CX077761

Overview
NameCX077761
Unique NameCX077761
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX077761 vs. ExPASy Swiss-Prot
Match: PPIB_ASPOR (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus oryzae GN=cpr2 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.136e-33
Identity = 65/109 (59.63%), Postives = 82/109 (75.23%), Query Frame = 2
Query:  386 VFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFI 712
            V+FD++ G KP GR+V+GL+G  VPKTAENFRAL TGEKG+GY+G +FHR+IK+FMIQ             SIYG  F+DE+F ++H   G+LSMANAG +TNGSQFFI
Sbjct:   22 VYFDIEHGNKPLGRVVLGLYGKTVPKTAENFRALATGEKGFGYEGSTFHRVIKEFMIQGGDFTRGDGTGGKSIYGEKFKDENFKIRHTKKGLLSMANAGKDTNGSQFFI 130          
BLAST of CX077761 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.013e-33
Identity = 72/117 (61.54%), Postives = 80/117 (68.38%), Query Frame = 2
Query:  383 KVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG-------YKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFI 712
            +VFFD+ +GG PAGRIVM L+ + VPKTAENFRALCTGEKG G       YKG +FHR+I +FM Q             SIYG  F DE FV K   PGVLSMANAGPNTNGSQFFI
Sbjct:    5 RVFFDMTVGGAPAGRIVMELYANEVPKTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFPDEKFVRKQPAPGVLSMANAGPNTNGSQFFI 121          
BLAST of CX077761 vs. ExPASy Swiss-Prot
Match: CP18C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Arabidopsis thaliana GN=CYP18-3 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.367e-32
Identity = 71/117 (60.68%), Postives = 81/117 (69.23%), Query Frame = 2
Query:  383 KVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG-------YKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFI 712
            KV+FD+ I G+PAGRIVM L+ D  P+TAENFRALCTGEKG G       +KG  FHR+I +FM Q             SIYGS FEDE+F  KH GPG+LSMANAG NTNGSQFFI
Sbjct:    5 KVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFI 121          
BLAST of CX077761 vs. ExPASy Swiss-Prot
Match: PPI2_SYNY3 (Peptidyl-prolyl cis-trans isomerase slr1251 OS=Synechocystis sp. (strain PCC 6803) GN=slr1251 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.785e-32
Identity = 72/118 (61.02%), Postives = 80/118 (67.80%), Query Frame = 2
Query:  380 TKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG-------YKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFI 712
            +KVFFD+ IG   AGRIVM LF +V PKTAENFRALCTGEKG G       +KG  FHR+I DFM Q             SIYG  F DE+F LKH  PG+LSMANAGPNTNGSQFF+
Sbjct:    3 SKVFFDITIGSDTAGRIVMELFDEVTPKTAENFRALCTGEKGVGKAGKPLHFKGSHFHRVITDFMAQGGDFTRGNGTGGESIYGEKFADENFQLKHDRPGLLSMANAGPNTNGSQFFL 120          
BLAST of CX077761 vs. ExPASy Swiss-Prot
Match: RBP2_MOUSE (E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.332e-32
Identity = 67/118 (56.78%), Postives = 80/118 (67.80%), Query Frame = 2
Query:  359 ELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFI 712
            EL       VFFDV   G+P GRI+M LF ++VP+TAENFRALCTGEKG+G+K   FHR++ DF+ Q             SIYG  F+DE+F LKH GPG+LSMAN G NTN SQFFI
Sbjct: 2886 ELSKDTNPVVFFDVCADGEPLGRIIMELFSNIVPQTAENFRALCTGEKGFGFKNSIFHRVVPDFICQGGDITKYNGTGGQSIYGDKFDDENFDLKHTGPGLLSMANYGQNTNSSQFFI 3003          
BLAST of CX077761 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.332e-32
Identity = 69/117 (58.97%), Postives = 82/117 (70.09%), Query Frame = 2
Query:  383 KVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG-------YKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFI 712
            +V+FD+ IGGK  GRI M L+ D+VPKTA+NFR+LCTGEKG G       YKG  FHR+IK FMIQ             SIYG+ F+DE+F +KH  P +LSMANAGPNTNGSQFFI
Sbjct:   12 RVYFDISIGGKSVGRITMELYADLVPKTADNFRSLCTGEKGIGKSGKPLHYKGSVFHRVIKQFMIQGGDFTAGDGTGGESIYGNKFDDEAFPIKHEKPFLLSMANAGPNTNGSQFFI 128          
BLAST of CX077761 vs. ExPASy Swiss-Prot
Match: PPIA_CANAL (Peptidyl-prolyl cis-trans isomerase OS=Candida albicans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.332e-32
Identity = 67/109 (61.47%), Postives = 78/109 (71.56%), Query Frame = 2
Query:  386 VFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFI 712
            V+FDV   G+  G+I   L+ DVVPKTAENFRALCTGEKG+GYKG  FHR+I  FM+Q             SIYG+ F DE+FV +H  PG+LSMANAGPNTNGSQFFI
Sbjct:    4 VYFDVSADGQKLGKITFKLYDDVVPKTAENFRALCTGEKGFGYKGSIFHRVIPQFMLQGGDFTNFNGTGGKSIYGTKFADENFVKRHDRPGLLSMANAGPNTNGSQFFI 112          
BLAST of CX077761 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.332e-32
Identity = 69/117 (58.97%), Postives = 80/117 (68.38%), Query Frame = 2
Query:  383 KVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG-------YKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFI 712
            KVFFD+ I G PAGRIVM L+ D  P+TAENFRALCTGEKG G       YKG +FHR+I +FM Q             SIYG+ F DE+F+ +H GPG+LSMANAG  TNGSQFFI
Sbjct:    5 KVFFDMAIAGNPAGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTFHRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFFI 121          
BLAST of CX077761 vs. ExPASy Swiss-Prot
Match: PPIE_SCHJA (Peptidyl-prolyl cis-trans isomerase E (Fragment) OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.045e-32
Identity = 67/116 (57.76%), Postives = 80/116 (68.97%), Query Frame = 2
Query:  365 QAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFI 712
            Q +   +VFFD+ IG    GRIVM L  D+VP+TAENFRALCTG++G+GY  C FHR+I  FM Q             SIYG  F+DE+F L+H G GVLSMAN+GPNTNGSQFFI
Sbjct:   13 QKRNLPRVFFDIRIGNADRGRIVMELRSDIVPRTAENFRALCTGDRGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFI 128          
BLAST of CX077761 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.045e-32
Identity = 70/120 (58.33%), Postives = 81/120 (67.50%), Query Frame = 2
Query:  374 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG-------YKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFI 712
            V  KV+FD+ +G K AGRIVM L+ D VP+TAENFRALCTGE+G G       YKG +FHR+I  FM Q             SIYG  F+DE+FV KH GPG+LSM NAG NTNGSQFFI
Sbjct:    2 VNPKVYFDMTVGDKAAGRIVMELYADTVPETAENFRALCTGERGIGKSGKPLHYKGSAFHRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKKHTGPGILSMRNAGSNTNGSQFFI 121          
The following BLAST results are available for this feature:
BLAST of CX077761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
PPIB_ASPOR6.136e-3359.63Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
CYPH_MAIZE8.013e-3361.54Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN... [more]
CP18C_ARATH1.367e-3260.68Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Ara... [more]
PPI2_SYNY31.785e-3261.02Peptidyl-prolyl cis-trans isomerase slr1251 OS=Syn... [more]
RBP2_MOUSE2.332e-3256.78E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=R... [more]
PPID_GIBZE2.332e-3258.97Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
PPIA_CANAL2.332e-3261.47Peptidyl-prolyl cis-trans isomerase OS=Candida alb... [more]
CYPH_LUPLU2.332e-3258.97Peptidyl-prolyl cis-trans isomerase OS=Lupinus lut... [more]
PPIE_SCHJA3.045e-3257.76Peptidyl-prolyl cis-trans isomerase E (Fragment) O... [more]
CYPH_BRANA3.045e-3258.33Peptidyl-prolyl cis-trans isomerase OS=Brassica na... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_58H02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-58H02-P3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077761 ID=CX077761; Name=CX077761; organism=Citrus sinensis; type=EST; length=713bp
CTTCTTATTAGTTATCACTGGCTGCAGGCTCCAGCTGCGGCGAATTTGGG
CGACCCCTATTACCTAATCCATTGTTATGGCTTCTACTGTCTCTACTCAG
ATGCGGCTACATAGCCCCGCCCTCATTTTCCAGGGCAGTTATAGCCAAGG
TGTTGCAAATGTTTGTATGCTACCTATGACGTCTAGCATTACAAATTCGC
AGTCAGGTCATTGCCCAGCTTCTACTTTGAAGTTGTCTGGAAGAGCATTG
ACATCAAGATCCCACTATGCATCAAGCTTTCCCATCGTACAGCTTTCTAA
AGCACCTTCTGTTAAGTATCGAAGAATGTTCTGTGTCAACTCAATGGCAA
AGGATGTAGAGCTGCAAGCAAAAGTGACAACCAAAGTTTTCTTTGACGTA
GATATTGGAGGTAAACCTGCAGGTAGAATAGTAATGGGCCTTTTTGGAGA
TGTTGTTCCGAAAACAGCTGAGAACTTTCGTGCACTGTGTACAGGTGAGA
AAGGATATGGTTACAAAGGATGCTCCTTCCACCGTATTATTAAAGATTTT
ATGATCCAGGGAGGGGACTTCACTGAGGGAGATGGAACTGGAGGCATCAG
TATTTATGGTTCCAGCTTTGAAGATGAGAGCTTTGTCTTGAAGCATGTTG
GACCTGGAGTATTAAGCATGGCCAATGCAGGTCCTAATACCAATGGGAGC
CAATTTTTCATTT
back to top