EY702299

Overview
NameEY702299
Unique NameEY702299
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702299 vs. ExPASy Swiss-Prot
Match: CY24B_PIG (Cytochrome b-245 heavy chain (Fragment) OS=Sus scrofa GN=CYBB PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.698e-25
Identity = 62/152 (40.79%), Postives = 87/152 (57.24%), Query Frame = 3
Query:   21 SIKAVSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIRTLGDWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPDF------PRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDI 458
            S + V I KV  +P   + L M K   FR + GQY+FV   AVS  EWHPF++TSAP++D+ S+HIR +GDWT                   GL +A G +  +F      P++ +DGP+G  ++D   Y+VV+LVG GIG TP  SI+K +
Sbjct:  205 SQQKVVITKVVTHPFKTIELQMKKKG-FRMEVGQYIFVKRPAVSKLEWHPFTLTSAPEEDFFSIHIRIVGDWT------------------EGLFKACGCDKQEFQDAWKLPKIAVDGPFGTASEDVFSYQVVMLVGAGIGVTPFASILKSV 337          
BLAST of EY702299 vs. ExPASy Swiss-Prot
Match: DUOX1_HUMAN (Dual oxidase 1 OS=Homo sapiens GN=DUOX1 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.453e-25
Identity = 56/143 (39.16%), Postives = 84/143 (58.74%), Query Frame = 3
Query:   33 VSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIRTLGDWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIV 461
            +S+ K  + P  V  L   +P  F YKSGQ++ + C A+   E+HPF++TSAP +D LS+HIR  G WT +LR ++S                 G     +P++ +DGP+G   Q++ ++EV +LVG GIG TP  SI+KD+V
Sbjct: 1275 ISVVKAELLPSGVTHLRFQRPQGFEYKSGQWVRIACLALGTTEYHPFTLTSAPHEDTLSLHIRAAGPWTTRLREIYS--------------APTGDRCARYPKLYLDGPFGEGHQEWHKFEVSVLVGGGIGVTPFASILKDLV 1403          
BLAST of EY702299 vs. ExPASy Swiss-Prot
Match: DUOX2_PIG (Dual oxidase 2 OS=Sus scrofa GN=DUOX2 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 8.428e-25
Identity = 58/143 (40.56%), Postives = 87/143 (60.84%), Query Frame = 3
Query:   33 VSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIRTLGDWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIV 461
            +S+ K  + P  V  L   +P  F YKSGQ++ + C  +   E+HPF++TSAP +D LS+HIR +G WT +LR ++S      P G  G  R        +P++ +DGP+G   Q++ ++EV +LVG GIG TP  SI+KD+V
Sbjct: 1269 ISVVKAELLPSGVTHLQFQRPQGFEYKSGQWVRIACLGLGTNEYHPFTLTSAPHEDTLSLHIRAVGPWTTRLREIYSH-----PMG-DGYAR--------YPKLYLDGPFGEGHQEWHKFEVSVLVGGGIGVTPFASILKDLV 1397          
BLAST of EY702299 vs. ExPASy Swiss-Prot
Match: NOX3_HUMAN (NADPH oxidase 3 OS=Homo sapiens GN=NOX3 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.319e-24
Identity = 60/142 (42.25%), Postives = 76/142 (53.52%), Query Frame = 3
Query:   33 VSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIRTLGDWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDI 458
            V I KV  +P  VL LHM K   F+   GQY+ V C A+S  EWHPF++TSAP +D+ SVHIR  GDWT  L   F         G  G    E  +    PR+ +DGP+G    D   Y V + V  GIG TP  +++K I
Sbjct:  293 VVITKVVSHPSGVLELHMKKRG-FKMAPGQYILVQCPAISSLEWHPFTLTSAPQEDFFSVHIRAAGDWTAALLEAF---------GAEGQALQEPWS---LPRLAVDGPFGTALTDVFHYPVCVCVAAGIGVTPFAALLKSI 421          
BLAST of EY702299 vs. ExPASy Swiss-Prot
Match: DUOX_DROME (Dual oxidase OS=Drosophila melanogaster GN=Duox PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.998e-22
Identity = 54/150 (36.00%), Postives = 86/150 (57.33%), Query Frame = 3
Query:   12 LRSSIKAVSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIRTLGDWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIV 461
            LR+   A+ +    + P +V+ +   +P   +Y SGQ++ ++C A  P E H F++TSAP +++LS HI+  G WT +LR  F      P N          +N  D P++ I+GP+G   QD+ ++EV ++VG GIG TP  SI+ D+V
Sbjct: 1189 LRTKYMALDVIDTDLLPSDVIKIKFYRPPNLKYLSGQWVRLSCTAFRPHEMHSFTLTSAPHENFLSCHIKAQGPWTWKLRNYFD-----PCN----------YNPEDQPKIRIEGPFGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLV 1323          
BLAST of EY702299 vs. ExPASy Swiss-Prot
Match: NOX4_RAT (NADPH oxidase 4 OS=Rattus norvegicus GN=Nox4 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.819e-19
Identity = 57/158 (36.08%), Postives = 93/158 (58.86%), Query Frame = 3
Query:    6 RPLRSSIKAVSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLS--VHIRTLGDWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNMK 473
            R +RS+ K V+I  V  +P +V+ L M K + F+ + GQY+ ++C +VS  E HPF++T  P +   +  VH + +GDWT + R    ++  PP +  S +L      N  +P++ IDGP+G+P ++   YEV L V  GIG TP  SI+  ++++ K
Sbjct:  301 RCIRSN-KPVTIISVINHPSDVMELRMIK-ENFKARPGQYIILHCPSVSALENHPFTLTMCPTETKATFGVHFKVVGDWTERFR----DLLLPPSSQDSEILPFIQSRN--YPKLYIDGPFGSPFEESLNYEVSLCVAGGIGVTPFASILNTLLDDWK 450          
BLAST of EY702299 vs. ExPASy Swiss-Prot
Match: NOX4_MOUSE (NADPH oxidase 4 OS=Mus musculus GN=Nox4 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.819e-19
Identity = 57/158 (36.08%), Postives = 93/158 (58.86%), Query Frame = 3
Query:    6 RPLRSSIKAVSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLS--VHIRTLGDWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNMK 473
            R +RS+ K V+I  V  +P +V+ L M K + F+ + GQY+ ++C +VS  E HPF++T  P +   +  VH + +GDWT + R    ++  PP +  S +L      N  +P++ IDGP+G+P ++   YEV L V  GIG TP  SI+  ++++ K
Sbjct:  301 RCIRSN-KPVTIISVINHPSDVMELRMIK-ENFKARPGQYIILHCPSVSALENHPFTLTMCPTETKATFGVHFKVVGDWTERFR----DLLLPPSSQDSEILPFIHSRN--YPKLYIDGPFGSPFEESLNYEVSLCVAGGIGVTPFASILNTLLDDWK 450          
BLAST of EY702299 vs. ExPASy Swiss-Prot
Match: NOX4_PONAB (NADPH oxidase 4 OS=Pongo abelii GN=NOX4 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.102e-19
Identity = 56/158 (35.44%), Postives = 94/158 (59.49%), Query Frame = 3
Query:    6 RPLRSSIKAVSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLS--VHIRTLGDWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNMK 473
            R +RS+ K V+I  V  +P +V+ + M K + F+ + GQY+ ++C +VS  E HPF++T  P +   +  VH++ +GDWT + R    ++  PP +  S +L      N  +P++ IDGP+G+P ++   YEV L V  GIG TP  SI+  ++++ K
Sbjct:  301 RYIRSN-KPVTIISVISHPSDVMEIRMVK-ENFKARPGQYITLHCPSVSALENHPFTLTMCPTETKATFGVHLKIVGDWTERFR----DLLLPPSSQDSEILPFIQSRN--YPKLYIDGPFGSPFEESLNYEVSLCVAGGIGVTPFASILNTLLDDWK 450          
BLAST of EY702299 vs. ExPASy Swiss-Prot
Match: NOX4_HUMAN (NADPH oxidase 4 OS=Homo sapiens GN=NOX4 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.102e-19
Identity = 56/158 (35.44%), Postives = 94/158 (59.49%), Query Frame = 3
Query:    6 RPLRSSIKAVSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLS--VHIRTLGDWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNMK 473
            R +RS+ K V+I  V  +P +V+ + M K + F+ + GQY+ ++C +VS  E HPF++T  P +   +  VH++ +GDWT + R    ++  PP +  S +L      N  +P++ IDGP+G+P ++   YEV L V  GIG TP  SI+  ++++ K
Sbjct:  301 RYIRSN-KPVTIISVMSHPSDVMEIRMVK-ENFKARPGQYITLHCPSVSALENHPFTLTMCPTETKATFGVHLKIVGDWTERFR----DLLLPPSSQDSEILPFIQSRN--YPKLYIDGPFGSPFEESLNYEVSLCVAGGIGVTPFASILNTLLDDWK 450          
BLAST of EY702299 vs. ExPASy Swiss-Prot
Match: NOXC_DICDI (Superoxide-generating NADPH oxidase heavy chain subunit C OS=Dictyostelium discoideum GN=noxC PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.179e-18
Identity = 54/154 (35.06%), Postives = 88/154 (57.14%), Query Frame = 3
Query:   69 VLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIRTLGDWTRQL-------------RTVFSEVCRPP--PNGISGLLRAEGHNNPDFP---------RVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDI 458
            V+ L  SKP  F YK GQY+ +N   +S  +WHPF++TS+P +D + VHIR  G+WT++L             + +++ + +    P+G + ++    +NN D           R+ IDGP+G+ +Q   + + V+LVG GIG +PM S++KDI
Sbjct:  817 VINLTFSKPPSFDYKPGQYLLINVPHISKLQWHPFTMTSSPLEDKIYVHIRVTGNWTKKLFRWLSIKKQLQQQQQLYNNIKQQNVLPDGSNFIIN--NNNNIDQIDLEIGLKPFRINIDGPFGSSSQYALKQKQVILVGAGIGVSPMASLLKDI 968          
The following BLAST results are available for this feature:
BLAST of EY702299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
CY24B_PIG1.698e-2540.79Cytochrome b-245 heavy chain (Fragment) OS=Sus scr... [more]
DUOX1_HUMAN6.453e-2539.16Dual oxidase 1 OS=Homo sapiens GN=DUOX1 PE=1 SV=1[more]
DUOX2_PIG8.428e-2540.56Dual oxidase 2 OS=Sus scrofa GN=DUOX2 PE=1 SV=2[more]
NOX3_HUMAN9.319e-2442.25NADPH oxidase 3 OS=Homo sapiens GN=NOX3 PE=1 SV=1[more]
DUOX_DROME2.998e-2236.00Dual oxidase OS=Drosophila melanogaster GN=Duox PE... [more]
NOX4_RAT1.819e-1936.08NADPH oxidase 4 OS=Rattus norvegicus GN=Nox4 PE=1 ... [more]
NOX4_MOUSE1.819e-1936.08NADPH oxidase 4 OS=Mus musculus GN=Nox4 PE=1 SV=1[more]
NOX4_PONAB3.102e-1935.44NADPH oxidase 4 OS=Pongo abelii GN=NOX4 PE=2 SV=2[more]
NOX4_HUMAN3.102e-1935.44NADPH oxidase 4 OS=Homo sapiens GN=NOX4 PE=1 SV=2[more]
NOXC_DICDI1.179e-1835.06Superoxide-generating NADPH oxidase heavy chain su... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-005-D08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702299 ID=EY702299; Name=EY702299; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGCTGAGGTCAAGCATTAAGGCAGTTTCCATACAAAAGGTG
GCTGTTTATCCTGGAAATGTGCTGGCTCTTCACATGTCAAAGCCAGATAG
ATTCAGATACAAGAGCGGGCAGTACATGTTTGTCAATTGTGCTGCTGTGT
CTCCATTCGAATGGCACCCATTTTCAATAACTTCTGCCCCGGATGATGAC
TACCTCAGTGTTCACATTAGAACTCTTGGTGACTGGACTCGTCAACTCAG
AACAGTTTTCTCAGAGGTATGCCGACCACCTCCAAACGGAATAAGTGGAC
TCCTCCGAGCCGAGGGACATAACAATCCTGATTTTCCTAGAGTTTTGATT
GACGGTCCATATGGAGCTCCAGCACAAGACTACAAAGAGTATGAGGTGGT
TTTATTAGTTGGTCTGGGAATTGGAGCAACTCCGATGATCAGCATTGTTA
AAGACATAGTGAACAACATGAAAGCCATAGAGGAAGAAGAAGAAAATGAT
TTAGAAAACGGTCGTGACACCGGCTTTAACACAACAACATCATCATCATC
GACAACAACTACGAGCCCTTCTTCTTCTGGACACAGAAGAAGGGACCAAT
TCAGGACAAGAAGAGCATACTCCTATTGCGTTACAAGAGACCAAGGCTCG
TTCCATTGGGTTTAAGGGAGGGATGAATGAGGGGGCTGAATTGAACACAA
CAATGGCTAGAAGTTCACAAATACGGGCCAGGGGATATGAAAAAGGGGAG
GTCCCTCAGATCTCATTGCATGCTTGAGCCCCCAATCCGCCAAAAGGCGC
TGAAGCTGGGCTGGAACACCGTTAAGGCCATTTCCAGAAGCTAATGGGAC
CAGTGGACCAAC
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