CX077943

Overview
NameCX077943
Unique NameCX077943
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.817e-18
Identity = 41/95 (43.16%), Postives = 61/95 (64.21%), Query Frame = 1
Query:  400 LLGHYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHE--NEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACF 678
            +L +YYPTCP+P+LT+G   H D   +T+LLQD +GGLQ   +    W+ V P+ GA VVNLGD    +SN +F++ +H+ +      R+S+A F
Sbjct:  198 VLINYYPTCPQPDLTLGVRRHTDPGTITILLQDMVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFRNADHQAVVNSTSSRLSIATF 292          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.817e-18
Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = 1
Query:  409 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHE--NEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACF 678
            +YYP CP+P+LT+G   H D   +T+LLQD++GGLQ   +  N W+ V P+ GA VVNLGD    +SN +FK+ +H+ +      R+S+A F
Sbjct:  199 NYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGNTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATF 290          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.817e-18
Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = 1
Query:  409 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHEN--EWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACF 678
            +YYP CP+P+LT+G   H D   +T+LLQD++GGLQ   +N   W+ V P+ GA VVNLGD    +SN +FK+ +H+ +      R+S+A F
Sbjct:  200 NYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATF 291          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.817e-18
Identity = 41/90 (45.56%), Postives = 66/90 (73.33%), Query Frame = 1
Query:  415 YPTCPEPELTMGTDSHADSSFLTVLLQD-RLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFF 681
            YP CP+PEL  G  +H D+  + +L QD ++ GLQ+L + EW++V P+  ++VVN+GD +++I+N K+KSV HRV+A+  G R+S+A F+
Sbjct:  166 YPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDVPPVRHSIVVNIGDQLEVITNGKYKSVLHRVVAQTDGNRMSIASFY 255          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.374e-18
Identity = 44/126 (34.92%), Postives = 77/126 (61.11%), Query Frame = 1
Query:  415 YPTCPEPELTMGTDSHADSSFLTVLLQD-RLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYL 789
            YP CP+P+L  G  +H D+  + +L QD ++ GLQ+L +  W++V P+  ++VVNLGD +++I+N K+KSV HRV+A+  G R+S+A F+     +        +++   E N  +Y +    +Y+
Sbjct:  162 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGTRMSLASFYNPGNDALIYPAPALVDKEAEEHNKQVYPKFMFDDYM 287          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.100e-18
Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = 1
Query:  409 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHEN--EWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACF 678
            ++YP CPEP+LT+G   H D   +T+LLQD++GGLQ   +N   W+ V P+ GA VVNLGD    +SN +FK+ +H+ +      R+S+A F
Sbjct:  203 NFYPKCPEPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATF 294          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.100e-18
Identity = 40/90 (44.44%), Postives = 65/90 (72.22%), Query Frame = 1
Query:  415 YPTCPEPELTMGTDSHADSSFLTVLLQD-RLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFF 681
            YP CP PEL  G  +H D+  + +L QD ++ GLQ+L + EW++V P+  ++V+N+GD +++I+N K+KSV HRV+A+  G R+S+A F+
Sbjct:  162 YPPCPRPELIKGLRAHTDAGGIILLFQDNKVSGLQLLKDGEWIDVPPMKHSIVINIGDQLEVITNGKYKSVMHRVIAQPDGNRMSIASFY 251          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.100e-18
Identity = 48/133 (36.09%), Postives = 79/133 (59.40%), Query Frame = 1
Query:  415 YPTCPEPELTMGTDSHADSSFLTVLLQD-RLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINEL-------LSEENPPIYKEITVKEYL 789
            YP CP+P+L  G  +H D+  + +L QD ++ GLQ+L + +W++V P+  ++VVNLGD +++I+N K+KSV HRV+A+  G R+S+A F            Y P N+        L EE+  +Y +    +Y+
Sbjct:  162 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGTRMSLASF------------YNPGNDAVIYPAPSLIEESKQVYPKFVFDDYM 282          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.100e-18
Identity = 48/130 (36.92%), Postives = 79/130 (60.77%), Query Frame = 1
Query:  415 YPTCPEPELTMGTDSHADSSFLTVLLQD-RLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPI---NELLSEENPPIYKEITVKEYLS 792
            YP CP+P+L  G  +H D+  + +L QD ++ GLQ+L + EW+ V P+  ++VVN+GD +++I+N K+KSV HRV+A+  G R+S+A F+     S+      P     E   EE   IY +   ++Y++
Sbjct:  166 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDREWIEVPPLRYSIVVNIGDQLEVITNGKYKSVLHRVVAQTDGNRMSIASFYNP--GSDAVIFPAPALVEKEAEEEEKKEIYPKFVFQDYMN 293          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.288e-18
Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = 1
Query:  409 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYL 789
            +YYP CP P+L +G  +H D S++T+L+ + +   QV  +  W +V  I  A++V++GD ++++SN K+KSV HR        R+S   F     + E     GPI  L++E NPP +K    K+Y+
Sbjct:  221 NYYPPCPRPDLALGVVAHTDMSYITLLVPNEV---QVFKDGHWYDVNYIPNAIIVHIGDQVEILSNGKYKSVYHRTTVNKYKTRMSWPVFLEPSSEHE----VGPIPNLINEANPPKFKTKKYKDYV 340          
The following BLAST results are available for this feature:
BLAST of CX077943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
FNSI_PETCR1.817e-1843.16Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
FL3H_MATIN1.817e-1844.57Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_ARATH1.817e-1844.57Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
ACCO1_DORSP1.817e-1845.561-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
ACCO2_SOLLC2.374e-1834.921-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
FL3H_PETHY3.100e-1844.57Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
ACCO_ACTDE3.100e-1844.441-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]
ACCO4_SOLLC3.100e-1836.091-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO2_DORSP3.100e-1836.921-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]
FLS_SOLTU5.288e-1835.43Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_6A01_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6A01-A2-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077943 ID=CX077943; Name=CX077943; organism=Citrus sinensis; type=EST; length=806bp
CGAATTCATTATCCCAATCCTTGACTTGGATGGTGTCAATAAAGATGCCA
TTTCACGGGCCAAGATAGTCAAGCAAGTTCAAAATGCATGCCAGAACTGG
GGGTTCTTTCAAATTGTCAATCATGGAATTCCAGTTAGCATGTTGGATGA
AATGATTGATGGGGTAATTGGATTTCATGAGCAAGATACTGAGGTGAAAA
AGAAGTTCTATACGCGAGATTACCAGAAAAGGAAGGTGCTTTATAATACA
AATTTTGACTTTTATGCAGCACCAGCAGCTAATTGGAGAGATACCCTCAG
TTGCGTTATGGCTCCTAATCCACCTGATCCTGAAGAATTGCCAGAGGTAT
GCAGAGATATAATCGCCTGAAAGACATGGATTGCGCAGAGGGACTGTTCT
TGTTAGGCCATTACTACCCAACATGCCCTGAACCAGAGTTGACTATGGGA
ACTGACAGCCATGCTGATAGTAGCTTCCTTACTGTGCTCCTACAAGACAG
ACTTGGTGGCCTCCAAGTCCTCCATGAAAATGAATGGGTCAATGTTACAC
CCATTTATGGAGCTCTAGTGGTAAATCTCGGAGACATGATGCAGCTGATT
TCCAATGACAAGTTTAAGAGCGTGAATCACAGAGTTCTTGCTAAAGATGT
TGGTCCACGAGTGTCTGTGGCATGTTTCTTCAGATCACATTTTCAATCAG
AGAAAGCAAGGCGTTATGGGCCAATCAACGAGTTACTCTCAGAAGAGAAC
CCGCCAATATACAAGGAAATCACTGTGAAAGAGTACCTGTCACACAGTTA
CTCAAT
back to top