CX077760

Overview
NameCX077760
Unique NameCX077760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length766
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX077760 vs. ExPASy Swiss-Prot
Match: PPIC_BOVIN (Peptidyl-prolyl cis-trans isomerase C OS=Bos taurus GN=PPIC PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.507e-51
Identity = 103/164 (62.80%), Postives = 115/164 (70.12%), Query Frame = -1
Query:  215 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGEL 706
            VT KVFFDV IG K  GRIV+GLFG VVPKT ENF AL TGEKGYGYKG  FHR+IKDFMIQ           GISIYG +F DE+F LKH G G +SMANAGP+TNGSQFFI   K  WLD +HVVFG V+DGM VV  +E   T   D P   C I+NSG++
Sbjct:   36 VTAKVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYGYKGSKFHRVIKDFMIQGGDFTRGDGTGGISIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVVHSIELQATDGHDRPFTDCSIVNSGKI 199          
BLAST of CX077760 vs. ExPASy Swiss-Prot
Match: PPIB_RAT (Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus GN=Ppib PE=2 SV=3)

HSP 1 Score: 202.216 bits (513), Expect = 2.571e-51
Identity = 100/178 (56.18%), Postives = 123/178 (69.10%), Query Frame = -1
Query:  206 SMAKDVELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGELPLD 739
            S+A D +   KVT KV+FD  IG +P GR+  GLFG  VPKT +NF AL TGEKG+GYK   FHR+IKDFMIQ           G SIYG  F DE+F LKH GPG +SMANAG +TNGSQFFI TVKT WLD +HVVFG V++GMDVVRK+E+ +T   D P     I++ G++ ++
Sbjct:   31 SVANDKKKGPKVTVKVYFDFQIGDEPVGRVTFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVENTKTDSRDKPLKDVIIVDCGKIEVE 208          
BLAST of CX077760 vs. ExPASy Swiss-Prot
Match: PPIB_NEUCR (Peptidyl-prolyl cis-trans isomerase B OS=Neurospora crassa GN=cpr-2 PE=3 SV=3)

HSP 1 Score: 202.216 bits (513), Expect = 2.571e-51
Identity = 100/165 (60.61%), Postives = 119/165 (72.12%), Query Frame = -1
Query:  215 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGEL 709
            K+T KV+FD++ G KP GRIVMGL+G  VPKTAENFRAL TGEKG+GY+G +FHR+IK FMIQ           G SIYG  F DE+F LKH   G+LSMANAG +TNGSQFFI TV T WLD +HVVFG V++G DVV K+E+ +T   D P  P +I  SGEL
Sbjct:   32 KITHKVYFDIEQGDKPLGRIVMGLYGKTVPKTAENFRALATGEKGFGYEGSTFHRVIKQFMIQGGDFTKGDGTGGKSIYGDKFPDENFKLKHSKKGLLSMANAGKDTNGSQFFITTVITSWLDGKHVVFGEVLEGYDVVEKIENTKTGPRDAPAEPIKIAKSGEL 196          
BLAST of CX077760 vs. ExPASy Swiss-Prot
Match: PPIC_MOUSE (Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus GN=Ppic PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.358e-51
Identity = 102/164 (62.20%), Postives = 116/164 (70.73%), Query Frame = -1
Query:  215 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGEL 706
            VT KVFFDV IG K  GRIV+GLFG+VVPKT ENF AL TGEKGYGYKG  FHR+IKDFMIQ           G+SIYG +F DE+F LKH G G +SMANAGP+TNGSQFFI   K  WLD +HVVFG V+DGM VV  +E   T   D P   C I+NSG++
Sbjct:   36 VTDKVFFDVRIGDKDVGRIVIGLFGNVVPKTVENFVALATGEKGYGYKGSIFHRVIKDFMIQGGDFTARDGTGGMSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVVHSIELQATDGHDRPLTDCTIVNSGKI 199          
BLAST of CX077760 vs. ExPASy Swiss-Prot
Match: CP19D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Arabidopsis thaliana GN=CYP19-4 PE=1 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 4.385e-51
Identity = 108/174 (62.07%), Postives = 122/174 (70.11%), Query Frame = -1
Query:  209 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG-------YKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGELPL 709
            +VT KV+FDV+I GK AGR+V+GLFG  VPKTAENFRALCTGEKG G       YKG  FHRII  FMIQ           G SIYG  F DE+F LKH GPGVLSMAN+G +TNGSQFFI TV T WLD RHVVFG V+ GMDVV K+E+ E  ++  PK    I +SGELPL
Sbjct:   29 EVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEA-EGKQSGTPKSKVVIADSGELPL 201          
BLAST of CX077760 vs. ExPASy Swiss-Prot
Match: CYP1_CAEEL (Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhabditis elegans GN=cyn-1 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.727e-51
Identity = 106/168 (63.10%), Postives = 118/168 (70.24%), Query Frame = -1
Query:  215 KVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYG-------YKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGEL 697
            KVFFDV IG +PAGR+ M LF DVVPKTAENFRALCTGEKG G       +KG  FHRII +FMIQ           G SIYG+ F+DE+F LKH GPG LSMANAGPNTNGSQFFICTV TPWLD  HVVFG V DGM VV+K+E +  SR+  P     I + GEL
Sbjct:   23 KVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRIIPEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSMANAGPNTNGSQFFICTVDTPWLDGGHVVFGQVTDGMSVVKKIEKM-GSRSGAPAKTVTIADCGEL 189          
BLAST of CX077760 vs. ExPASy Swiss-Prot
Match: PPIA1_RHIOR (Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus oryzae GN=cyp2 PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 7.480e-51
Identity = 101/161 (62.73%), Postives = 116/161 (72.05%), Query Frame = -1
Query:  215 KVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGEL 697
            KVFFDV    KP GRIVM L  DVVP+TAENFRALCTGEKG+GYKGCSFHR+I +FM+Q           G SIYG+ F DE+F LKH GPG LSMANAGPNTNGSQFFI T+K  WLD +HVVFG V +GMDVV+ +ES+  S    P+    I N G+L
Sbjct:    5 KVFFDVSANSKPLGRIVMELRADVVPQTAENFRALCTGEKGFGYKGCSFHRVIPEFMLQGGDFTNHNGTGGKSIYGNKFRDENFTLKHTGPGDLSMANAGPNTNGSQFFITTIKCSWLDGKHVVFGRVTEGMDVVQNIESL-GSPNGTPRAKIIIDNCGQL 164          
BLAST of CX077760 vs. ExPASy Swiss-Prot
Match: PPIB_CHICK (Peptidyl-prolyl cis-trans isomerase B OS=Gallus gallus GN=PPIB PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.769e-51
Identity = 101/178 (56.74%), Postives = 124/178 (69.66%), Query Frame = -1
Query:  206 SMAKDVELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGELPLD 739
            S A + +   KVT KVFFD+ +G + AGR+V+GLFG  VPKT ENF AL TGEKG+G+KG  FHR+IKDFMIQ           G SIYG  F DE+F LKH GPG +SMANAG +TNGSQFFI TVKT WLD +HVVFG V++GMDVVRK+E+ +T   D P     I + G + ++
Sbjct:   22 SRADERKKGPKVTAKVFFDLRVGEEDAGRVVIGLFGKTVPKTVENFVALATGEKGFGFKGSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGDRFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVENTKTDSRDKPLKDVTIADCGTIEVE 199          
BLAST of CX077760 vs. ExPASy Swiss-Prot
Match: PPIA_BLAGE (Peptidyl-prolyl cis-trans isomerase OS=Blattella germanica GN=CYPA PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.769e-51
Identity = 97/141 (68.79%), Postives = 110/141 (78.01%), Query Frame = -1
Query:  275 KVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESV 697
            +VFFD+   G+P GRIVM L  DVVPKTAENFRALCTGEKG+GYKG  FHR+I +FM Q           G SIYG+ FEDE+F LKH GPG+L MANAGPNTNGSQFFI T KT WLDNRHVVFG V++GMDVV+KLES+
Sbjct:    5 RVFFDMSADGQPVGRIVMELRSDVVPKTAENFRALCTGEKGFGYKGSRFHRVIPNFMCQGGDFTNHNGTGGKSIYGTKFEDENFQLKHTGPGILWMANAGPNTNGSQFFITTAKTSWLDNRHVVFGSVVEGMDVVKKLESL 145          
BLAST of CX077760 vs. ExPASy Swiss-Prot
Match: PPIF_RAT (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Rattus norvegicus GN=Ppif PE=1 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.276e-50
Identity = 96/139 (69.06%), Postives = 109/139 (78.42%), Query Frame = -1
Query:  278 VFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLES 694
            V+ DV   G+P GR+V+ L  DVVPKTAENFRALCTGEKG+GYKG +FHR+I  FM Q           G SIYGS F DE+F LKHVGPGVLSMANAGPNTNGSQFFICT+KT WLD +HVVFGHV +GMDVV+K+ES
Sbjct:   47 VYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPAFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIES 185          
The following BLAST results are available for this feature:
BLAST of CX077760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 234
Match NameE-valueIdentityDescription
PPIC_BOVIN1.507e-5162.80Peptidyl-prolyl cis-trans isomerase C OS=Bos tauru... [more]
PPIB_RAT2.571e-5156.18Peptidyl-prolyl cis-trans isomerase B OS=Rattus no... [more]
PPIB_NEUCR2.571e-5160.61Peptidyl-prolyl cis-trans isomerase B OS=Neurospor... [more]
PPIC_MOUSE3.358e-5162.20Peptidyl-prolyl cis-trans isomerase C OS=Mus muscu... [more]
CP19D_ARATH4.385e-5162.07Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Ara... [more]
CYP1_CAEEL5.727e-5163.10Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhab... [more]
PPIA1_RHIOR7.480e-5162.73Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus... [more]
PPIB_CHICK9.769e-5156.74Peptidyl-prolyl cis-trans isomerase B OS=Gallus ga... [more]
PPIA_BLAGE9.769e-5168.79Peptidyl-prolyl cis-trans isomerase OS=Blattella g... [more]
PPIF_RAT1.276e-5069.06Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_58H02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-58H02-P3-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077760 ID=CX077760; Name=CX077760; organism=Citrus sinensis; type=EST; length=766bp
TTTTTTTCAACCGAACAATAGTACATATTCAGCTCTACCATGAGCTTACC
GAGTATTATTCTTGAGTTTCTCAGCTAATTCAACTAAGCGGAACATGCTT
TCATGTAGATAACAGTTACAAAAACCATTTGGCTCCACAAAAGTGATGAA
TTACAAAAGTCGTATTTTATGGTTGTGGTAAGATATCAGAGCTGGCAGAT
CAGGCATCTAATGGTAGTTCTCCACTATTGATAATTCTACATGGCACCTT
TGGGTAATCTGTCCTGCTTGTCTCTACAGATTCAAGTTTCCTCACAACGT
CCATTCCATCAATGACATGTCCAAACACAACATGGCGGTTGTCCAACCAT
GGTGTCTTCACTGTGCAAATGAAAAATTGGCTCCCATTGGTATTAGGACC
TGCATTGGCCATGCTTAATACTCCAGGTCCAACATGCTTCAAGACAAAGC
TCTCATCTTCAAAGCTGGAACCATAAATACTGATGCCTCCAGTTCCATCT
CCCTCAGTGAAGTCCCCTCCCTGGATCATAAAATCTTTAATAATACGGTG
GAAGGAGCATCCTTTGTAACCATATCCTTTCTCACCTGTACACAGTGCAC
GAAAGTTCTCAGCTGTTTTCGGAACAACATCTCCAAAAAGGCCCATTACT
ATTCTACCTGCAGGTTTACCTCCAATATCTACGTCAAAGAAAACTTTGGT
TGTCACTTTTGCTTGCAGCTCTACATCCTTTGCCATTGAGTTGACACAGA
ACATTCTTCGATACTT
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