CX077942

Overview
NameCX077942
Unique NameCX077942
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX077942 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.953e-17
Identity = 40/92 (43.48%), Postives = 58/92 (63.04%), Query Frame = -2
Query:  406 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHE--NEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACF 675
            ++YP CP+P+LT+G   H D   +T+LLQD +GGLQ   +    W+ V PI GA VVNLGD    +SN +FK+ +H+ +      R+S+A F
Sbjct:  203 NFYPRCPQPDLTLGLKRHTDPGTITLLLQDLVGGLQATRDGGKNWITVQPISGAFVVNLGDHGHFMSNGRFKNADHQAVVNGESSRLSIATF 294          
BLAST of CX077942 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.468e-17
Identity = 39/92 (42.39%), Postives = 59/92 (64.13%), Query Frame = -2
Query:  406 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHE--NEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACF 675
            ++YP CP+P+LT+G   H D   +T+LLQD++GGLQ   +    W+ V P+ GA VVNLGD    +SN +FK+ +H+ +      R+S+A F
Sbjct:  201 NFYPQCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNHSRLSIATF 292          
BLAST of CX077942 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.468e-17
Identity = 46/128 (35.94%), Postives = 75/128 (58.59%), Query Frame = -2
Query:  295 YYPTCPEPELTMGTDSHADSSFLTVLLQD-RLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPP-IYKEITVKEYL 672
            +YP CP  +L  G  +H D+  + +L QD ++GGLQ+L +  W++V P+  A+V+N GD ++++SN ++KS  HRVLA   G R S+A F+    ++  A   G   E   E  PP +Y +    +Y+
Sbjct:  161 HYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQMLKDGRWIDVQPLADAIVINTGDQIEVLSNGRYKSAWHRVLATSHGNRRSIASFYNPSLKATIAPAAGAATE---EAAPPALYPKFLFGDYM 285          
BLAST of CX077942 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.468e-17
Identity = 38/90 (42.22%), Postives = 66/90 (73.33%), Query Frame = -2
Query:  403 YPTCPEPELTMGTDSHADSSFLTVLLQD-RLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFF 669
            YP CP+ +L  G  +H D+  + +L QD ++ GLQ+L +++W++V P+  ++V+NLGD +++I+N K+KSV HRV+A+  G R+S+A F+
Sbjct:  162 YPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVVAQTDGTRMSIASFY 251          
BLAST of CX077942 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.468e-17
Identity = 37/97 (38.14%), Postives = 67/97 (69.07%), Query Frame = -2
Query:  382 YPTCPEPELTMGTDSHADSSFLTVLLQD-RLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSE 669
            YP CP+PE+  G  +H D+  + +L QD ++ GLQ+L + +W++V P+  ++V+NLGD +++I+N ++KS+ HRV+ +  G R+S+A F+     +E
Sbjct:  165 YPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHRVVTQKEGNRMSIASFYNPGSDAE 261          
BLAST of CX077942 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.448e-17
Identity = 48/127 (37.80%), Postives = 65/127 (51.18%), Query Frame = -2
Query:  295 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYL 675
            +YYP C  P  T+GT  H D + LT+L QD +GGLQV  E  W ++ P   A VVN+GD    +SN ++KS  HR +     PR S+A F       E  +   P   L+   NP  Y + T +  L
Sbjct:  207 NYYPPCQRPMETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKVPRKSLAFF----LCPEMDKVVAPPGTLVDAANPRAYPDFTWRSLL 329          
BLAST of CX077942 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.103e-16
Identity = 48/127 (37.80%), Postives = 65/127 (51.18%), Query Frame = -2
Query:  295 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYL 675
            +YYP C  P  T+GT  H D + LT+L QD +GGLQV  E  W ++ P   A VVN+GD    +SN ++KS  HR +     PR S+A F       E  +   P   L+   NP  Y + T +  L
Sbjct:  207 NYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFF----LCPEMDKVVAPPGTLVDASNPRAYPDFTWRSLL 329          
BLAST of CX077942 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.441e-16
Identity = 48/127 (37.80%), Postives = 65/127 (51.18%), Query Frame = -2
Query:  295 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYL 675
            +YYP C  P  T+GT  H D + LT+L QD +GGLQV  E  W ++ P   A VVN+GD    +SN ++KS  HR +     PR S+A F       E  +   P   L+   NP  Y + T +  L
Sbjct:  207 NYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFF----LCPEMDKVVAPPGTLVDAANPRAYPDFTWRSLL 329          
BLAST of CX077942 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.458e-16
Identity = 45/127 (35.43%), Postives = 72/127 (56.69%), Query Frame = -2
Query:  295 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHENEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYL 675
            +YYP CP+PEL +G ++H D S L+ +L + + GLQVLH   WV      G ++V++GD ++++SN ++ SV HR L      R+S   F      S       P+ EL++E +P  +   T K++L
Sbjct:  237 NYYPRCPQPELAVGVEAHTDVSALSFILHNGVPGLQVLHGARWVTARHEPGTIIVHVGDALEILSNGRYTSVLHRGLVNREAVRISWVVFCEPPPDSVLLH---PLPELVTEGHPARFTPRTFKQHL 360          
BLAST of CX077942 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.210e-16
Identity = 48/143 (33.57%), Postives = 75/143 (52.45%), Query Frame = -2
Query:  253 HYYPTCPEPELTMGTDSHADSSFLTVLLQDRLGGLQVLHE--NEWVNVTPIYGALVVNLGDMMQLISNDKFKSVNHRVLAKDVGPRVSVACFFRSHFQSEKARRYGPINELLSEENPPIYKEITVKEYLSHSYSIGLDGTSPL 675
            ++YP CP+P+  +G  +H DS F T +LQ  + GLQ+     + WV V  + GA+VVN+GD+ Q+++N +F SV HR +      R+S+  F       + A    P+ E L+   P  Y+ +T  EY+         G S L
Sbjct:  212 NWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRESDRISLGYFLGPPAHVKVA----PLREALA-GTPAAYRAVTWPEYMGVRKKAFTTGASAL 349          
The following BLAST results are available for this feature:
BLAST of CX077942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
FL3H_HORVU4.953e-1743.48Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
FL3H_VITVI6.468e-1742.39Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
ACCO_MUSAC6.468e-1735.941-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
ACCO_DIOKA6.468e-1742.221-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO1_BRAJU6.468e-1738.141-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
GAO1B_WHEAT8.448e-1737.80Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]
GAO1A_WHEAT1.103e-1637.80Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN... [more]
GAO1D_WHEAT1.441e-1637.80Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]
LDOX_MAIZE2.458e-1635.43Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
G3O23_WHEAT3.210e-1633.57Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aes... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_6A01_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6A01-A2-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077942 ID=CX077942; Name=CX077942; organism=Citrus sinensis; type=EST; length=859bp
CTTTTTTTTTAGGTCTTTAACAGAAAAAATATTTCCTTCTTTCTTATTTG
TTTCATTTCTTGTTAAAAGAGTTTACATGCAATTGCCGAGCTCAAGCACT
AAGTGCCGACTTGCCTTCAAGCCTATATATTGAGCAGGATTATTCTAAAA
CTTCTTATGCATTTCAACCAATCATTCAATTTCAAATCTCAAGCAAAAGT
TATTAACTGGAATTATGCAGGCACGTCGAATACTTCACAGTTTAAAATGG
TCGAGTGGAGAGGTACCGTCAAGCCCTATTGAGTAACTGTGTGACAGGTA
CTCTTTCACAGTGATTTCCTTGTATATTGGCGGGTTCTCTTCTGAGAGTA
ACTCGTTGATTGGCCCATAACGCCTTGCTTTCTCTGATTGAAAATGTGAT
CTGAAGAAACATGCCACAGACACTCGTGGACCAACATCTTTAGCAAGAAC
TCTGTGATTCACGCTCTTAAACTTGTCATTGGAAATCAGCTGCATCATGT
CTCCGAGATTTACCACTAGAGCTCCATAAATGGGTGTAACATTGACCCAT
TCATTTTCATGGAGGACTTGGAGGCCACCAAGTCTGTCTTGTAGGAGCAC
AGTAAGGAAGCTACTATCAGCATGGCTGTCAGTTCCCATAGTCAACTCTG
GTTCAGGGCATGTTGGGTAGTAATGGCCTAACAAGAACAGTCCCTCTGCG
CAATCCATGTCTTTCAGGCGATTATATCTCTGCATACCTCTGGCAATTCT
TCAGGATCAGGTGGATTAGGAGCCATAACGCAACTGAGGGTATCTCTCCA
ATTAGCTGCTGGTGCTGCATAAAAGTCAAAATTTGTATTATAAAGCACCT
TCCTTTTCT
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