCCAGTTAGCATGTTGGATGA
AATGATTGATGGGGTAATTGGATTTCATGAGCAAGATACTGAGGTGAAAA
AGAAGTTCTATACGCGAGATTACCAGAAAAGGAAGGTGCTTTATAATACA
AATTTTGACTTTTATGCAGCACCAGCAGCTAATTGGAGAGATACCCTCAG
TTGCGTTATGGCTCCTAATCCACCTGATCCTGAAGAATTGCCAGAGGTAT
GCAGAGATATAATCGCCTGAAAGACATGGATTGCGCAGAGGGACTGTTCT
TGTTAGGCCATTACTACCCAACATGCCCTGAACCAGAGTTGACTATGGGA
ACTGACAGCCATGCTGATAGTAGCTTCCTTACTGTGCTCCTACAAGACAG
ACTTGGTGGCCTCCAAGTCCTCCATGAAAATGAATGGGTCAATGTTACAC
CCATTTATGGAGCTCTAGTGGTAAATCTCGGAGACATGATGCAGCTGATT
TCCAATGACAAGTTTAAGAGCGTGAATCACAGAGTTCTTGCTAAAGATGT
TGGTCCACGAGTGTCTGTGGCATGTTTCTTCAGATCACATTTTCAATCAG
AGAAAGCAAGGCGTTATGGGCCAATCAACGAGTTACTCTCAGAAGAGAAC
CCGCCAATATACAAGGAAATCACTGTGAAAGAGTACCTGTCACACAGTTA
CTCAAT
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