EY702319

Overview
NameEY702319
Unique NameEY702319
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702319 vs. ExPASy Swiss-Prot
Match: ALGD_PSESY (GDP-mannose 6-dehydrogenase OS=Pseudomonas syringae pv. syringae GN=algD PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.023e-17
Identity = 76/265 (28.68%), Postives = 125/265 (47.17%), Query Frame = 2
Query:   80 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ--CRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAAR----VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNS---KGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSKI 847
            ++I   G GYVG      ++ +    EV  VDIS ++I+  N+ + PI EPGL+ ++++    GK L  +TD  + +   D+  + V TP+K  G       +L Y ES  R    V+ D +    IVV  + +P   A  +  IL   S    G+ F +  NPEFL E TAI+D   P   +IG  +   G      L+ +Y     +  I+  ++  AE+ K   N + A +++  N +  + +A G +  +V   V  D  +
Sbjct:    1 MRISIFGLGYVGAVCAGCLSAR--GHEVVGVDISSTKIDLINNGKSPIVEPGLEELLQKGISTGK-LRGTTDFAEAIRATDLSMICVGTPSKKNG-----DLELDYIESVCREIGYVLRDKATRHTIVVRSTVLPGTVANVVIPILEDCSGKKAGVDFGVAVNPEFLRESTAIKDYDLPPMTVIGEFDKASGD----VLQSLYEEL--DAPIIRKDIAVAEMIKYTCNVWHATKVTFANEIGNIAKAVGVDGREVMDVVCQDKAL 251          
BLAST of EY702319 vs. ExPASy Swiss-Prot
Match: ALGD_PSESM (GDP-mannose 6-dehydrogenase OS=Pseudomonas syringae pv. tomato GN=algD PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.157e-17
Identity = 75/265 (28.30%), Postives = 125/265 (47.17%), Query Frame = 2
Query:   80 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ--CRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAAR----VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNS---KGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSKI 847
            ++I   G GYVG      ++ +    +V  VDIS ++I+  N+ + PI EPGL+ ++++    GK L  +TD  + +   D+  + V TP+K  G       +L Y ES  R    V+ D +    IVV  + +P   A  +  IL   S    G+ F +  NPEFL E TAI+D   P   +IG  +   G      L+ +Y     +  I+  ++  AE+ K   N + A +++  N +  + +A G +  +V   V  D  +
Sbjct:    1 MRISIFGLGYVGAVCAGCLSAR--GHDVVGVDISSTKIDLINNGKSPIVEPGLEELLQKGLATGK-LRGTTDFAEAIRATDLSMICVGTPSKKNG-----DLELDYIESVCREIGYVLRDKNTRHTIVVRSTVLPGTVANVVIPILEDCSGKKAGVDFGVAVNPEFLRESTAIKDYDLPPMTVIGEFDKASGD----VLQSLYEEL--DAPIIRKDIAVAEMIKYTCNVWHATKVTFANEIGNIAKAVGVDGREVMDVVCQDKAL 251          
BLAST of EY702319 vs. ExPASy Swiss-Prot
Match: ALGD_PSESH (GDP-mannose 6-dehydrogenase OS=Pseudomonas syringae pv. phaseolicola GN=algD PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.735e-17
Identity = 75/265 (28.30%), Postives = 125/265 (47.17%), Query Frame = 2
Query:   80 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ--CRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAAR----VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNS---KGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSKI 847
            ++I   G GYVG      ++ +    +V  VDIS ++I+  N+ + PI EPGL+ ++++    GK L  +TD  + +   D+  + V TP+K  G       +L Y ES  R    V+ D +    IVV  + +P   A  +  IL   S    G+ F +  NPEFL E TAI+D   P   +IG  +   G      L+ +Y     +  I+  ++  AE+ K   N + A +++  N +  + +A G +  +V   V  D  +
Sbjct:    1 MRISIFGLGYVGAVCAGCLSAR--GHDVVGVDISSTKIDLINNGKSPIVEPGLEELLQKGISTGK-LRGTTDFAEAIRATDLSMICVGTPSKKNG-----DLELDYIESVCREIGYVLRDKATRHTIVVRSTVLPGTVANVVIPILEDCSGKKAGVDFGVAVNPEFLRESTAIKDYDLPPMTVIGEFDKASGD----VLQSLYEEL--DAPIIRKDIAVAEMIKYTCNVWHATKVTFANEIGNIAKAVGVDGREVMDVVCQDKAL 251          
BLAST of EY702319 vs. ExPASy Swiss-Prot
Match: WECC_SHIFL (UDP-N-acetyl-D-mannosamine dehydrogenase OS=Shigella flexneri GN=wecC PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.149e-16
Identity = 81/252 (32.14%), Postives = 112/252 (44.44%), Query Frame = 2
Query:   86 ICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQC-RGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKF----------QILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANV 808
            I  IG GY+G PT A  A +    +V  VDI+   ++  N  ++ I EP L  VVK    G  L  ST       EAD   ++V TP K          D+TY ESAAR IA V K   +V+ +ST PV + E + + L      + F           I   PE +  G  + +L   DRV+  G  TP        L  ++     E   + TN  +AE+ KL  N+F    I+  N +S +C   G NV
Sbjct:    6 ISVIGLGYIGLPTAAAFASR--QKQVIGVDINQHAVDTINRGEIHIVEPDLASVVKTAVEGGFLRASTTPV----EADAWLIAVPTPFK-----GDHEPDMTYVESAARSIAPVLKKGALVILESTSPVGSTEKMAEWLAEMRPDLTFPQQVGEQADVNIAYCPERVLPGQVMVELIKNDRVI--GGMTPVCSARASELYKIFL----EGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICADQGINV 240          
BLAST of EY702319 vs. ExPASy Swiss-Prot
Match: WECC_ECOLI (UDP-N-acetyl-D-mannosamine dehydrogenase OS=Escherichia coli (strain K12) GN=wecC PE=3 SV=4)

HSP 1 Score: 87.4261 bits (215), Expect = 1.149e-16
Identity = 81/252 (32.14%), Postives = 112/252 (44.44%), Query Frame = 2
Query:   86 ICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQC-RGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKF----------QILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANV 808
            I  IG GY+G PT A  A +    +V  VDI+   ++  N  ++ I EP L  VVK    G  L  ST       EAD   ++V TP K          D+TY ESAAR IA V K   +V+ +ST PV + E + + L      + F           I   PE +  G  + +L   DRV+  G  TP        L  ++     E   + TN  +AE+ KL  N+F    I+  N +S +C   G NV
Sbjct:    6 ISVIGLGYIGLPTAAAFASR--QKQVIGVDINQHAVDTINRGEIHIVEPDLASVVKTAVEGGFLRASTTPV----EADAWLIAVPTPFK-----GDHEPDMTYVESAARSIAPVLKKGALVILESTSPVGSTEKMAEWLAEMRPDLTFPQQVGEQADVNIAYCPERVLPGQVMVELIKNDRVI--GGMTPVCSARASELYKIFL----EGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICADQGINV 240          
BLAST of EY702319 vs. ExPASy Swiss-Prot
Match: WECC_ECO57 (UDP-N-acetyl-D-mannosamine dehydrogenase OS=Escherichia coli O157:H7 GN=wecC PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.149e-16
Identity = 81/252 (32.14%), Postives = 112/252 (44.44%), Query Frame = 2
Query:   86 ICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQC-RGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKF----------QILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANV 808
            I  IG GY+G PT A  A +    +V  VDI+   ++  N  ++ I EP L  VVK    G  L  ST       EAD   ++V TP K          D+TY ESAAR IA V K   +V+ +ST PV + E + + L      + F           I   PE +  G  + +L   DRV+  G  TP        L  ++     E   + TN  +AE+ KL  N+F    I+  N +S +C   G NV
Sbjct:    6 ISVIGLGYIGLPTAAAFASR--QKQVIGVDINQHAVDTINRGEIHIVEPDLASVVKTAVEGGFLRASTTPV----EADAWLIAVPTPFK-----GDHEPDMTYVESAARSIAPVLKKGALVILESTSPVGSTEKMAEWLAEMRPDLTFPQQVGEQADVNIAYCPERVLPGQVMVELIKNDRVI--GGMTPVCSARASELYKIFL----EGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICADQGINV 240          
BLAST of EY702319 vs. ExPASy Swiss-Prot
Match: UDG_ECO11 (UDP-glucose 6-dehydrogenase OS=Escherichia coli O111:H- GN=ugd PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.500e-16
Identity = 77/261 (29.50%), Postives = 120/261 (45.98%), Query Frame = 2
Query:   80 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIVFVSVNTPT----KTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSKIG 850
            +KI   G GYVG     +IA      EV  +DI  +++   N  + PI +  ++  +     K L F    +K+ +  D  +V + TPT    KT              ES  R + D++ +  +V+ KST+PV     +++ L     GI   I  +PEFL EG A+ D  +P R++IG R    G+ A    +      +P    L T+   AE  KL AN +LA R++  N + +  E+ G N  Q+   V  D +IG
Sbjct:    1 MKITISGTGYVGLSNGILIA---QHHEVVALDIVPTKVEMLNQKKSPIVDKEIEEYLAT---KQLNFRATTDKYDAYRDGTYVIIATPTDYDPKTNYFNTSSV------ESVIRDVVDINPNAVMVI-KSTIPVGFTNLLKERL-----GID-NIFFSPEFLREGRALYDNLHPSRIVIGERSERAGRFAALLQEGAVKKDIP---TLFTDSTEAEAIKLFANTYLALRVAYFNELDSYAESLGLNSRQIIEGVCLDPRIG 239          
BLAST of EY702319 vs. ExPASy Swiss-Prot
Match: UDG8_ECOLX (UDP-glucose 6-dehydrogenase OS=Escherichia coli GN=ugd PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.500e-16
Identity = 77/259 (29.73%), Postives = 123/259 (47.49%), Query Frame = 2
Query:   80 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSK--SDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSKIG 850
            +KI   G GYVG     +IA    + EV  +DI  ++++  N  Q PI +  ++  +     K+L F    +K+ +  +  +V + TPT           +     S   VI DV++   + ++V KST+PV   ++I++ L     GI   I S PEFL EG A+ D  +P R++IG R     + A    +      +P    L T+   AE  KL AN +LA R++  N + +  E+ G N  Q+   V  D +IG
Sbjct:    1 MKITISGTGYVGLSNGILIA---QNHEVVALDIVQAKVDMLNKKQSPIVDKEIEEYLAT---KDLNFRATTDKYDAYKNADYVIIATPTDYD-----PKTNYFNTSSVEAVIRDVTEINPNAVMVIKSTIPVGFTKSIKERL-----GIDNLIFS-PEFLREGKALYDNLHPSRIVIGERSERAERFAALLQEGAIKQNIP---TLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAESLGLNTRQIIEGVCLDPRIG 239          
BLAST of EY702319 vs. ExPASy Swiss-Prot
Match: UDG_ECO57 (UDP-glucose 6-dehydrogenase OS=Escherichia coli O157:H7 GN=ugd PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.342e-16
Identity = 78/260 (30.00%), Postives = 121/260 (46.54%), Query Frame = 2
Query:   80 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDK--IVVEKSTVPVKTAEAI-EKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSKIG 850
            +KI   G GYVG     +IA    + EV  +DI  SR+   N    PI +  +   ++  +   + F+  ++K+ +  D  +V + TPT           +     S   VI DV + +   ++V KSTVPV   EA+ +K  T N       I+ +PEFL EG A+ D  +P R++IG R     + A    +      +P    L T+   AE  KL AN +LA R++  N + +  E+ G N  Q+   V  D +IG
Sbjct:    1 MKITISGTGYVGLSNGLLIA---QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDK---IHFNATLDKNEAYRDADYVIIATPTDYD-----PKTNYFNTSSVESVIKDVVEINPYAVMVIKSTVPVGFTEAMHKKYRTEN-------IIFSPEFLREGKALYDNLHPSRIVIGERSERAERFAALLQEGAIKQNIP---TLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAESLGLNSRQIIEGVCLDPRIG 239          
BLAST of EY702319 vs. ExPASy Swiss-Prot
Match: ALGD_AZOVI (GDP-mannose 6-dehydrogenase OS=Azotobacter vinelandii GN=algD PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.342e-16
Identity = 72/264 (27.27%), Postives = 123/264 (46.59%), Query Frame = 2
Query:   80 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAAR----VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNS---KGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSKI 847
            ++I   G GYVG      ++ +    EV  VDIS ++I+  N  + PI EPGL  ++ +  +   L  +T+V + V   ++  + V TP+K  G       +L Y E   R     + D ++   +VV  + +P      +  IL   S    G+ F +  NPEFL E TAI+D   P   +IG  +   G++    L  +YA    +  I+   +  AE+ K   N + A +++  N +  + +A G +  +V   V  D+K+
Sbjct:    1 MRISIFGLGYVGAVCAGCLSGR--GHEVVGVDISAAKIDMINQGKSPIVEPGLGELLAEGVKTGRLRGTTNVTEAVLATELSMLCVGTPSKLNG-----DLELDYIEEVCRQMGSALRDKTERHTVVVRSTVLPGTVHNVVIPILEEFSGKKAGVDFGVAVNPEFLRESTAIKDYNFPPMTVIGELDKASGRR----LASIYAEL--DAPIVRKGIAVAEMIKYTCNVWHATKVTFANEIGNIAKAAGVDGREVMEVVCMDNKL 251          
The following BLAST results are available for this feature:
BLAST of EY702319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALGD_PSESY3.023e-1728.68GDP-mannose 6-dehydrogenase OS=Pseudomonas syringa... [more]
ALGD_PSESM5.157e-1728.30GDP-mannose 6-dehydrogenase OS=Pseudomonas syringa... [more]
ALGD_PSESH6.735e-1728.30GDP-mannose 6-dehydrogenase OS=Pseudomonas syringa... [more]
WECC_SHIFL1.149e-1632.14UDP-N-acetyl-D-mannosamine dehydrogenase OS=Shigel... [more]
WECC_ECOLI1.149e-1632.14UDP-N-acetyl-D-mannosamine dehydrogenase OS=Escher... [more]
WECC_ECO571.149e-1632.14UDP-N-acetyl-D-mannosamine dehydrogenase OS=Escher... [more]
UDG_ECO111.500e-1629.50UDP-glucose 6-dehydrogenase OS=Escherichia coli O1... [more]
UDG8_ECOLX1.500e-1629.73UDP-glucose 6-dehydrogenase OS=Escherichia coli GN... [more]
UDG_ECO573.342e-1630.00UDP-glucose 6-dehydrogenase OS=Escherichia coli O1... [more]
ALGD_AZOVI3.342e-1627.27GDP-mannose 6-dehydrogenase OS=Azotobacter vinelan... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-005-F06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702319 ID=EY702319; Name=EY702319; organism=Citrus sinensis; type=EST; length=880bp
CCACGCGTCCGAGAAACAGTTGTTTTGATTTTGAGAAATCGAAGCTCACT
GAGGTTATATTGATTAGTAAAGGAAAATGGTGAAGATCTGCTGCATCGGT
GCTGGGTATGTTGGGGGGCCGACAATGGCAGTCATTGCACTGAAGTGCCC
ATCCATTGAAGTGGCTGTTGTTGATATCTCTGTGTCTCGGATCAATGCCT
GGAACAGTGACCAGCTCCCCATCTATGAGCCTGGACTTGATGGTGTGGTA
AAGCAGTGCCGAGGGAAGAACCTGTTCTTCAGCACCGATGTTGAGAAGCA
TGTCTCTGAGGCTGATATTGTCTTTGTTTCGGTCAATACCCCAACTAAAA
CTCAGGGTCTTGGTGCTGGCAAAGCTGCAGATCTGACATACTGGGAGAGC
GCTGCTCGTGTGATTGCCGATGTGTCAAAGTCTGACAAAATTGTTGTTGA
GAAATCAACAGTTCCTGTAAAAACTGCTGAGGCAATTGAAAAAATTTTGA
CCCACAACAGCAAGGGAATCAAATTCCAGATCCTTTCAAACCCGGAGTTT
CTTGCTGAGGGAACTGCAATACAGGATCTTTTTAACCCAGATCGGGTCCT
TATCGGTGGTAGAGAAACGCCAGAAGGCCAGAAAGCCGTCAAAGCCTTGA
AGGATGTGTATGCACACTGGGTCCCAGAAGACCGAATTTTGACCACCAAC
CTCTGGTCTGCAGAGCTTTCGAAGCTTGCAGCCAATGCTTTCTTGGCACA
GAGGATCTCATCTGTTAATGCCATGTCAGCTCTCTGCGAGGCAACTGGAG
CTAATGTCAGTCAAGTGGCATTTGCTGTTGGTACAGACTCTAAGATTGGG
CCCAAATTCTTGATGCTANGGGTGGGGTCG
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