EY680022

Overview
NameEY680022
Unique NameEY680022
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680022 vs. ExPASy Swiss-Prot
Match: Y182_METEA (Uncharacterized oxidoreductase MexAM1_META1p0182 OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=MexAM1_META1p0182 PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.397e-14
Identity = 48/129 (37.21%), Postives = 70/129 (54.26%), Query Frame = -3
Query:   48 VLSATQEAARHMGEGGRIINIGSTNADRMPFAGGGPYAMSKSALVGLTKGLARDLGPRGITINNVQPGPVDTDMNPASG----DFAESLIGFMAVGRYGHVEEIASFVAYLVGPEAGYITGASLTIDGG 422
            VL ATQ A++H+GEGG IINI S   D +       Y+ +K AL  ++  LA +L PR I +N V PG V T+    +G    +    L+    +GR G  ++IA  VA+L   +A ++TG  +   GG
Sbjct:  119 VLLATQAASKHLGEGGSIINISSVVTDVL-MPTSAVYSGTKGALNAISGVLANELAPRKIRVNVVSPGYVVTEGTHTAGIAGSEMEAGLVAQTPLGRSGQPDDIAGVVAFLASDDARWVTGEVINASGG 246          
BLAST of EY680022 vs. ExPASy Swiss-Prot
Match: DHB8_MOUSE (Estradiol 17-beta-dehydrogenase 8 OS=Mus musculus GN=Hsd17b8 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 6.890e-14
Identity = 46/126 (36.51%), Postives = 68/126 (53.97%), Query Frame = -3
Query:   48 VLSATQEAARHMGEGGRIINIGSTNADRMPFAGGGPYAMSKSALVGLTKGLARDLGPRGITINNVQPGPVDTDMNPASGD-FAESLIGFMAVGRYGHVEEIASFVAYLVGPEAGYITGASLTIDGG 422
            V  A  +A    G  G IINI S    ++   G   YA SK+ ++GLT+  AR+LG  GI  N+V PG + T M     +   + +   + +G  G  E++A  VA+L   ++GYITGAS+ + GG
Sbjct:  133 VTQAAAQALVSSGGRGSIINISSI-IGKVGNIGQTNYASSKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKMPEKVKDKVTAMIPLGHMGDPEDVADVVAFLASEDSGYITGASVEVSGG 257          

HSP 2 Score: 23.0978 bits (48), Expect = 6.890e-14
Identity = 8/17 (47.06%), Postives = 13/17 (76.47%), Query Frame = -1
Query:  419 SLEDFDRTLAINVRSVF 469
            S ED+DR +A+N++  F
Sbjct:  115 SEEDWDRVIAVNLKGTF 131          
BLAST of EY680022 vs. ExPASy Swiss-Prot
Match: FABG3_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplastic OS=Brassica napus GN=bkr3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.205e-14
Identity = 50/129 (38.76%), Postives = 72/129 (55.81%), Query Frame = -3
Query:   48 VLSATQEAARHMGEG--GRIINIGSTNADRMPFAGGGPYAMSKSALVGLTKGLARDLGPRGITINNVQPGPVDTDMNPASG-DFAESLIGFMAVGRYGHVEEIASFVAYL-VGPEAGYITGASLTIDGG 422
            V   TQ A + M +   GRIINI S     +   G   YA +K+ ++G +K  AR+   R I +N V PG + +DM    G D  + ++G + +GRYG  E++A  V +L + P A YITG + TIDGG
Sbjct:  185 VFLCTQAATKIMMKKRKGRIINIASV-VGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGG 312          
BLAST of EY680022 vs. ExPASy Swiss-Prot
Match: FABG2_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplastic OS=Brassica napus GN=bkr2 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.205e-14
Identity = 50/129 (38.76%), Postives = 72/129 (55.81%), Query Frame = -3
Query:   48 VLSATQEAARHMGEG--GRIINIGSTNADRMPFAGGGPYAMSKSALVGLTKGLARDLGPRGITINNVQPGPVDTDMNPASG-DFAESLIGFMAVGRYGHVEEIASFVAYL-VGPEAGYITGASLTIDGG 422
            V   TQ A + M +   GRIINI S     +   G   YA +K+ ++G +K  AR+   R I +N V PG + +DM    G D  + ++G + +GRYG  E++A  V +L + P A YITG + TIDGG
Sbjct:  198 VFLCTQAATKIMMKKRKGRIINIASV-VGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGG 325          
BLAST of EY680022 vs. ExPASy Swiss-Prot
Match: FABG1_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic OS=Brassica napus GN=gbkr1 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.205e-14
Identity = 50/129 (38.76%), Postives = 72/129 (55.81%), Query Frame = -3
Query:   48 VLSATQEAARHMGEG--GRIINIGSTNADRMPFAGGGPYAMSKSALVGLTKGLARDLGPRGITINNVQPGPVDTDMNPASG-DFAESLIGFMAVGRYGHVEEIASFVAYL-VGPEAGYITGASLTIDGG 422
            V   TQ A + M +   GRIINI S     +   G   YA +K+ ++G +K  AR+   R I +N V PG + +DM    G D  + ++G + +GRYG  E++A  V +L + P A YITG + TIDGG
Sbjct:  190 VFLCTQAATKIMMKKRKGRIINIASV-VGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGG 317          
BLAST of EY680022 vs. ExPASy Swiss-Prot
Match: DHKR_STRCM (Monensin polyketide synthase putative ketoacyl reductase OS=Streptomyces cinnamonensis PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.205e-14
Identity = 50/126 (39.68%), Postives = 64/126 (50.79%), Query Frame = -3
Query:   42 EGGRIINIGSTNADRMPFAGGGPYAMSKSALVGLTKGLARDLGPRGITINNVQPGPVDTDM-------NPASGDFAESLI-----GFMAVGRYGHVEEIASFVAYLVGPEAGYITGASLTIDGGFG 383
            E GRIIN+ ST A +     G PY+ SK  +VG TK L  +L P GIT+N V PG V+T M         A+ D  E  I       + +GRY   EE+A  + YL    A  IT  +L + GG G
Sbjct:  135 ERGRIINVAST-AGKQGVVLGAPYSASKHGVVGFTKALGNELAPTGITVNAVCPGYVETPMAQRVRQGYAAAYDTTEEAILTKFQAKIPLGRYSTPEEVAGLIGYLASDTAASITSQALNVCGGLG 259          
BLAST of EY680022 vs. ExPASy Swiss-Prot
Match: CPNA_COMTE (Cyclopentanol dehydrogenase OS=Comamonas testosteroni GN=cpnA PE=3 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.164e-13
Identity = 40/116 (34.48%), Postives = 58/116 (50.00%), Query Frame = -3
Query:   39 GRIINIGSTNADRMPFAGGGPYAMSKSALVGLTKGLARDLGPRGITINNVQPGPVDTDMNPASGDFAES---LIGFMAVGRYGHVEEIASFVAYLVGPEAGYITGASLTIDGGFGA 377
            G I+N+ S     +   G   Y  SK A+   TK  A DL P  I +N+V PG + T M     D  +S   L+G   +GR     E++  V +LV  EA ++ G+ L +DGG+ A
Sbjct:  135 GCIVNVSSIYG-LVGAPGAAAYEASKGAVRLFTKACAVDLAPFNIRVNSVHPGVIATPMTQQILDAPQSARALLGPTLLGRAAQPMEVSQAVLFLVSDEASFVHGSELVVDGGYTA 249          

HSP 2 Score: 35.4242 bits (80), Expect = 1.164e-13
Identity = 18/33 (54.55%), Postives = 23/33 (69.70%), Query Frame = -1
Query:  419 LCRYAGGVTVGPVEDFSLEDFDRTLAINVRSVF 517
            L   AG +T+ PV+D S E++DR   INVRSVF
Sbjct:   87 LVNNAGILTLKPVQDTSNEEWDRIFEINVRSVF 119          
BLAST of EY680022 vs. ExPASy Swiss-Prot
Match: CPNA_COMS9 (Cyclopentanol dehydrogenase OS=Comamonas sp. (strain NCIMB 9872) GN=cpnA PE=1 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.164e-13
Identity = 40/116 (34.48%), Postives = 58/116 (50.00%), Query Frame = -3
Query:   39 GRIINIGSTNADRMPFAGGGPYAMSKSALVGLTKGLARDLGPRGITINNVQPGPVDTDMNPASGDFAES---LIGFMAVGRYGHVEEIASFVAYLVGPEAGYITGASLTIDGGFGA 377
            G I+N+ S     +   G   Y  SK A+   TK  A DL P  I +N+V PG + T M     D  +S   L+G   +GR     E++  V +LV  EA ++ G+ L +DGG+ A
Sbjct:  135 GCIVNVSSIYG-LVGAPGAAAYEASKGAVRLFTKACAVDLAPFNIRVNSVHPGVIATPMTQQILDAPQSARALLGPTLLGRAAQPMEVSQAVLFLVSDEASFVHGSELVVDGGYTA 249          

HSP 2 Score: 35.4242 bits (80), Expect = 1.164e-13
Identity = 18/33 (54.55%), Postives = 23/33 (69.70%), Query Frame = -1
Query:  419 LCRYAGGVTVGPVEDFSLEDFDRTLAINVRSVF 517
            L   AG +T+ PV+D S E++DR   INVRSVF
Sbjct:   87 LVNNAGILTLKPVQDTSNEEWDRIFEINVRSVF 119          
BLAST of EY680022 vs. ExPASy Swiss-Prot
Match: FIXR_BRAJA (Protein fixR OS=Bradyrhizobium japonicum GN=fixR PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.202e-13
Identity = 44/111 (39.64%), Postives = 63/111 (56.76%), Query Frame = -3
Query:   48 GRIINIGSTNADRM-PFAGGGPYAMSKSALVGLTKGLARDLGPRGITINNVQPGPVDTDMNPASGDFAESLIGFMAVGRYGHVEEIASFVAYLVGPEAGYITGASLTIDGG 377
            G I+N+ S    R+ PFAG   YA SK+AL  LT+ LA D  P GI +N + PG + TDM   S D    ++  + + R G  +E+A  + +L    A Y+TGA + I+GG
Sbjct:  168 GSIVNVTSIAGSRVHPFAGSA-YATSKAALASLTRELAHDYAPHGIRVNAIAPGEIRTDM--LSPDAEARVVASIPLRRVGTPDEVAKVIFFLCSDAASYVTGAEVPINGG 275          
BLAST of EY680022 vs. ExPASy Swiss-Prot
Match: FABG_ARATH (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g24360 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.570e-13
Identity = 50/129 (38.76%), Postives = 70/129 (54.26%), Query Frame = -3
Query:   48 VLSATQEAARHM--GEGGRIINIGSTNADRMPFAGGGPYAMSKSALVGLTKGLARDLGPRGITINNVQPGPVDTDMNPASG-DFAESLIGFMAVGRYGHVEEIASFVAYL-VGPEAGYITGASLTIDGG 422
            V   TQ A + M   + GRIINI S     +   G   YA +K  ++  +K  AR+   R I +N V PG + +DM    G D  + ++G + +GRYG  EE+A  V +L + P A YITG + TIDGG
Sbjct:  189 VFLCTQAAVKIMMKKKRGRIINISSV-VGLIGNIGQANYAAAKGGVISFSKTAAREGASRNINVNVVCPGFIASDMTAELGEDMEKKILGTIPLGRYGKAEEVAGLVEFLALSPAASYITGQAFTIDGG 316          
The following BLAST results are available for this feature:
BLAST of EY680022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
Y182_METEA5.397e-1437.21Uncharacterized oxidoreductase MexAM1_META1p0182 O... [more]
DHB8_MOUSE6.890e-1436.51Estradiol 17-beta-dehydrogenase 8 OS=Mus musculus ... [more]
FABG3_BRANA9.205e-1438.763-oxoacyl-[acyl-carrier-protein] reductase 3, chlo... [more]
FABG2_BRANA9.205e-1438.763-oxoacyl-[acyl-carrier-protein] reductase 2, chlo... [more]
FABG1_BRANA9.205e-1438.763-oxoacyl-[acyl-carrier-protein] reductase 1, chlo... [more]
DHKR_STRCM9.205e-1439.68Monensin polyketide synthase putative ketoacyl red... [more]
CPNA_COMTE1.164e-1334.48Cyclopentanol dehydrogenase OS=Comamonas testoster... [more]
CPNA_COMS91.164e-1334.48Cyclopentanol dehydrogenase OS=Comamonas sp. (stra... [more]
FIXR_BRAJA1.202e-1339.64Protein fixR OS=Bradyrhizobium japonicum GN=fixR P... [more]
FABG_ARATH1.570e-1338.763-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-006-F01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680022 ID=EY680022; Name=EY680022; organism=Citrus sinensis; type=EST; length=889bp
AAGGTCGGAGCGTGGTGCGATGTCGCAGCTTGTGTTCAGGCGCCGAAACC
GCCGTCGATGGTCAGACTGGCGCCGGTGATATAGCCGGCCTCAGGGCCTA
CCAGGTAGGCGACGAAACTGGCGATCTCTTCCACATGGCCATACCGGCCC
ACGGCCATGAAGCCGATCAGGCTCTCGGCGAAATCACCACTTGCCGGGTT
CATGTCGGTGTCCACCGGGCCTGGCTGCACGTTATTGATGGTGATGCCAC
GTGGCCCCAGGTCGCGGGCCAGGCCTTTGGTCAGGCCGACCAGCGCCGAC
TTGCTCATGGCGTACGGGCCGCCACCGGCAAACGGCATGCGATCGGCATT
GGTGCTGCCGATGTTGATGATGCGGCCACCTTCACCCATGTGCCGCGCGG
CTTCCTGGGTGGCGGACAAAACACGCTGCGCACGTTGATGGCGAGGGTAC
GGTCGAAGTCCTCCAGGCTGAAATCTTCCACCGGGCCGACGGTCACACCG
CCAGCGTAGCGACACAGGATCATCCAGACACCAGAAACGCACTCATACGA
GGCATGAAACACATGGAGGAGAGGGGGCAAATCGTGAGCGTGCAGTAGTG
GGTAAGTGTGGACGAGACGGCGGCTACTTTCAGACGGGGCAGAAGCGAGG
AGGGGCGAGCGCGGGGACGTCGGGAGAAAAAGAACCGAACACGCGGCCTA
CTACGCTAAACACCCGTCTACGACAGCATTTAGACAGTAACAGAGCCAAA
AGCGGGAGGAAACCAAGAATAAAAAAACCGACAAATCCAGTAAAAAATCA
AGCATATAAAATAAACAACACAAAATACGATAGATCAATAAAAACACAAA
AAGACCACCCCAGAGAAAGAAGCCTGAGCATCTGAAACA
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