EY702284

Overview
NameEY702284
Unique NameEY702284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_MICAN (Elongation factor Ts OS=Microcystis aeruginosa (strain NIES-843) GN=tsf PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.006e-22
Identity = 56/115 (48.70%), Postives = 80/115 (69.57%), Query Frame = 1
Query:   13 KEDLLSKPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAA---QTAAKPIAKEQPAPAETKETVEK--PPA 342
            ++DL +KP+ I+ KIV GRI KRL+EL+LL+QP+I++  + + + +KQ IA +GENI+V+RF R+ LGEG+EK+  DFAAEVAA   Q A +P+A       +  E   K  PPA
Sbjct:  131 RDDLANKPDNIKEKIVAGRIEKRLKELSLLDQPFIRDQNISIDELLKQAIAALGENIQVRRFQRFVLGEGIEKEETDFAAEVAAQMGQKAPEPVAAAPQVEEKAPEPAAKDNPPA 245          

HSP 2 Score: 100.138 bits (248), Expect = 1.606e-20
Identity = 49/81 (60.49%), Postives = 66/81 (81.48%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNF 588
            ++A  VK+LRE+TGAGMMDCK+AL+E  GD+ KA E+LR+KG++ A+KK+ R+A EG IGSYI   SR GVL+E +CET+F
Sbjct:    4 ITAQQVKELREKTGAGMMDCKRALTENAGDITKAIEWLRQKGITSAEKKASRVAAEGMIGSYIHTGSRIGVLVEVNCETDF 84          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_GLOVI (Elongation factor Ts OS=Gloeobacter violaceus GN=tsf PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.006e-22
Identity = 53/90 (58.89%), Postives = 72/90 (80.00%), Query Frame = 1
Query:    7 VRKEDLLSKPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAAQTAA 276
            V++EDLLSKPE+IR++I +GR+ K  +E ALLEQP+IK+  + V + + Q IA IGENIKV+RF R+ LGEGLEK+ ++FA EVAAQT +
Sbjct:  129 VQREDLLSKPEKIRAQIAQGRVDKLFKERALLEQPFIKDQSISVGELITQKIAKIGENIKVRRFARFVLGEGLEKEEKNFAEEVAAQTGS 218          

HSP 2 Score: 85.8853 bits (211), Expect = 3.135e-16
Identity = 48/99 (48.48%), Postives = 67/99 (67.68%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNFGG*K*QISRSWVIDLTMQ 642
            +++ +V QLRE+T  G++DCKKAL+E  GDLEKA E LRKKG+  A K   ++A EG +GSYI    R GVL+E +C+T+F   K +  +  V D+ MQ
Sbjct:    4 ITSQMVMQLREKTQVGVLDCKKALAEAEGDLEKAIELLRKKGIMKAGKVKDKVATEGLVGSYIHTGGRIGVLVEVNCQTDFVA-KGEEFQQLVRDIAMQ 101          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_TRIEI (Elongation factor Ts OS=Trichodesmium erythraeum (strain IMS101) GN=tsf PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.314e-22
Identity = 49/89 (55.06%), Postives = 70/89 (78.65%), Query Frame = 1
Query:   13 KEDLLSKPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAAQTAAK 279
            +EDL +KPE IR KIV+GRI KRL+EL L++QPYI++    +++ +K+T A +GE ++V+RF+R+ LGEGLEK+  +FA EVAAQT  K
Sbjct:  131 REDLSNKPENIREKIVQGRIGKRLKELTLMDQPYIRDQNKTIEELIKETSAQLGEKVQVRRFIRFVLGEGLEKQESNFAEEVAAQTGKK 219          

HSP 2 Score: 95.1301 bits (235), Expect = 5.167e-19
Identity = 46/81 (56.79%), Postives = 64/81 (79.01%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNF 588
            +SA LVK+LRE+TGAGMMDCKKAL ET G+++KA ++LR+KG++ A K  G++A EG + SYI    R GVL+E +C+T+F
Sbjct:    4 ISAKLVKELREKTGAGMMDCKKALKETDGNIDKATDWLRQKGIASAGKLEGKVATEGLVESYIHTGGRIGVLVEVNCQTDF 84          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_ANASP (Elongation factor Ts OS=Anabaena sp. (strain PCC 7120) GN=tsf PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.716e-22
Identity = 52/89 (58.43%), Postives = 67/89 (75.28%), Query Frame = 1
Query:   13 KEDLLSKPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAAQTAAK 279
            KED+ +KPE IR KIV+GRI KRL+EL L++QPYI++  + V+D VKQ  A  GE ++V RFVRY LGEG+EK+  +FA EVAAQ   K
Sbjct:  225 KEDIANKPENIREKIVQGRIEKRLKELTLVDQPYIRDQSISVEDLVKQVKAKAGEEVEVSRFVRYILGEGIEKQESNFAEEVAAQMGVK 313          

HSP 2 Score: 98.2117 bits (243), Expect = 6.104e-20
Identity = 48/81 (59.26%), Postives = 66/81 (81.48%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNF 588
            +SA LV++LR++TGAGMMDCKKAL ET GD+E+A ++LRKKG++ A KKS R+A EG + +YI P  + GVLIE +C+T+F
Sbjct:    4 ISAKLVQELRQKTGAGMMDCKKALKETEGDVEQAIDWLRKKGIASAGKKSDRIAAEGLVDTYIQPGGKVGVLIEVNCQTDF 84          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_SYNS9 (Elongation factor Ts OS=Synechococcus sp. (strain CC9902) GN=tsf PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.241e-22
Identity = 51/88 (57.95%), Postives = 67/88 (76.14%), Query Frame = 1
Query:   13 KEDLLSKPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAAQTAA 276
            ++DL  KPE+++ KIVEGRI KRL+ELAL+EQP+IK+  + V + VKQ    IGEN+KV+RF RY LGEG+E +  DFAAEVA+   A
Sbjct:  131 RDDLEGKPEKMKEKIVEGRIAKRLKELALMEQPFIKDSSITVAELVKQAAGKIGENVKVRRFTRYTLGEGIEVEDNDFAAEVASMQNA 218          

HSP 2 Score: 105.531 bits (262), Expect = 3.823e-22
Identity = 54/82 (65.85%), Postives = 68/82 (82.93%), Query Frame = 1
Query:  346 AVSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNF 588
            AV+A LVK+LR++TGAGMMDCKKAL+ T GD +KA E+LR+KG++ A+KKSGR A EG IGSYI   +R GVLIE +CET+F
Sbjct:    3 AVTAKLVKELRDKTGAGMMDCKKALAATDGDTDKAVEWLRQKGIASAEKKSGRTAAEGSIGSYIHTGARVGVLIEINCETDF 84          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_GEOSM (Elongation factor Ts OS=Geobacter sp. (strain M21) GN=tsf PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.241e-22
Identity = 66/155 (42.58%), Postives = 98/155 (63.23%), Query Frame = 1
Query:  343 VAVSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNFGG*K*QISRSWVIDLTMQ---AVGLARKWDFLPLEKLSRRSFLI*QTGNFKSTSGGPFFRNLQKLLDGHLLK 795
            ++++AA V +LR+ TGAG+MDCKKAL+ETGGD EKA +YLR KGL+ A KK+GR A EG +GSYI    + GVL+E +CET+F   K +  +++V D+ M    A  L  + + +P E + R   +  +    K+   G     ++K+LDG + K
Sbjct:    1 MSITAAQVNELRKVTGAGLMDCKKALTETGGDHEKAIDYLRTKGLAAASKKAGRAATEGLVGSYIHAGGKIGVLVEVNCETDFVA-KNENFQAFVKDIAMHIAAASPLYVRREEVPAELIEREKAIYRE----KAKESGKPAAIIEKILDGQINK 150          

HSP 2 Score: 82.0333 bits (201), Expect = 4.526e-15
Identity = 38/78 (48.72%), Postives = 56/78 (71.79%), Query Frame = 1
Query:   31 KPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAA 264
            KP  I  KI++G+I K   ++ LLEQ Y+K+    ++ ++ +TIA+IGEN+ ++RF ++ LGEGL KK  DFAAEVAA
Sbjct:  135 KPAAIIEKILDGQINKFFADICLLEQTYVKDPDKTIQTFLNETIASIGENMSIRRFAKFVLGEGLAKKESDFAAEVAA 212          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_GEOBB (Elongation factor Ts OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=tsf PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.241e-22
Identity = 66/155 (42.58%), Postives = 97/155 (62.58%), Query Frame = 1
Query:  343 VAVSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNFGG*K*QISRSWVIDLTMQ---AVGLARKWDFLPLEKLSRRSFLI*QTGNFKSTSGGPFFRNLQKLLDGHLLK 795
            ++++AA V +LR+ TGAG+MDCKKAL+ETGGD EKA +YLR KGL+ A KK+GR A EG +GSYI    + GVL+E +CET+F   K +  + +V D+ M    A  L  + + +P E + R   +  +    K+   G     ++K+LDG + K
Sbjct:    1 MSITAAQVNELRKATGAGLMDCKKALTETGGDHEKAIDYLRTKGLAAASKKAGRAATEGLVGSYIHAGGKIGVLVEVNCETDFVA-KNENFQGFVKDIAMHIAAASPLYVRREEVPAELIEREKAIYRE----KAKESGKPAAIIEKILDGQINK 150          

HSP 2 Score: 82.0333 bits (201), Expect = 4.526e-15
Identity = 38/78 (48.72%), Postives = 56/78 (71.79%), Query Frame = 1
Query:   31 KPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAA 264
            KP  I  KI++G+I K   ++ LLEQ Y+K+    ++ ++ +TIA+IGEN+ ++RF ++ LGEGL KK  DFAAEVAA
Sbjct:  135 KPAAIIEKILDGQINKFFADICLLEQTYVKDPDKTIQTFLNETIASIGENMSIRRFAKFVLGEGLAKKESDFAAEVAA 212          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_ANAD2 (Elongation factor Ts OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=tsf PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.927e-22
Identity = 56/107 (52.34%), Postives = 76/107 (71.03%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNFGG*K*QISRSWVIDLTMQAVGLARKW 666
            +SA +V++LRE+TGAGMMDCKKAL+E GGDL KA+E LRKKGLS A KK+GR A EG + SYI    + GVL+E +CET+F   + +  +  V ++ MQ    + +W
Sbjct:    4 ISAKMVQELREKTGAGMMDCKKALTEAGGDLAKAEEVLRKKGLSAAAKKTGRAATEGAVASYIHMGGKIGVLVEVNCETDFVA-RTEGFQGLVKEIAMQVAAASPRW 109          

HSP 2 Score: 80.1073 bits (196), Expect = 1.720e-14
Identity = 37/77 (48.05%), Postives = 53/77 (68.83%), Query Frame = 1
Query:   31 KPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVA 261
            KPE I  KI  G++ K   E  L+EQ ++K+DK  ++D +   +A IGENI+++RF R+ LGEGLEKK ++ A EVA
Sbjct:  136 KPEAILEKIATGKVEKFYSEFCLMEQAWVKDDKKKIQDVLTDAVAKIGENIQIRRFARFVLGEGLEKKQENLAEEVA 212          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_SYNY3 (Elongation factor Ts OS=Synechocystis sp. (strain PCC 6803) GN=tsf PE=1 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 3.823e-22
Identity = 49/84 (58.33%), Postives = 68/84 (80.95%), Query Frame = 1
Query:   13 KEDLLSKPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAA 264
            ++DL  KP  I+ KIV+GRI KRL+EL+LL+QPYIK+  + +++ VKQ IA +GENI+V+RF+R+NLGEG+EK   +FA EVAA
Sbjct:  131 RDDLGKKPANIKEKIVQGRIDKRLKELSLLDQPYIKDQNLTIEELVKQAIAELGENIQVRRFIRFNLGEGIEKAETNFAEEVAA 214          

HSP 2 Score: 102.834 bits (255), Expect = 2.478e-21
Identity = 52/81 (64.20%), Postives = 65/81 (80.25%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYIP-DSRFGVLIEGHCETNF 588
            ++A LVK+LRE+TGAGMMDCKKAL E  GDLEK+ E+LR+KG++ ADKKSGR A EG + SYI    R GVL+E +CET+F
Sbjct:    4 ITAQLVKELREKTGAGMMDCKKALKENEGDLEKSIEWLRQKGIASADKKSGRTAAEGLVHSYIHFGGRIGVLVEVNCETDF 84          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_PROMT (Elongation factor Ts OS=Prochlorococcus marinus (strain NATL2A) GN=tsf PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.823e-22
Identity = 51/87 (58.62%), Postives = 69/87 (79.31%), Query Frame = 1
Query:   13 KEDLLSKPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAAQTA 273
            ++DL  KP+QI++KIVEGRI KRL+E+ALLEQP+IK+  + V++ VKQ    IGENI+V+RF RY LGEG+E +  DFA EVA+ T+
Sbjct:  131 RDDLSGKPDQIKAKIVEGRIGKRLKEMALLEQPFIKDSSINVEELVKQVAGKIGENIRVRRFTRYILGEGIEVQGPDFAEEVASMTS 217          

HSP 2 Score: 100.523 bits (249), Expect = 1.230e-20
Identity = 53/99 (53.54%), Postives = 76/99 (76.77%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNFGG*K*QISRSWVIDLTMQ 642
            ++A LVK+LR++T AGMMDCKKAL E  GD++K+ E+LR+KG++ A+KKSGR+A EG +GSYI   SR GVL+E +CET+F   +  + +  + DL+MQ
Sbjct:    4 ITAKLVKELRDKTSAGMMDCKKALIENKGDMDKSIEWLRQKGIASAEKKSGRVAAEGAVGSYIHTGSRVGVLLELNCETDFVA-RGDLFQGLLRDLSMQ 101          
The following BLAST results are available for this feature:
BLAST of EY702284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTS_MICAN1.006e-2248.70Elongation factor Ts OS=Microcystis aeruginosa (st... [more]
EFTS_GLOVI1.006e-2258.89Elongation factor Ts OS=Gloeobacter violaceus GN=t... [more]
EFTS_TRIEI1.314e-2255.06Elongation factor Ts OS=Trichodesmium erythraeum (... [more]
EFTS_ANASP1.716e-2258.43Elongation factor Ts OS=Anabaena sp. (strain PCC 7... [more]
EFTS_SYNS92.241e-2257.95Elongation factor Ts OS=Synechococcus sp. (strain ... [more]
EFTS_GEOSM2.241e-2242.58Elongation factor Ts OS=Geobacter sp. (strain M21)... [more]
EFTS_GEOBB2.241e-2242.58Elongation factor Ts OS=Geobacter bemidjiensis (st... [more]
EFTS_ANAD22.927e-2252.34Elongation factor Ts OS=Anaeromyxobacter dehalogen... [more]
EFTS_SYNY33.823e-2258.33Elongation factor Ts OS=Synechocystis sp. (strain ... [more]
EFTS_PROMT3.823e-2258.62Elongation factor Ts OS=Prochlorococcus marinus (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-005-C04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702284 ID=EY702284; Name=EY702284; organism=Citrus sinensis; type=EST; length=846bp
CCACGCGTCCGGAAGGAAGATCTCTTGTCGAAACCAGAGCAGATCAGGTC
AAAGATTGTTGAAGGGCGGATCAGAAAGAGGCTTGAGGAGTTGGCATTGC
TTGAACAACCATACATTAAGAATGATAAGATGGTGGTAAAGGACTGGGTG
AAGCAAACCATTGCAACCATTGGAGAAAACATAAAAGTCAAAAGGTTTGT
GCGGTACAATCTTGGAGAGGGCTTGGAGAAGAAAAGCCAGGATTTTGCTG
CTGAGGTTGCTGCTCAGACTGCTGCAAAACCAATCGCAAAAGAACAGCCT
GCTCCAGCTGAAACAAAGGAAACTGTAGAGAAACCACCAGCAGTTGCAGT
CTCTGCTGCACTTGTTAAACAACTAAGGGAGGAAACAGGAGCAGGAATGA
TGGACTGCAAGAAAGCTCTCTCTGAAACTGGAGGGGATCTTGAGAAGGCA
CAGGAGTACCTCAGGAAAAAGGGTCTCTCTATTGCTGACAAGAAATCAGG
GCGGCTTGCACCGGAGGGGAAAATTGGGTCATATATTCCTGATTCTCGCT
TCGGAGTACTAATTGAAGGCCATTGTGAGACAAACTTTGGGGGGTAAAAA
TGACAAATTTCCAGGAGCTGGGTTATTGATCTAACAATGCAAGCTGTGGG
TTTGGCCCGGAAGTGGGATTTCTTACCCCTTGAAAAACTTTCCCGGAGGA
GCTTCTTAATTTAACAAACAGGAAACTTCAAATCCACAAGCGGGGGGCCC
TTTTTCCGAAACCTCCAAAAACTTTTGGACGGACATCTCTTGAAGGGAGC
GATCCTCCACACGCGTCTGGGGGGGCTTGCTCCTTTCCCACCCCCC
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