EY702284

Overview
NameEY702284
Unique NameEY702284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_PROM0 (Elongation factor Ts OS=Prochlorococcus marinus (strain MIT 9301) GN=tsf PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.967e-24
Identity = 55/84 (65.48%), Postives = 64/84 (76.19%), Query Frame = 1
Query:   13 KEDLLSKPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAA 264
            ++DL  KPEQI+ KIVEGRI KRL EL LL QPYIK+  + V+D VKQ  A IGENIKV+RF RY LGEG+EK   DFA EVA+
Sbjct:  131 RDDLSGKPEQIKEKIVEGRIAKRLNELVLLSQPYIKDSSLTVEDLVKQAAAKIGENIKVRRFTRYTLGEGIEKNQIDFAEEVAS 214          

HSP 2 Score: 108.997 bits (271), Expect = 3.458e-23
Identity = 59/99 (59.60%), Postives = 79/99 (79.80%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNFGG*K*QISRSWVIDLTMQ 642
            ++A LVK LR++TGAGMMDCKKAL+ET G+L+KA E+LRKKG++ A+KKSGR+A EG IGSYI   SR GVL+E +CET+F   +  I +S + D++MQ
Sbjct:    4 ITAKLVKDLRDKTGAGMMDCKKALNETEGNLDKALEWLRKKGIASAEKKSGRVAAEGSIGSYIHTGSRVGVLLELNCETDFVA-RGDIFQSLLKDVSMQ 101          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_SYNSC (Elongation factor Ts OS=Synechococcus sp. (strain CC9605) GN=tsf PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.099e-24
Identity = 54/88 (61.36%), Postives = 68/88 (77.27%), Query Frame = 1
Query:   13 KEDLLSKPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAAQTAA 276
            ++DL  KPEQ++ KIVEGRI KRL+ELAL+EQP+IK+  + V D VKQT   IGEN+KV+RF RY LGEG+E +  DFAAEVA+   A
Sbjct:  132 RDDLEGKPEQMKEKIVEGRIGKRLKELALMEQPFIKDSSITVADLVKQTAGKIGENVKVRRFTRYTLGEGIEVEENDFAAEVASMQNA 219          

HSP 2 Score: 107.071 bits (266), Expect = 1.314e-22
Identity = 59/102 (57.84%), Postives = 78/102 (76.47%), Query Frame = 1
Query:  340 AVAVSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNFGG*K*QISRSWVIDLTMQ 642
            A AVSA LVK+LR++TGAGMMDCKKAL+ T GD  KA E+LR+KG++ A+KKSGR A EG IGSYI   +R GVL+E +CET+F   +  + +S + D++MQ
Sbjct:    2 AAAVSAKLVKELRDKTGAGMMDCKKALAATEGDANKAVEWLRQKGIASAEKKSGRTAAEGAIGSYIHTGARVGVLVEVNCETDFVA-RGDMFQSLLRDVSMQ 102          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_PROM2 (Elongation factor Ts OS=Prochlorococcus marinus (strain MIT 9215) GN=tsf PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.099e-24
Identity = 54/84 (64.29%), Postives = 64/84 (76.19%), Query Frame = 1
Query:   13 KEDLLSKPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAA 264
            ++DL  KPEQI+ KIVEGRI KRL EL LL QPYIK+  + V++ VKQ  A IGENIKV+RF RY LGEG+EK   DFA EVA+
Sbjct:  131 RDDLSGKPEQIKEKIVEGRIAKRLNELVLLSQPYIKDSSLTVEELVKQAAAKIGENIKVRRFTRYTLGEGIEKNQMDFAEEVAS 214          

HSP 2 Score: 108.997 bits (271), Expect = 3.458e-23
Identity = 59/99 (59.60%), Postives = 79/99 (79.80%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNFGG*K*QISRSWVIDLTMQ 642
            ++A LVK LR++TGAGMMDCKKAL+ET G+L+KA E+LRKKG++ A+KKSGR+A EG IGSYI   SR GVL+E +CET+F   +  I +S + D++MQ
Sbjct:    4 ITAKLVKDLRDKTGAGMMDCKKALNETEGNLDKALEWLRKKGIASAEKKSGRVAAEGSIGSYIHTGSRVGVLLELNCETDFVA-RGDIFQSLLKDVSMQ 101          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_PROM5 (Elongation factor Ts OS=Prochlorococcus marinus (strain MIT 9515) GN=tsf PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.552e-23
Identity = 54/84 (64.29%), Postives = 63/84 (75.00%), Query Frame = 1
Query:   13 KEDLLSKPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAA 264
            ++DL  KPE I+ KIVEGRI KRL EL LL QPYIK+  + V+D VKQ  A IGENIKV+RF RY LGEG+EK   DFA EVA+
Sbjct:  131 RDDLSGKPENIKEKIVEGRIAKRLNELVLLSQPYIKDSSLTVEDLVKQAAAKIGENIKVRRFTRYTLGEGIEKNEMDFADEVAS 214          

HSP 2 Score: 109.383 bits (272), Expect = 2.648e-23
Identity = 59/99 (59.60%), Postives = 79/99 (79.80%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNFGG*K*QISRSWVIDLTMQ 642
            ++A LVK LR++TGAGMMDCKKAL+ET G++EKA E+LRKKG++ A+KKSGR+A EG IGSYI   SR GVL+E +CET+F   +  I +S + D++MQ
Sbjct:    4 ITAKLVKDLRDKTGAGMMDCKKALNETDGNVEKALEWLRKKGIASAEKKSGRVAAEGSIGSYIHTGSRVGVLLELNCETDFVA-RGDIFQSLLKDVSMQ 101          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_PROMP (Elongation factor Ts OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=tsf PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.027e-23
Identity = 54/84 (64.29%), Postives = 63/84 (75.00%), Query Frame = 1
Query:   13 KEDLLSKPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAA 264
            ++DL  KPE I+ KIVEGRI KRL EL LL QPYIK+  + V+D VKQ  A IGENIKV+RF RY LGEG+EK   DFA EVA+
Sbjct:  131 RDDLSGKPENIKEKIVEGRIAKRLNELVLLSQPYIKDSALTVEDLVKQAAAKIGENIKVRRFTRYTLGEGIEKNEMDFADEVAS 214          

HSP 2 Score: 109.383 bits (272), Expect = 2.648e-23
Identity = 59/99 (59.60%), Postives = 79/99 (79.80%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNFGG*K*QISRSWVIDLTMQ 642
            ++A LVK LR++TGAGMMDCKKAL+ET G++EKA E+LRKKG++ A+KKSGR+A EG IGSYI   SR GVL+E +CET+F   +  I +S + D++MQ
Sbjct:    4 ITAKLVKDLRDKTGAGMMDCKKALNETDGNVEKALEWLRKKGIASAEKKSGRVAAEGSIGSYIHTGSRVGVLLELNCETDFVA-RGDIFQSLLKDVSMQ 101          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_SYNPX (Elongation factor Ts OS=Synechococcus sp. (strain WH8102) GN=tsf PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.458e-23
Identity = 53/88 (60.23%), Postives = 69/88 (78.41%), Query Frame = 1
Query:   13 KEDLLSKPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAAQTAA 276
            ++DL  KPEQ++ KIVEGRI KRL+ELAL+EQP+IK+  + V + VKQT   IGEN++V+RF RY LGEG+E +  DFAAEVA+  AA
Sbjct:  131 RDDLDGKPEQMKVKIVEGRIGKRLKELALMEQPFIKDSSITVTELVKQTAGKIGENVQVRRFTRYTLGEGIEVEESDFAAEVASMKAA 218          

HSP 2 Score: 103.605 bits (257), Expect = 1.453e-21
Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = 1
Query:  346 AVSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNF 588
            AVSA LVK LR++TGAGMMDCKKAL+ T GD  KA E+LR+KG++ A+KKSGR A EG I SYI   SR GVLIE +CET+F
Sbjct:    3 AVSAKLVKDLRDKTGAGMMDCKKALAATDGDANKAVEWLRQKGIASAEKKSGRTAAEGAISSYIHTGSRVGVLIEINCETDF 84          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_PROMA (Elongation factor Ts OS=Prochlorococcus marinus GN=tsf PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.458e-23
Identity = 51/87 (58.62%), Postives = 69/87 (79.31%), Query Frame = 1
Query:   13 KEDLLSKPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAAQTA 273
            ++DL  KPEQI++KIVEGRI KRL+ELAL+EQP+I++  + V+  VKQ    IGEN+KV+RF RY LGEG+E +  DFAAEVA+ ++
Sbjct:  131 RDDLAGKPEQIKTKIVEGRIGKRLKELALIEQPFIRDSSITVEQLVKQVAGQIGENVKVRRFTRYTLGEGIEVEESDFAAEVASMSS 217          

HSP 2 Score: 107.842 bits (268), Expect = 7.703e-23
Identity = 54/82 (65.85%), Postives = 69/82 (84.15%), Query Frame = 1
Query:  346 AVSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNF 588
            +++A LVK LR++TGAGMMDCKKAL+ET GD+ KA E+LR+KG++ A+KKSGR+A EG IGSYI   SR GVLIE +CET+F
Sbjct:    3 SITAKLVKDLRDKTGAGMMDCKKALAETSGDISKAVEWLRQKGIASAEKKSGRVAAEGAIGSYIHTGSRVGVLIELNCETDF 84          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_CYAP8 (Elongation factor Ts OS=Cyanothece sp. (strain PCC 8801) GN=tsf PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.516e-23
Identity = 55/113 (48.67%), Postives = 81/113 (71.68%), Query Frame = 1
Query:   13 KEDLLSKPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEV---AAQTAAKPIAKEQPAPAETKETVEKPPA 342
            ++DL +KP+ I+ KIV+GRI KR++EL LL+QPYI++  + V++ +KQTIA +GENI+V+RF R+ LGEG+EK+  DFA EV   A Q A +  +  + A A ++ T EK  A
Sbjct:  131 RDDLGNKPDNIKEKIVQGRIEKRIKELCLLDQPYIRDQNVTVEELIKQTIAQLGENIQVRRFTRFVLGEGIEKQEVDFAREVAEQAGQLAPEAESTTETADATSETTTEKSSA 243          

HSP 2 Score: 95.9005 bits (237), Expect = 3.029e-19
Identity = 49/81 (60.49%), Postives = 61/81 (75.31%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNF 588
            +SA  VK+LRE TGAGMMDCKKAL E  GD+ KA E+LR+KG++ A+KKSGR   EG + SYI    R GVL+E +CET+F
Sbjct:    4 ISAKQVKELRETTGAGMMDCKKALQENQGDMTKAIEWLRQKGITSAEKKSGRQTAEGLVESYIHTGGRIGVLVEVNCETDF 84          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_DESRM (Elongation factor Ts OS=Desulfotomaculum reducens (strain MI-1) GN=tsf PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.898e-23
Identity = 62/116 (53.45%), Postives = 83/116 (71.55%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNFGG*K*QISRSWVIDLTMQAVGLARKWDFLPLEKLS 693
            +SA++VK+LRE TGAGMMDCKKAL+E GGD+EKA E+LR+KGL+ A KK+GR+A EG + SYI    R GVL+E +CET+F   K +  R    D+ MQ    A K +F+  E++S
Sbjct:    4 ISASMVKELRERTGAGMMDCKKALAEVGGDMEKAIEFLREKGLAAAAKKAGRIAAEGVVESYIHGGGRIGVLVEINCETDFVA-KNEDFRGLAKDIAMQIA--AAKPEFVRREEVS 116          

HSP 2 Score: 95.1301 bits (235), Expect = 5.167e-19
Identity = 47/82 (57.32%), Postives = 60/82 (73.17%), Query Frame = 1
Query:   31 KPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAAQTAA 276
            KPE+I  K+VEGRI K  +E+ LLEQP+IK+    V+  + + IA IGE + V+RFVRY +GEGLEK+  DFAAEVAAQ  A
Sbjct:  136 KPEKIVEKMVEGRIEKFYKEVCLLEQPFIKDSDKTVQQVINEIIAKIGEKVDVRRFVRYEMGEGLEKRQDDFAAEVAAQIKA 217          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_PROMM (Elongation factor Ts OS=Prochlorococcus marinus (strain MIT 9313) GN=tsf PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.006e-22
Identity = 53/88 (60.23%), Postives = 65/88 (73.86%), Query Frame = 1
Query:   13 KEDLLSKPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAAQTAA 276
            ++DL  KPEQI++KIVEGRI KRL+EL LLEQP+I++  M V + VKQ    IGENIKV+RF RY LGEG+E    DFA EVA+   A
Sbjct:  131 RDDLSGKPEQIKAKIVEGRIGKRLKELVLLEQPFIRDSSMTVAELVKQVAGKIGENIKVRRFTRYTLGEGIEVDQTDFATEVASMKTA 218          

HSP 2 Score: 101.293 bits (251), Expect = 7.210e-21
Identity = 50/81 (61.73%), Postives = 67/81 (82.72%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNF 588
            VSA +VK LR++TGAGMMDCKKAL+E+ GD+ KA E+LR+KG++ A+KKS R+A EG IG+YI   +R GVL+E +CET+F
Sbjct:    4 VSAKIVKDLRDKTGAGMMDCKKALAESDGDMVKASEWLRQKGIASAEKKSSRIAAEGAIGTYIHTGARVGVLLELNCETDF 84          
The following BLAST results are available for this feature:
BLAST of EY702284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTS_PROM06.967e-2465.48Elongation factor Ts OS=Prochlorococcus marinus (s... [more]
EFTS_SYNSC9.099e-2461.36Elongation factor Ts OS=Synechococcus sp. (strain ... [more]
EFTS_PROM29.099e-2464.29Elongation factor Ts OS=Prochlorococcus marinus (s... [more]
EFTS_PROM51.552e-2364.29Elongation factor Ts OS=Prochlorococcus marinus (s... [more]
EFTS_PROMP2.027e-2364.29Elongation factor Ts OS=Prochlorococcus marinus su... [more]
EFTS_SYNPX3.458e-2360.23Elongation factor Ts OS=Synechococcus sp. (strain ... [more]
EFTS_PROMA3.458e-2358.62Elongation factor Ts OS=Prochlorococcus marinus GN... [more]
EFTS_CYAP84.516e-2348.67Elongation factor Ts OS=Cyanothece sp. (strain PCC... [more]
EFTS_DESRM5.898e-2353.45Elongation factor Ts OS=Desulfotomaculum reducens ... [more]
EFTS_PROMM1.006e-2260.23Elongation factor Ts OS=Prochlorococcus marinus (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-005-C04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702284 ID=EY702284; Name=EY702284; organism=Citrus sinensis; type=EST; length=846bp
CCACGCGTCCGGAAGGAAGATCTCTTGTCGAAACCAGAGCAGATCAGGTC
AAAGATTGTTGAAGGGCGGATCAGAAAGAGGCTTGAGGAGTTGGCATTGC
TTGAACAACCATACATTAAGAATGATAAGATGGTGGTAAAGGACTGGGTG
AAGCAAACCATTGCAACCATTGGAGAAAACATAAAAGTCAAAAGGTTTGT
GCGGTACAATCTTGGAGAGGGCTTGGAGAAGAAAAGCCAGGATTTTGCTG
CTGAGGTTGCTGCTCAGACTGCTGCAAAACCAATCGCAAAAGAACAGCCT
GCTCCAGCTGAAACAAAGGAAACTGTAGAGAAACCACCAGCAGTTGCAGT
CTCTGCTGCACTTGTTAAACAACTAAGGGAGGAAACAGGAGCAGGAATGA
TGGACTGCAAGAAAGCTCTCTCTGAAACTGGAGGGGATCTTGAGAAGGCA
CAGGAGTACCTCAGGAAAAAGGGTCTCTCTATTGCTGACAAGAAATCAGG
GCGGCTTGCACCGGAGGGGAAAATTGGGTCATATATTCCTGATTCTCGCT
TCGGAGTACTAATTGAAGGCCATTGTGAGACAAACTTTGGGGGGTAAAAA
TGACAAATTTCCAGGAGCTGGGTTATTGATCTAACAATGCAAGCTGTGGG
TTTGGCCCGGAAGTGGGATTTCTTACCCCTTGAAAAACTTTCCCGGAGGA
GCTTCTTAATTTAACAAACAGGAAACTTCAAATCCACAAGCGGGGGGCCC
TTTTTCCGAAACCTCCAAAAACTTTTGGACGGACATCTCTTGAAGGGAGC
GATCCTCCACACGCGTCTGGGGGGGCTTGCTCCTTTCCCACCCCCC
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