CX077933

Overview
NameCX077933
Unique NameCX077933
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX077933 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.621e-19
Identity = 56/164 (34.15%), Postives = 91/164 (55.49%), Query Frame = -3
Query:  297 KLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVK---IPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLL----YPSYYS--FQDY 761
            ++ +KL   +   LG+E   +K A  G+    +  K+  YP CP P+L  G+  HTD   + +L+ ++ VPGL+ FKD  W+    IP    N + ++ GDQ+E+LSNG+Y++ LHR    K+ +R+S   F  P  D ++ P  +L+     P Y +  F+DY
Sbjct:  168 EVVDKLFTYLSLGLGVEGGVLKEAAGGDDIEYM-LKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIP----NALVIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDY 325          
BLAST of CX077933 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.625e-19
Identity = 61/145 (42.07%), Postives = 82/145 (56.55%), Query Frame = -3
Query:  342 QLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDG--EWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISP 770
            +L+ LA  L  ++ E +GLE   +  A        V   V  YP+CP P+L  GL+ HTD G I LLLQD QV GL+  +DG   W+ + P     + VN GD    LSNGR+++A H+ +     SRLSIATF NP+ DA + P
Sbjct:  164 KLMTLACTLLGVLSEAMGLELEALTKACVDMDQKIV---VNYYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDGGKTWITVQPVPGAFV-VNLGDHGHFLSNGRFKNADHQAVVNSECSRLSIATFQNPSPDATVYP 303          
BLAST of CX077933 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.958e-19
Identity = 52/139 (37.41%), Postives = 79/139 (56.83%), Query Frame = -3
Query:  348 LAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWV--KIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAII 758
            LA K+ + +   LGLE   ++    G +   +  K+  YP+CP PEL  G+  HTD   +  +L +  VPGL+ F +G+WV  K  P   ++I ++ GD +E+LSNG+Y+S LHR +  K   R+S A F  P  D I+
Sbjct:  179 LATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTAKCVP---DSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIV 313          
BLAST of CX077933 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.699e-18
Identity = 55/148 (37.16%), Postives = 81/148 (54.73%), Query Frame = -3
Query:  327 KLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPA---NDAIISPAIKLL 761
            KL   L EL+ E LGL++SY+K+         +      YP CP PEL  G  +HTD G + +LLQDD + GL+      WV +PP+  + + VN GD +++LSN +Y S  HR +    GSR+SI  F+  +   +  +  P  +LL
Sbjct:  185 KLGFTLLELLSEGLGLDRSYLKDYMDCFH---LFCSCNYYPPCPQPELTMGTIQHTDIGFVTILLQDD-MGGLQVLHQNHWVDVPPTPGSLV-VNIGDFLQLLSNDKYLSVEHRAISNNVGSRMSITCFFGESPYQSSKLYGPITELL 327          
BLAST of CX077933 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.784e-18
Identity = 59/145 (40.69%), Postives = 81/145 (55.86%), Query Frame = -3
Query:  342 QLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDG--EWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISP 770
            +L+ L+  L  ++ E +GLE   +  A        V   V  YP+CP P+L  GL+ HTD G I LLLQD  V GL+  +DG   W+ + P  +    VN GD    +SNGR+++A H+ +     SRLSIATF NPA DA + P
Sbjct:  166 RLMGLSCNLMGVLSEAMGLETEALAKACVDMDQKVV---VNFYPRCPQPDLTLGLKRHTDPGTITLLLQD-LVGGLQATRDGGKNWITVQPI-SGAFVVNLGDHGHFMSNGRFKNADHQAVVNGESSRLSIATFQNPAPDARVWP 305          
BLAST of CX077933 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.942e-18
Identity = 52/146 (35.62%), Postives = 81/146 (55.48%), Query Frame = -3
Query:  327 LAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEW--VKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLL 758
            + +KL E +   +GLEK  +K A  G+    +  K+  YP CP P+L  G+  HTD   I +L+ ++ V GL+  KD  W  VK  P   N + ++ GDQ+E++SNG+Y+S  HR    K+ +R+S   F  P  + +  P  KL+
Sbjct:  171 VVDKLFEALSLGIGLEKHELKKASGGDDLIYM-LKINYYPPCPRPDLALGVVAHTDMSAITILVPNE-VQGLQVHKDDHWYDVKYIP---NALIIHIGDQIEIMSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPPELLTGPISKLI 311          
BLAST of CX077933 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.455e-18
Identity = 54/153 (35.29%), Postives = 78/153 (50.98%), Query Frame = -3
Query:  312 QLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLLYPSYY 770
            ++ +L+  + EL+  +LG+E+ Y +  F+     S   +   YP CP PE   G   H D   + +LLQDD V GLE   DGEW  + P     + +N GD    LSNGRY+S LHR +  +   R S+A F  P  D ++ P      P +Y
Sbjct:  195 EMKELSLTIMELLELSLGVERGYYREFFADS---SSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDD-VGGLEVLVDGEWRPVSPVPGAMV-INIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSAATPQHY 342          
BLAST of CX077933 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.455e-18
Identity = 54/153 (35.29%), Postives = 78/153 (50.98%), Query Frame = -3
Query:  312 QLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLLYPSYY 770
            ++ +L+  + EL+  +LG+E+ Y +  F+     S   +   YP CP PE   G   H D   + +LLQDD V GLE   DGEW  + P     + +N GD    LSNGRY+S LHR +  +   R S+A F  P  D ++ P      P +Y
Sbjct:  195 EMKELSLTIMELLELSLGVERGYYREFFADS---SSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDD-VGGLEVLVDGEWRPVSPVPGAMV-INIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSAATPQHY 342          
BLAST of CX077933 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.455e-18
Identity = 50/145 (34.48%), Postives = 80/145 (55.17%), Query Frame = -3
Query:  330 LAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIP--PSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKL 758
            L+EK+ E + E LGL +  IK       G      +  YP  P+ +   GL  HTD  G+ L++ ++ +PGL+ FKD  W+++   PS    I VN GDQ+ +LSNG+Y++ LH+   +K  +R+S     +P  D ++ P  +L
Sbjct:  126 LSEKIMEWLSEGLGLGREAIKEV----NGCWYVMNINHYPPYPHSDSFNGLEPHTDINGLTLIITNE-IPGLQVFKDDHWIEVEYIPS---AIIVNIGDQIMMLSNGKYKNVLHKTTVDKEKTRMSWPVLVSPTYDMVVGPLPEL 262          
BLAST of CX077933 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.101e-17
Identity = 54/144 (37.50%), Postives = 79/144 (54.86%), Query Frame = -3
Query:  327 LAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLL 758
            L+ K+ EL+  +LG+E+ Y K  F  E   S+  ++  YPQC  PEL  G   H D   + +L QD QV GL+ F D +W  IPP+ +  + VN GD    L+NGRY+S LHR +      R + A F  P  + ++ P  +L+
Sbjct:  196 LSLKIMELLGMSLGVERRYFKEFF--EDSDSI-FRLNYYPQCKQPELALGTGPHCDPTSLTILHQD-QVGGLQVFVDNKWQSIPPNPHAFV-VNIGDTFMALTNGRYKSCLHRAVVNSERERKTFAFFLCPKGEKVVKPPEELV 334          
The following BLAST results are available for this feature:
BLAST of CX077933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
FLS_CITUN2.621e-1934.15Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
FL3H_DIACA7.625e-1942.07Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
LDOX_ARATH9.958e-1937.41Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
ACCH3_SOLLC1.699e-1837.161-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FL3H_HORVU3.784e-1840.69Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
FLS_PETCR4.942e-1835.62Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
GAOX2_ORYSJ6.455e-1835.29Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]
GAOX2_ORYSI6.455e-1835.29Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
FLS_MATIN6.455e-1834.48Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
GAOX3_ARATH1.101e-1737.50Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_5H07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-5H07-O13-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077933 ID=CX077933; Name=CX077933; organism=Citrus sinensis; type=EST; length=778bp
TATAACCTTATTAGTATATTCATCAGTATAGATGAATGATAAACATAGGA
AATAGAAAGTGTCATTTTCATCTCCTTTAGAATTTAACAACATAACTCTT
TATGCTAGTTAAGAATTTAAAGAACATATTCTATGCAGAAAACATAACAG
CATCAAACTGATGATCCCTTACATAGCAATCATTTAAGTAGTCGATAATT
TTATGAAAGGAGGATCTGGTGTCCATTGGCAATCTCCTTCATGGATTCAA
GTCTAGGGACCTTGTCTGAGAACTTGGTGGTGCCGTAAAGCTTCAGGTAG
TCTTGAAAACTGTAGTAACTGGGGTATAAGAGTTTGATAGCTGGAGAAAT
AATAGCATCGTTAGCAGGATTATAGAAGGTTGCAATGGAGAGTCTGCTTC
CATTCTTTTCAGGCATGACGCGGTGCAAAGCACTTTGATACCTCCCATTA
CTCAAAACTTCCACTTGGTCACCTGTGTTAACAAATATGGTGTTGTTTCT
GGATGGAGGGATCTTTACCCACTCTCCATCTTTGAAAAATTCAAGACCTG
GAACTTGGTCATCTTGGAGCAAGAGGATGATTCCACCCGCGTCAGTGTGT
TCTCGTAGTCCTCTGACGAGTTCCGGATAAGGACATTGAGGGTATTTTGC
TACTTTTGTCCCCACAGAAGGACCCTTTTCCCCTGAGAATGCATTCTTTA
TGTAACTCTTCTCTAAACCAAGATTCTCACACATGAGCTCAGAAAGCTTC
TCTGCTAGCTTTATTAGTTGAGCTATGT
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