CX077777
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX077777 vs. ExPASy Swiss-Prot
Match: RF1_METMP (Peptide chain release factor subunit 1 OS=Methanococcus maripaludis GN=prf1 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.138e-26 Identity = 64/192 (33.33%), Postives = 108/192 (56.25%), Query Frame = 1 Query: 7 FGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEE-ISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLK 579 +G I++D N GT+ G T +L K T +P K GGQSA R RL + H ++ + E AT+ F+ P + + GL+L G + K E ++ D L+ KI++ D+ Y E G + ++ ++++L ++ ++EK LI ++F+E I D G +G +K LE+GA++ LIV E++ I R +K Sbjct: 142 YGVILVDRNEATIGTVRGKTITILKKLTSGVPGKFKAGGQSARRLERLIDDAAHQFMVRIGEYATESFM-PILEEKKLKGLLLGGPGNTKNEFAEKDYLHHELKKKIIDTFDLCYTEEFGIRELLDKASDLLRDIDLMKEKNLIQRFFKELIKDDGGLSAYGEAQVMKYLEMGAIDTLIVTEDIGITRVTVK 332
BLAST of CX077777 vs. ExPASy Swiss-Prot
Match: RF1_METM7 (Peptide chain release factor subunit 1 OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=prf1 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.204e-25 Identity = 65/192 (33.85%), Postives = 107/192 (55.73%), Query Frame = 1 Query: 7 FGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEE-ISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLK 579 +G I++D N GT+ G T VL K T +P K GGQSA R RL + H ++ + E AT+ F+ P + + GL+L G + K E ++ D L+ KI++ D+ Y E G + +E ++++L ++ ++EK LI ++F+E I D G +G +K L +GA++ LIV E++ I R +K Sbjct: 142 YGVILVDRNEATIGTVKGKTITVLKKLTSGVPGKFKAGGQSARRLERLIDDAAHQFMVRIGEYATESFM-PILEEKKLKGLLLGGPGNTKNEFAEKDYLHHELKKKIIDTFDLCYTEEFGIRELLEKASDLLRDLDLMKEKNLIQRFFKELIKDDGGLSAYGEAQVMKYLGMGAIDTLIVTEDIGITRVTVK 332
BLAST of CX077777 vs. ExPASy Swiss-Prot
Match: RF1_METBU (Peptide chain release factor subunit 1 OS=Methanococcoides burtonii (strain DSM 6242) GN=prf1 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25 Identity = 58/191 (30.37%), Postives = 110/191 (57.59%), Query Frame = 1 Query: 7 FGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLK 579 +G +V+D G L+G E T +P K +GGQSA RF +LR+ H++ ++ + A++ F+ A Q + G+++ G + K E + F ++ K+L++ DV+Y E+G ++ + ++E L ++ + EK+L+ ++F E+ D+GK +G D+ + L +GAV+IL++ E+L R +K Sbjct: 140 YGLLVLDRREATVGLLTGKQIEAFRNLTSTVPGKQRKGGQSAHRFQQLRLIAIHDFYKRIGDAASEVFL--AVEQKDFEGVLIGGPSPTKEEFEAGNFFHHEIEKKVLDLFDVAYTDESGLSELVNAASERLEDLDLMVEKKLMQQFFRELVSDSGKATYGEDNVRENLIIGAVDILLISEDLRAVRETVK 328
BLAST of CX077777 vs. ExPASy Swiss-Prot
Match: RF1_METKA (Peptide chain release factor subunit 1 OS=Methanopyrus kandleri GN=prf1 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.606e-24 Identity = 73/231 (31.60%), Postives = 114/231 (49.35%), Query Frame = 1 Query: 1 DKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEE-ISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATG-EIVIKHLNRDQEANQSNFRDAATSAELEVQE 687 D +G +VMD G + G E + + T D+P KH GGQS RF RL H + +K E A + F ++ G+I+ G K E D L+ K+L VVDV E+G +A+ + E L + ++EKRL+ K+ EE ++ + Y VD+ LK +GAVE+L+V E+L+ + +L+ G E ++ +D+ AEL V+E Sbjct: 138 DVYGILVMDRREATIGLVKGKRIEPVKRLTSDVPGKHKAGGQSQRRFDRLIEHAAHEFYQKVGEAAREAF----EDVKDLKGIIVGGPGPTKEEFLDGDYLPKDLKEKVLTVVDVGNTDESGLREALNKAEEALKEAELVREKRLVRKFMEEAVNGELAAYGEEVDELLK---MGAVEVLLVSEDLEGYKVILRCPECGYENIVTVKEKDEAKKYVEECPECGEAELNVEE 361
BLAST of CX077777 vs. ExPASy Swiss-Prot
Match: RF1_ARCFU (Peptide chain release factor subunit 1 OS=Archaeoglobus fulgidus GN=prf1 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.510e-23 Identity = 60/187 (32.09%), Postives = 105/187 (56.15%), Query Frame = 1 Query: 7 FGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINR 567 +G IV+D G L G EVL T +P KH +GGQS++RF RLR H + +K E+A++ + + + G+++ G + K E + + LQ K+L + DV Y E+G + +E + ++L V I+EK L+ ++ +E+++D G +G ++ + +ELGAV+ L++ E+L R Sbjct: 137 YGLIVLDRREATVGLLKGKRIEVLDWDTSMVPGKHRQGGQSSVRFERLREIAIHEFYKKVGEMASEALL---PYKDKLIGILIGGPSPTKEEFYEGEYLHHELQKKVLGLFDVGYTDESGLYELVEKAKDVLQEVDIIREKNLMQRFLKEVARD-GLAAYGEEEVRRYIELGAVDTLLLSEDLRYER 319
BLAST of CX077777 vs. ExPASy Swiss-Prot
Match: RF11_METAC (Peptide chain release factor subunit 1-1 OS=Methanosarcina acetivorans GN=prf11 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.246e-22 Identity = 56/196 (28.57%), Postives = 102/196 (52.04%), Query Frame = 1 Query: 7 FGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATG 594 FG +V+D G L G + T +P K +GGQSA RF +LR+ H++ ++ + A++ F+ A ++ G+++ G + K E + LQ KIL + D +Y E+G ++ + + E L +++ + +K + +F+E+ D+GK +G LE+ AV++L++ E+L R K S G Sbjct: 141 FGLLVLDRREATIGLLVGKRIQAFRNLTSTVPGKQRKGGQSAHRFQQLRLIAIHDFYKRIGDAASEIFM--AVDHKDLKGVLIGGPSPTKEEFYGGEFLHHELQKKILGLFDTAYTDESGLSELVNAAGEKLQDLELMGQKNAVRDFFKELIADSGKVAYGETQVRANLEINAVDVLLLSEDLRAERVTTKCSVCG 334
BLAST of CX077777 vs. ExPASy Swiss-Prot
Match: RF1_METTH (Peptide chain release factor subunit 1 OS=Methanobacterium thermoautotrophicum GN=prf1 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22 Identity = 58/198 (29.29%), Postives = 101/198 (51.01%), Query Frame = 1 Query: 1 DKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATG 594 + +G V+D TL G ++L T +P KH GGQS RF RL H ++++ E + F+ ++ G+IL G K E D L+ K++ VD SY GE G + I+ S ++LS + ++EK+L+ ++ E+ + G +G + + L++GAVE+L++ E+L R + ++ G Sbjct: 140 ETYGLAVLDRKEATIATLKGKRIDILKTLTSGVPGKHKAGGQSQRRFDRLIDLAAHEFLKRIGEHMNEAFLQI----DDLKGIILGGPGHTKEEFLNGDYLHHELKKKVITTVDTSYTGEFGIREVIDKSMDVLSEIDVMREKKLVQRFLRELINEDGLASYGEREVRQHLQMGAVEVLLLSEDLKYQRGTYECASCG 333
BLAST of CX077777 vs. ExPASy Swiss-Prot
Match: RF12_METAC (Peptide chain release factor subunit 1-2 OS=Methanosarcina acetivorans GN=prf12 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.055e-21 Identity = 55/196 (28.06%), Postives = 105/196 (53.57%), Query Frame = 1 Query: 7 FGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATG 594 +G +++D G L G EV+ +P K +GGQSA RF +LR H++ ++ + ++ F+ ++ + G+++ G + K E ++ LQ K+L + D Y E+GF++ I + E L ++ +++K+ + +F+EI+ ++GK +G D+ LE+ AV++L++ E L R LK G Sbjct: 141 YGLLLLDLREATIGMLVGRQTEVIKHLHSTVPGKQRKGGQSAHRFEQLRRIAIHDFYKRIGDATSEAFLELDPAE--LKGILIGGHSPTKEEFNEGGFLHYELQKKVLGLFDTGYTDESGFSELINAAEETLQSIDLLKQKKDMEIFFKEIATESGKISYGEDNVRANLEIKAVDVLLLSEELRAERVTLKCRVCG 334
BLAST of CX077777 vs. ExPASy Swiss-Prot
Match: RF1_METS3 (Peptide chain release factor subunit 1 OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=prf1 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21 Identity = 63/206 (30.58%), Postives = 106/206 (51.46%), Query Frame = 1 Query: 1 DKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATG---EIVIK 609 + +G V+D TL G +L+ T +P KH GGQS RF R+ H + ++ E + F+ + + G+I+ G K E + D + ++ KI+ VD SY GE G + I+ SA+IL+++ +QEK+++ K+ E+ +D G +G + L +GAV+ L++ E+L R V K + G EI +K Sbjct: 140 ETYGLAVIDRKEATIATLRGKKVNILNHLTSGVPGKHKAGGQSQRRFDRVIDLAAHEFKKRIGEHMNEDFL----ALEELEGVIIGGPGFTKEEFVKGDYLNYEIKDKIIATVDTSYTGEFGIREVIDKSADILNDLDVMQEKKVVQKFLHELVKDKGLASYGEREVRTNLIMGAVDTLLLSEDLTAMRKVFKCPSCGNEEEITVK 341
BLAST of CX077777 vs. ExPASy Swiss-Prot
Match: RF1_METMA (Peptide chain release factor subunit 1 OS=Methanosarcina mazei GN=prf1 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21 Identity = 53/196 (27.04%), Postives = 101/196 (51.53%), Query Frame = 1 Query: 7 FGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATG 594 +G +V+D G L G + T +P K +GGQSA RF +LR+ H++ ++ + A++ F+ A ++ G+++ G + K E + L KIL + D +Y E+G ++ + + E L +++ + +K + +F+E+ D+GK +G LE+ +V++L++ E+L R K S G Sbjct: 141 YGLLVLDRREATIGLLVGKRIQPFRNLTSTVPGKQRKGGQSAHRFQQLRLIAIHDFYKRIGDAASEVFM--AVDHKDLKGVLIGGPSPTKEEFHAGEFLHHELMKKILGLFDTAYTDESGLSELVNAAGEKLQDLELMGQKNAVRDFFKELIADSGKVAYGESQVRANLEINSVDVLLLSEDLRAERVTTKCSVCG 334 The following BLAST results are available for this feature:
BLAST of CX077777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CX077777 ID=CX077777; Name=CX077777; organism=Citrus sinensis; type=EST; length=698bpback to top |