CX077897
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX077897 vs. ExPASy Swiss-Prot
Match: NU1C_EUCGG (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=ndhA PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.655e-45 Identity = 94/115 (81.74%), Postives = 96/115 (83.48%), Query Frame = -2 Query: 407 LPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIPYIFVPGLVEINKADXXXXXXXXXXXTLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLLPI 751 LPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG N+SIPYIFVP L EINK TLAKTY FLFI I TRWTLPRLR+DQLLNLGWKFLLPI Sbjct: 233 LPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNISIPYIFVPELFEINKVGRVFGTTIGIFITLAKTYFFLFISITTRWTLPRLRIDQLLNLGWKFLLPI 347
BLAST of CX077897 vs. ExPASy Swiss-Prot
Match: NDHI_VITVI (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Vitis vinifera GN=ndhI PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.468e-45 Identity = 85/89 (95.51%), Postives = 86/89 (96.63%), Query Frame = -3 Query: 1 MFPMVTGFMNYGQQTIRAARYIGQSFMITLSQANRLPVTIQYPYEKLIPSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKFETDI 267 MFPMVTGFMNYGQQT+RAARYIGQSFMITLS ANRLPVTIQYPYEKLI SERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWK ETDI Sbjct: 1 MFPMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDI 89
BLAST of CX077897 vs. ExPASy Swiss-Prot
Match: NDHI_NANDO (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Nandina domestica GN=ndhI PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.468e-45 Identity = 85/89 (95.51%), Postives = 86/89 (96.63%), Query Frame = -3 Query: 1 MFPMVTGFMNYGQQTIRAARYIGQSFMITLSQANRLPVTIQYPYEKLIPSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKFETDI 267 MFPMVTGFMNYGQQT+RAARYIGQSFMITLS ANRLPVTIQYPYEKLI SERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWK ETDI Sbjct: 1 MFPMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDI 89
BLAST of CX077897 vs. ExPASy Swiss-Prot
Match: NU1C_MORIN (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Morus indica GN=ndhA PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.529e-45 Identity = 93/115 (80.87%), Postives = 96/115 (83.48%), Query Frame = -2 Query: 407 LPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIPYIFVPGLVEINKADXXXXXXXXXXXTLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLLPI 751 LPEAEEEL+AGYQTEYSGIKFGLFYVASYLNLLVSSLFVT+LYLGG N+SIPYIFV EINK TLAKTYLFLFIPI TRWTLPRLRMDQLLNLGWKFLLPI Sbjct: 233 LPEAEEELIAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTILYLGGWNISIPYIFVFDFFEINKTYGVFEPTIGMFITLAKTYLFLFIPITTRWTLPRLRMDQLLNLGWKFLLPI 347
BLAST of CX077897 vs. ExPASy Swiss-Prot
Match: NU1C_CALFG (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Calycanthus floridus var. glaucus GN=ndhA PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.916e-45 Identity = 92/115 (80.00%), Postives = 96/115 (83.48%), Query Frame = -2 Query: 407 LPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIPYIFVPGLVEINKADXXXXXXXXXXXTLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLLPI 751 LPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG NL IPYIF+P INK D TLAK+YLFLF+PI TRWTLPR+RMDQLLNLGWKFLLPI Sbjct: 233 LPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLPIPYIFIPEPFGINKTDGVFGTTIDILITLAKSYLFLFVPIITRWTLPRMRMDQLLNLGWKFLLPI 347
BLAST of CX077897 vs. ExPASy Swiss-Prot
Match: NDHI_GOSHI (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Gossypium hirsutum GN=ndhI PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.726e-45 Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = -3 Query: 1 MFPMVTGFMNYGQQTIRAARYIGQSFMITLSQANRLPVTIQYPYEKLIPSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKFETDI 267 MFPMVTGFMNYG QT+RAARYIGQ FMITLS ANRLPVTIQYPYEKLI SERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKFETDI Sbjct: 1 MFPMVTGFMNYGHQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKFETDI 89
BLAST of CX077897 vs. ExPASy Swiss-Prot
Match: NDHI_GOSBA (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Gossypium barbadense GN=ndhI PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.726e-45 Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = -3 Query: 1 MFPMVTGFMNYGQQTIRAARYIGQSFMITLSQANRLPVTIQYPYEKLIPSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKFETDI 267 MFPMVTGFMNYG QT+RAARYIGQ FMITLS ANRLPVTIQYPYEKLI SERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKFETDI Sbjct: 1 MFPMVTGFMNYGHQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKFETDI 89
BLAST of CX077897 vs. ExPASy Swiss-Prot
Match: NU1C_LIRTU (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Liriodendron tulipifera GN=ndhA PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.009e-44 Identity = 93/115 (80.87%), Postives = 95/115 (82.61%), Query Frame = -2 Query: 407 LPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGSNLSIPYIFVPGLVEINKADXXXXXXXXXXXTLAKTYLFLFIPIATRWTLPRLRMDQLLNLGWKFLLPI 751 LPEAEEELVAGYQTEYSGIK GLFYVASYLNLLVSSLFVTVLYLGG NLSIPYIF+P L INK TLAK YLFLFIPI TRWTLPR+RMDQLLNLGWKFLLPI Sbjct: 233 LPEAEEELVAGYQTEYSGIKSGLFYVASYLNLLVSSLFVTVLYLGGWNLSIPYIFIPELFGINKTGGVFGTTIGIFITLAKAYLFLFIPITTRWTLPRMRMDQLLNLGWKFLLPI 347
BLAST of CX077897 vs. ExPASy Swiss-Prot
Match: NDHI_SPIOL (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Spinacia oleracea GN=ndhI PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.248e-44 Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = -3 Query: 1 MFPMVTGFMNYGQQTIRAARYIGQSFMITLSQANRLPVTIQYPYEKLIPSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKFETDI 267 MFPMVTGF+NYGQQTIRAARYIGQSFMITLS ANRLPVTIQYPYEKLI SERFRGRIHFEFDKCIACEVCVR CPIDLPVVDWK ETDI Sbjct: 1 MFPMVTGFINYGQQTIRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRACPIDLPVVDWKLETDI 89
BLAST of CX077897 vs. ExPASy Swiss-Prot
Match: NDHI_ACOCL (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Acorus calamus GN=ndhI PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.248e-44 Identity = 82/89 (92.13%), Postives = 86/89 (96.63%), Query Frame = -3 Query: 1 MFPMVTGFMNYGQQTIRAARYIGQSFMITLSQANRLPVTIQYPYEKLIPSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKFETDI 267 MFPMVTGFMNYGQQT+RAARYIGQSFMITLS ANRLPVTIQYPYEKLI SERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDW+ +TD+ Sbjct: 1 MFPMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWRLDTDV 89 The following BLAST results are available for this feature:
BLAST of CX077897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX077897 ID=CX077897; Name=CX077897; organism=Citrus sinensis; type=EST; length=752bpback to top |