CX077943

Overview
NameCX077943
Unique NameCX077943
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.538e-17
Identity = 49/141 (34.75%), Postives = 76/141 (53.90%), Query Frame = 1
Query:  373 DMDCAEGLFLLGHYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHEN-EWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYLS 792
            D    + +  L HY P CPEP+  MG  +H DS+ +T+L Q+   GLQV  ++  WV   P+ G+LVVN+GD++ +++N  F SV HR     V  R S+A      +         P+ +L+     P+Y  +T K+YL+
Sbjct:  197 DFQGTQAVIQLNHY-PKCPEPDRAMGLAAHTDSTLMTILYQNNTAGLQVFRDDVGWVTAPPVPGSLVVNVGDLLHILTNGIFPSVLHRARVNHVRSRFSMAYL----WGPPSDIMISPLPKLVDPLQSPLYPSLTWKQYLA 332          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.538e-17
Identity = 47/126 (37.30%), Postives = 72/126 (57.14%), Query Frame = 1
Query:  409 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEY 786
            +YYP CP P+L +G  +H D S +TVL+ + + GLQV  +  W +   I  AL+V++GD ++++SN K+KSV HR        R+S   F     +       GPI +L++EENP  +K    K+Y
Sbjct:  204 NYYPPCPRPDLALGV-AHTDMSAITVLVPNEVPGLQVYKDGHWYDCKYIPNALIVHIGDQVEIMSNGKYKSVYHRTTVNKEKTRMSWPVF----LEPPPDHEVGPIPKLVNEENPAKFKTKKYKDY 324          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.538e-17
Identity = 42/91 (46.15%), Postives = 65/91 (71.43%), Query Frame = 1
Query:  415 YPTCPEPELTMGTDSHADSSFLTVLLQD-RLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGP-RVSVACFF 681
            YP CP P+L  G  +H D+  + +L QD ++ GLQ+L + EWV+V P+  ++VVNLGD +++I+N K+KSV HRVL++  G  R+S+A F+
Sbjct:  162 YPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNGKYKSVEHRVLSQTDGEGRMSIASFY 252          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.009e-17
Identity = 47/155 (30.32%), Postives = 86/155 (55.48%), Query Frame = 1
Query:  337 IARGMQRYNRLKDMDCAEGLFLLG--HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYLSH 795
            I  G++     K++   E L L    +YYP CP+PEL +G ++H D S LT +L + + GLQ+ +E +WV    +  ++++++GD ++++SN K+KS+ HR +      R S A F     +    +   P+ E ++E  PP +   T  ++++H
Sbjct:  193 IGLGLEEGRLEKEVGGMEDLLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGQWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGVVNKEKVRFSWAIFCEPPKEKIILK---PLPETVTEAEPPRFPPRTFAQHMAH 344          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.009e-17
Identity = 42/126 (33.33%), Postives = 72/126 (57.14%), Query Frame = 1
Query:  409 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEY 786
            +YYP CP P+L +G  +H D S +T+L+ + + GLQV  ++ W +   I  A++V++GD +  +SN ++K+V HR        R+S   F     +  + +  GP+ EL  ++NPP +K    K+Y
Sbjct:  204 NYYPPCPRPDLALGVPAHTDLSGITLLVPNEVPGLQVFKDDHWFDAEYIPSAVIVHIGDQILRLSNGRYKNVLHRTTVDKEKTRMSWPVF----LEPPREKIVGPLPELTGDDNPPKFKPFAFKDY 325          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.009e-17
Identity = 40/92 (43.48%), Postives = 58/92 (63.04%), Query Frame = 1
Query:  409 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHE--NEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACF 678
            +YYP CP+P LT+G   H D   +T+LLQD++GGLQ   +    W+ V P+ GA VVNLGD    +SN +FK+ +H+ +      R+S+A F
Sbjct:  201 NYYPKCPQPNLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRMSIATF 292          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.009e-17
Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = 1
Query:  409 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHE--NEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACF 678
            +YYP CP+P+LT+G   H D   +T+LLQD++GGLQ   +    W+ V P+ GA VVNLGD    +SN +FK+ +H+ +      R+S+A F
Sbjct:  201 NYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVPGAFVVNLGDHGHFLSNGRFKNADHQAVVNSECSRLSIATF 292          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.009e-17
Identity = 47/127 (37.01%), Postives = 80/127 (62.99%), Query Frame = 1
Query:  415 YPTCPEPELTMGTDSHADSSFLTVLLQD-RLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGP-INELLSEENPPIYKEITVKEYL 789
            YP CP+P+L  G  +H D+  + +L QD ++ GLQ+L + +W++V P+  ++VVNLGD +++I+N K+KSV HRV+ +  G R+S+A F+     S+      P + E  +EE+  IY +    +Y+
Sbjct:  162 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVITNGKYKSVMHRVITQTDGTRMSLASFYNP--GSDAVIFPAPTLVEKEAEESKAIYPKFVFDDYM 286          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.427e-17
Identity = 44/127 (34.65%), Postives = 76/127 (59.84%), Query Frame = 1
Query:  415 YPTCPEPELTMGTDSHADSSFLTVLLQD-RLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGP-RVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYL 789
            YP CP+P+L  G  +H D+  + +L QD ++ GLQ+L +  W++V P+  A+VVNLGD +++I+N ++KSV HRVL +  G  R+S+A F+     +        + +   EE   +Y +   ++Y+
Sbjct:  162 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGNWIDVPPMRHAIVVNLGDQLEVITNGRYKSVMHRVLTQTSGTGRMSIASFYNPGSDAVIYPAPALVEKDQDEEKKEVYPKFVFEDYM 288          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.476e-17
Identity = 40/92 (43.48%), Postives = 58/92 (63.04%), Query Frame = 1
Query:  409 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHE--NEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACF 678
            ++YP CP+P+LT+G   H D   +T+LLQD +GGLQ   +    W+ V PI GA VVNLGD    +SN +FK+ +H+ +      R+S+A F
Sbjct:  203 NFYPRCPQPDLTLGLKRHTDPGTITLLLQDLVGGLQATRDGGKNWITVQPISGAFVVNLGDHGHFMSNGRFKNADHQAVVNGESSRLSIATF 294          
The following BLAST results are available for this feature:
BLAST of CX077943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
G3OX2_ARATH1.538e-1734.75Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]
FLS_EUSGR1.538e-1737.30Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
ACCO1_ARATH1.538e-1746.151-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
LDOX_PETHY2.009e-1730.32Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
FLS1_ARATH2.009e-1733.33Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
FL3H_PETCR2.009e-1743.48Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
FL3H_DIACA2.009e-1743.48Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
ACCO_TOBAC2.009e-1737.011-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO1_CUCME3.427e-1734.651-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
FL3H_HORVU4.476e-1743.48Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_6A01_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6A01-A2-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077943 ID=CX077943; Name=CX077943; organism=Citrus sinensis; type=EST; length=806bp
CGAATTCATTATCCCAATCCTTGACTTGGATGGTGTCAATAAAGATGCCA
TTTCACGGGCCAAGATAGTCAAGCAAGTTCAAAATGCATGCCAGAACTGG
GGGTTCTTTCAAATTGTCAATCATGGAATTCCAGTTAGCATGTTGGATGA
AATGATTGATGGGGTAATTGGATTTCATGAGCAAGATACTGAGGTGAAAA
AGAAGTTCTATACGCGAGATTACCAGAAAAGGAAGGTGCTTTATAATACA
AATTTTGACTTTTATGCAGCACCAGCAGCTAATTGGAGAGATACCCTCAG
TTGCGTTATGGCTCCTAATCCACCTGATCCTGAAGAATTGCCAGAGGTAT
GCAGAGATATAATCGCCTGAAAGACATGGATTGCGCAGAGGGACTGTTCT
TGTTAGGCCATTACTACCCAACATGCCCTGAACCAGAGTTGACTATGGGA
ACTGACAGCCATGCTGATAGTAGCTTCCTTACTGTGCTCCTACAAGACAG
ACTTGGTGGCCTCCAAGTCCTCCATGAAAATGAATGGGTCAATGTTACAC
CCATTTATGGAGCTCTAGTGGTAAATCTCGGAGACATGATGCAGCTGATT
TCCAATGACAAGTTTAAGAGCGTGAATCACAGAGTTCTTGCTAAAGATGT
TGGTCCACGAGTGTCTGTGGCATGTTTCTTCAGATCACATTTTCAATCAG
AGAAAGCAAGGCGTTATGGGCCAATCAACGAGTTACTCTCAGAAGAGAAC
CCGCCAATATACAAGGAAATCACTGTGAAAGAGTACCTGTCACACAGTTA
CTCAAT
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