EY702299

Overview
NameEY702299
Unique NameEY702299
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702299 vs. ExPASy Swiss-Prot
Match: DUOX1_CAEEL (Dual oxidase 1 OS=Caenorhabditis elegans GN=bli-3 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.850e-18
Identity = 50/147 (34.01%), Postives = 83/147 (56.46%), Query Frame = 3
Query:   27 KAVSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPF--EWHPFSITSAPDDDYLSVHIRTLGDWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIV 461
            K + I    + P +++ +   +P  F+YKSGQ++ V+  ++S    E H FSI S+P D+ + ++I+ +G WT +LR              S L+R+    +P FP + + GPYG   Q++ +YEV ++VG GIG TP  S + D+V
Sbjct: 1214 KKLEIVNAEILPSDIIYIEYRRPREFKYKSGQWVTVSSPSISCTFNESHAFSIASSPQDENMKLYIKAVGPWTWKLR--------------SELIRSLNTGSP-FPLIHMKGPYGDGNQEWMDYEVAIMVGAGIGVTPYASTLVDLV 1345          
BLAST of EY702299 vs. ExPASy Swiss-Prot
Match: NOX5_HUMAN (NADPH oxidase 5 OS=Homo sapiens GN=NOX5 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.641e-18
Identity = 56/166 (33.73%), Postives = 85/166 (51.20%), Query Frame = 3
Query:   18 SSIKAVSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDD-DYLSVHIRTLGDWTRQLRTVFSEVCRPPPNGISGLLRA-----------------EGHNNPDFPRVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIV 461
            S + AV I +V + P  V  L + +P  F Y+ G Y+++N   ++ +EWHPF+I+SAP+  D + +HIR+ G WT +L   F +   P   G   L R+                 E H   +  +  IDGPYG P +     E  +L+G GIG TP  SI++ I+
Sbjct:  441 SRMAAVCIMEVNLLPSKVTHLLIKRPPFFHYRPGDYLYLNIPTIARYEWHPFTISSAPEQKDTIWLHIRSQGQWTNRLYESF-KASDPLGRGSKRLSRSVTMRKSQRSSKGSEILLEKHKFCNI-KCYIDGPYGTPTRRIFASEHAVLIGAGIGITPFASILQSIM 604          
The following BLAST results are available for this feature:
BLAST of EY702299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
DUOX1_CAEEL5.850e-1834.01Dual oxidase 1 OS=Caenorhabditis elegans GN=bli-3 ... [more]
NOX5_HUMAN7.641e-1833.73NADPH oxidase 5 OS=Homo sapiens GN=NOX5 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-005-D08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702299 ID=EY702299; Name=EY702299; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGCTGAGGTCAAGCATTAAGGCAGTTTCCATACAAAAGGTG
GCTGTTTATCCTGGAAATGTGCTGGCTCTTCACATGTCAAAGCCAGATAG
ATTCAGATACAAGAGCGGGCAGTACATGTTTGTCAATTGTGCTGCTGTGT
CTCCATTCGAATGGCACCCATTTTCAATAACTTCTGCCCCGGATGATGAC
TACCTCAGTGTTCACATTAGAACTCTTGGTGACTGGACTCGTCAACTCAG
AACAGTTTTCTCAGAGGTATGCCGACCACCTCCAAACGGAATAAGTGGAC
TCCTCCGAGCCGAGGGACATAACAATCCTGATTTTCCTAGAGTTTTGATT
GACGGTCCATATGGAGCTCCAGCACAAGACTACAAAGAGTATGAGGTGGT
TTTATTAGTTGGTCTGGGAATTGGAGCAACTCCGATGATCAGCATTGTTA
AAGACATAGTGAACAACATGAAAGCCATAGAGGAAGAAGAAGAAAATGAT
TTAGAAAACGGTCGTGACACCGGCTTTAACACAACAACATCATCATCATC
GACAACAACTACGAGCCCTTCTTCTTCTGGACACAGAAGAAGGGACCAAT
TCAGGACAAGAAGAGCATACTCCTATTGCGTTACAAGAGACCAAGGCTCG
TTCCATTGGGTTTAAGGGAGGGATGAATGAGGGGGCTGAATTGAACACAA
CAATGGCTAGAAGTTCACAAATACGGGCCAGGGGATATGAAAAAGGGGAG
GTCCCTCAGATCTCATTGCATGCTTGAGCCCCCAATCCGCCAAAAGGCGC
TGAAGCTGGGCTGGAACACCGTTAAGGCCATTTCCAGAAGCTAATGGGAC
CAGTGGACCAAC
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