CX077943

Overview
NameCX077943
Unique NameCX077943
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.949e-16
Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 1
Query:  409 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHE--NEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYL 789
            ++YP CP+P+  +G  +H DS F T +LQ  + GLQ+     + WV V  + GA+VVN+GD+ Q+++N +F SV HR +      R+S+  F       + A    P+ E L+   P  Y+ +T  EY+
Sbjct:  212 NWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSDRISLGYFLGPPAHVKVA----PLREALA-GTPAAYRAVTWPEYM 335          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.949e-16
Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 1
Query:  409 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHE--NEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYL 789
            ++YP CP+P+  +G  +H DS F T +LQ  + GLQ+     + WV V  + GA+VVN+GD+ Q+++N +F SV HR +      R+S+  F       + A    P+ E L+   P  Y+ +T  EY+
Sbjct:  212 NWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSDRISLGYFLGPPAHVKVA----PLREALA-GTPAAYRAVTWPEYM 335          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: G2OX1_PEA (Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.949e-16
Identity = 53/149 (35.57%), Postives = 81/149 (54.36%), Query Frame = 1
Query:  370 KDMDCAEGLFLLGHYYPTCPE----PELTMGTDSHADSSFLTVLLQDRLGGLQV-LHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYLSHSY 801
            K  DC   LF + HY P CPE     E  +G   H D   +++L  +   G Q+ L +  W++V P + +  +N+GD +Q+++N +FKSV HRVLA  + PR+S+  +F     SEK     P+  L+  +   +YKE T  EY S +Y
Sbjct:  170 KQSDC---LFRVNHY-PACPELAINGENLIGFGEHTDPQIISILRSNNTSGFQISLRDGSWISVPPDHSSFFINVGDSLQVMTNGRFKSVRHRVLANGIDPRLSM-IYFCGPPLSEK---IAPLPSLMKGKE-SLYKEFTWFEYKSSTY 309          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.442e-16
Identity = 35/90 (38.89%), Postives = 60/90 (66.67%), Query Frame = 1
Query:  409 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACF 678
            +YYP CP+PEL +G ++H D S LT +L + + GLQ+ +E +WV    +  ++++++GD ++++SN K+KS+ HR L      R+S A F
Sbjct:  221 NYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGLVNKEKVRISWAVF 310          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.440e-15
Identity = 46/127 (36.22%), Postives = 68/127 (53.54%), Query Frame = 1
Query:  409 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYL 789
            ++YP C  P+LT+GT  H D S LT+L QD + GLQV  +N+W ++ P   A VVN+GD    +SN  FKS  HR +      R S+A F       +K +   P +++L +     Y + T   +L
Sbjct:  228 NHYPPCQTPDLTLGTGPHCDPSSLTILHQDHVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVNRESARKSMAFF----LCPKKDKVVKPPSDILEKMKTRKYPDFTWSMFL 350          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.208e-15
Identity = 43/127 (33.86%), Postives = 68/127 (53.54%), Query Frame = 1
Query:  409 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYL 789
            +YYP CP P+L +G  +H D S +T+L+ + + GLQ   +  W +V  I  ALV+++GD M+++SN K+ SV HR        R+S   F     +       GP  +L++  N P YK     +Y+
Sbjct:  206 NYYPPCPRPDLALGVVAHTDMSTVTILVPNDVQGLQACKDGRWYDVKYIPNALVIHIGDQMEIMSNGKYTSVLHRTTVNKDKTRISWPVF----LEPPADHVVGPHPQLVNAVNQPKYKTKKYGDYV 328          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.146e-15
Identity = 40/127 (31.50%), Postives = 70/127 (55.12%), Query Frame = 1
Query:  409 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYL 789
            ++YP  P  +   G + H D + LT+++ + + GLQV  ++ W+ V  I  A++VN+GD + ++SN K+K+V H+        R+S        +        GP+ EL SE++PP +K I  K+Y+
Sbjct:  158 NHYPPYPHSDSFNGLEPHTDINGLTLIITNEIPGLQVFKDDHWIEVEYIPSAIIVNIGDQIMMLSNGKYKNVLHKTTVDKEKTRMSWPVLVSPTYDMV----VGPLPELTSEDDPPKFKPIAYKDYV 280          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.334e-15
Identity = 43/106 (40.57%), Postives = 67/106 (63.21%), Query Frame = 1
Query:  388 EGLFL-LGHYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSE 702
            E  FL L  Y+P+    E+  G   H D+SFLT+L QD++GGL++ +  +W++V P   AL VN+GDM Q +SN  ++SV HRV++     R+S+A F   + ++E
Sbjct:  192 ENSFLRLNKYHPSVFGSEV-FGLVPHTDTSFLTILSQDQIGGLELENNGQWISVKPCLEALTVNIGDMFQALSNGVYQSVRHRVISPANIERMSIAFFVCPYLETE 296          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.632e-14
Identity = 42/119 (35.29%), Postives = 72/119 (60.50%), Query Frame = 1
Query:  445 MGTDSHADSSFLTVLLQ-DRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYLSHS 798
            +G   H+D++ LT+L+Q + + GL +  + +WV + PI GA VVN+GD+++++SN  +KS+ HR +      R+S+A F       E   + GP+ +L+ +EN   YK I  ++YL  S
Sbjct:  223 LGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAFVVNIGDVIEIMSNGIYKSIEHRAVINTDKERLSIAAF----HDPEYGTKIGPLPDLV-KENGVKYKTIDYEDYLIRS 336          
BLAST of CX077943 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 7.901e-14
Identity = 44/140 (31.43%), Postives = 73/140 (52.14%), Query Frame = 1
Query:  409 HYYPTCPEPEL-------TMGTDSHADSSFLTVLLQDRLGGLQV-LHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYLSHSYS 804
            ++YP CP            +G   H D   ++VL  +   GLQ+ L++  W++V P + +   N+GD +Q+++N +FKSV HRVLA     RVS+  F          +R  P+  L+  E+  +Y+E T  EY + +Y+
Sbjct:  173 NHYPPCPLSNKKTNGGKNVIGFGEHTDPQIISVLRSNNTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNGRFKSVRHRVLANCKKSRVSMIYFAGPSL----TQRIAPLTCLIDNEDERLYEEFTWSEYKNSTYN 308          
The following BLAST results are available for this feature:
BLAST of CX077943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
G3O22_WHEAT4.949e-1634.88Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aes... [more]
G3O21_WHEAT4.949e-1634.88Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aes... [more]
G2OX1_PEA4.949e-1635.57Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum ... [more]
LDOX_VITVI8.442e-1638.89Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
GAOX2_ARATH1.440e-1536.22Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
FLS_MALDO3.208e-1533.86Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]
FLS_MATIN7.146e-1531.50Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
G2OX7_ARATH9.334e-1540.57Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis th... [more]
NCS1_COPJA4.632e-1435.29S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
G2OX1_ARATH7.901e-1431.43Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_6A01_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6A01-A2-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077943 ID=CX077943; Name=CX077943; organism=Citrus sinensis; type=EST; length=806bp
CGAATTCATTATCCCAATCCTTGACTTGGATGGTGTCAATAAAGATGCCA
TTTCACGGGCCAAGATAGTCAAGCAAGTTCAAAATGCATGCCAGAACTGG
GGGTTCTTTCAAATTGTCAATCATGGAATTCCAGTTAGCATGTTGGATGA
AATGATTGATGGGGTAATTGGATTTCATGAGCAAGATACTGAGGTGAAAA
AGAAGTTCTATACGCGAGATTACCAGAAAAGGAAGGTGCTTTATAATACA
AATTTTGACTTTTATGCAGCACCAGCAGCTAATTGGAGAGATACCCTCAG
TTGCGTTATGGCTCCTAATCCACCTGATCCTGAAGAATTGCCAGAGGTAT
GCAGAGATATAATCGCCTGAAAGACATGGATTGCGCAGAGGGACTGTTCT
TGTTAGGCCATTACTACCCAACATGCCCTGAACCAGAGTTGACTATGGGA
ACTGACAGCCATGCTGATAGTAGCTTCCTTACTGTGCTCCTACAAGACAG
ACTTGGTGGCCTCCAAGTCCTCCATGAAAATGAATGGGTCAATGTTACAC
CCATTTATGGAGCTCTAGTGGTAAATCTCGGAGACATGATGCAGCTGATT
TCCAATGACAAGTTTAAGAGCGTGAATCACAGAGTTCTTGCTAAAGATGT
TGGTCCACGAGTGTCTGTGGCATGTTTCTTCAGATCACATTTTCAATCAG
AGAAAGCAAGGCGTTATGGGCCAATCAACGAGTTACTCTCAGAAGAGAAC
CCGCCAATATACAAGGAAATCACTGTGAAAGAGTACCTGTCACACAGTTA
CTCAAT
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