EY702284

Overview
NameEY702284
Unique NameEY702284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_DESHD (Elongation factor Ts OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=tsf PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19
Identity = 48/81 (59.26%), Postives = 65/81 (80.25%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNF 588
            V+AA VK+LRE TGAGMMDCKKAL+E GG+++KA ++LR+KGL+ A KK GR+A EG + +YI    R GV++E +CET+F
Sbjct:    4 VTAAQVKELRERTGAGMMDCKKALNEVGGNMDKAIDFLREKGLAAAAKKEGRIAAEGIVEAYIHGGGRIGVMLELNCETDF 84          

HSP 2 Score: 82.8037 bits (203), Expect = 2.654e-15
Identity = 39/76 (51.32%), Postives = 54/76 (71.05%), Query Frame = 1
Query:   31 KPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEV 258
            KPE+I  K+VEGRI K  +E+ LLEQ ++K+    + D V +  A IGE I ++RF RY +GEG+EK+ +DFAAEV
Sbjct:  136 KPEKIVDKMVEGRISKFYKEVCLLEQEFVKDPDKTINDLVLEKTAKIGERIVIRRFTRYEMGEGIEKREEDFAAEV 211          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_CLOK5 (Elongation factor Ts OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=tsf PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19
Identity = 48/81 (59.26%), Postives = 63/81 (77.78%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNF 588
            ++A +VK+LRE TGAGMMDCKKAL+E GGD EKA E LR+KGL+ A KKSGR+A EG + +YI  D +   ++E +CET+F
Sbjct:    2 ITAQMVKELRERTGAGMMDCKKALNEAGGDSEKAIEILREKGLAAAAKKSGRIASEGLVKTYISEDGKVASIVEVNCETDF 82          

HSP 2 Score: 73.559 bits (179), Expect = 1.610e-12
Identity = 34/83 (40.96%), Postives = 52/83 (62.65%), Query Frame = 1
Query:   31 KPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAAQTAAK 279
            KPE+I  KIV GR++K  +E  L+EQ ++K+  + +  ++K     +G  IK+  F+R+  GEG+EKK +DFA EV  Q   K
Sbjct:  224 KPEKIAEKIVIGRVQKYYKENCLIEQLWVKDSDLTIDKYLKSKSKEVGAPIKISNFIRFEKGEGIEKKEEDFAEEVRKQIEGK 306          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_CLOK1 (Elongation factor Ts OS=Clostridium kluyveri (strain NBRC 12016) GN=tsf PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19
Identity = 48/81 (59.26%), Postives = 63/81 (77.78%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNF 588
            ++A +VK+LRE TGAGMMDCKKAL+E GGD EKA E LR+KGL+ A KKSGR+A EG + +YI  D +   ++E +CET+F
Sbjct:    2 ITAQMVKELRERTGAGMMDCKKALNEAGGDSEKAIEILREKGLAAAAKKSGRIASEGLVKTYISEDGKVASIVEVNCETDF 82          

HSP 2 Score: 73.559 bits (179), Expect = 1.610e-12
Identity = 34/83 (40.96%), Postives = 52/83 (62.65%), Query Frame = 1
Query:   31 KPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAAQTAAK 279
            KPE+I  KIV GR++K  +E  L+EQ ++K+  + +  ++K     +G  IK+  F+R+  GEG+EKK +DFA EV  Q   K
Sbjct:  224 KPEKIAEKIVIGRVQKYYKENCLIEQLWVKDSDLTIDKYLKSKSKEVGAPIKISNFIRFEKGEGIEKKEEDFAEEVRKQIEGK 306          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_CARHZ (Elongation factor Ts OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=tsf PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19
Identity = 52/99 (52.53%), Postives = 71/99 (71.72%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNFGG*K*QISRSWVIDLTMQ 642
            +++ +VK+LRE TGAGMMDCK+AL E  GD+EKA E LR+KGL+ A KK+GR+A EG + +YI    R GVL+E +CET+F   K    +S+  D+ MQ
Sbjct:    2 ITSQMVKELRERTGAGMMDCKRALEEANGDMEKAIEILRQKGLAAAAKKAGRIATEGVVEAYIHGGGRIGVLVEINCETDFVA-KTDEFKSFARDIAMQ 99          

HSP 2 Score: 95.9005 bits (237), Expect = 3.029e-19
Identity = 46/78 (58.97%), Postives = 59/78 (75.64%), Query Frame = 1
Query:   31 KPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAA 264
            KP  +  K+VEGR+ K  +E+ LLEQP+IKN  + VKD + + IA IGENI ++RFVR+ LGEGL KK +DFAAEVAA
Sbjct:  134 KPANVVEKMVEGRLEKFFKEVCLLEQPFIKNPDITVKDLLTEKIAKIGENINIRRFVRFELGEGLAKKEEDFAAEVAA 211          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_CALS8 (Elongation factor Ts OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=tsf PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19
Identity = 60/153 (39.22%), Postives = 94/153 (61.44%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNFGG*K*QISRSWVIDLTMQAVGLARKW---DFLPLEKLSRRSFLI*QTGNFKSTSGGPFFRNLQKLLDGHLLK 795
            +SA +VK+LRE TGAGMMDCKKAL +  GD+EKA E LR++GL+ A K++ R+A EG + SYI  + R GVL+E +CET+F   + +  R +  D+ MQ      K+   + +P E + R   ++ Q    ++ + G     + ++++G L K
Sbjct:    2 ISAEMVKELRERTGAGMMDCKKALEDANGDMEKAIELLRERGLAKAAKRASRVAAEGIVESYIHGNGRIGVLVEINCETDFVA-RNEEFRQFAKDIAMQIAAANPKYVSREEIPQEVIEREKAILRQ----QALNEGKPENVVDRIIEGRLEK 149          

HSP 2 Score: 79.337 bits (194), Expect = 2.934e-14
Identity = 36/67 (53.73%), Postives = 49/67 (73.13%), Query Frame = 1
Query:   31 KPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEK 231
            KPE +  +I+EGR+ K  EE+ LLEQP+IKN  M +KD + + IA IGENI ++RF R+  GEG+EK
Sbjct:  134 KPENVVDRIIEGRLEKFFEEVCLLEQPWIKNPDMKIKDLLTEKIAKIGENIVIRRFARFERGEGIEK 200          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_HELMI (Elongation factor Ts OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=tsf PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19
Identity = 48/81 (59.26%), Postives = 64/81 (79.01%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNF 588
            V+AA+VK+LRE TGAGMM+CKKAL+ T GD+EKA  YLR++GL+ A KK+ R+A EG + +YI    R GVL+E +CET+F
Sbjct:    2 VTAAMVKELRERTGAGMMECKKALAHTDGDMEKAVAYLRERGLAAAAKKASRVAAEGLVEAYIHGGGRIGVLVEVNCETDF 82          

HSP 2 Score: 93.9745 bits (232), Expect = 1.151e-18
Identity = 44/79 (55.70%), Postives = 59/79 (74.68%), Query Frame = 1
Query:   31 KPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAAQ 267
            KPE+I  K+VEGRI K  +E+ LLEQP+IKN  + V+  + + +A IGENI V+RFVR+ LGEGL K+  DFA+EV A+
Sbjct:  134 KPEKIVDKMVEGRIEKYFKEICLLEQPFIKNPDVTVQQMITEAVAKIGENINVRRFVRFELGEGLAKRQDDFASEVMAE 212          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_DESMR (Elongation factor Ts OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=tsf PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19
Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 1
Query:  346 AVSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNF 588
            A+SAA VK LR++TGAGMMDCKKAL E  GD EKA  +LR+KGLS A K++GR   EG IGSYI  + + GV++E  CET+F
Sbjct:    3 AISAASVKALRDKTGAGMMDCKKALGECNGDEEKAVAWLREKGLSKAQKRAGRATSEGVIGSYIHSNGKLGVMVEIKCETDF 84          

HSP 2 Score: 73.559 bits (179), Expect = 1.610e-12
Identity = 32/63 (50.79%), Postives = 47/63 (74.60%), Query Frame = 1
Query:   31 KPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGE 219
            KPE I  KIV+GR++K  +E+ LLEQP+IK+DK+ +KD + + +  IGEN+++ RF R  LGE
Sbjct:  136 KPEAIAEKIVDGRVKKLYKEICLLEQPFIKDDKVTIKDLMNELVGVIGENVQIGRFSRMALGE 198          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_BRASO (Elongation factor Ts OS=Bradyrhizobium sp. (strain ORS278) GN=tsf PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19
Identity = 48/80 (60.00%), Postives = 65/80 (81.25%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYIPDSRFGVLIEGHCETNF 588
            ++AA+VK LRE TGAGMMDCK AL+ETGGD++ AQ++LRKKGLS A KK+GR+A EG IG+ +   + GV++E + ET+F
Sbjct:    4 ITAAMVKDLRESTGAGMMDCKAALTETGGDMQAAQDWLRKKGLSKAAKKAGRVAAEGLIGA-LTSGKKGVVVEVNSETDF 82          

HSP 2 Score: 72.4034 bits (176), Expect = 3.587e-12
Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 1
Query:   10 RKEDLLS-------KPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAAQTAAK 279
            R++D+LS       KPE +  KIVE  ++   +E+ LLEQ +I +    V   +K+    +G  IKV  FVRY LGEG+EK+  DFAAEVAA +  K
Sbjct:  211 REKDVLSDKYRQQGKPENVIEKIVESGLKTYYKEVTLLEQAFIHDSGKSVAQALKEAEGKVGGPIKVAGFVRYALGEGIEKEETDFAAEVAAASGKK 307          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_SYNWW (Elongation factor Ts OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=tsf PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.319e-19
Identity = 49/81 (60.49%), Postives = 63/81 (77.78%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNF 588
            ++A +VK+LRE TGAGMMDCK+AL ET GD+EKA + LR KGL+ A KK+GR+A EG + SYI    R GVL+E +CET+F
Sbjct:    2 ITAEMVKELRERTGAGMMDCKRALVETNGDIEKAIDELRTKGLAKAAKKAGRVASEGVVTSYIHGGGRIGVLVEVNCETDF 82          

HSP 2 Score: 83.1889 bits (204), Expect = 2.032e-15
Identity = 39/79 (49.37%), Postives = 58/79 (73.42%), Query Frame = 1
Query:   31 KPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEGLEKKSQDFAAEVAAQ 267
            KPE++  K+VEGR+ K  +E  LLEQ +IK+    V++ + + IA +GENI ++RF RY +GEG+EK+S DFA+EV +Q
Sbjct:  134 KPEKVIEKMVEGRVEKFFKERCLLEQAFIKDLDKSVQELINENIARMGENITIRRFARYEVGEGIEKESCDFASEVMSQ 212          
BLAST of EY702284 vs. ExPASy Swiss-Prot
Match: EFTS_SYNFM (Elongation factor Ts OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=tsf PE=3 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.319e-19
Identity = 49/81 (60.49%), Postives = 63/81 (77.78%), Query Frame = 1
Query:  349 VSAALVKQLREETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSIADKKSGRLAPEGKIGSYI-PDSRFGVLIEGHCETNF 588
            ++AA+VK LRE+T  GMMDCKKAL ETGGDLEKA + LR+KGL+ A K++G+ A EG + +YI    R GVLIE +CET+F
Sbjct:    5 ITAAMVKDLREKTNVGMMDCKKALQETGGDLEKAVDLLRQKGLAKAMKRAGKEASEGMVHAYIHAGGRIGVLIEVNCETDF 85          
The following BLAST results are available for this feature:
BLAST of EY702284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTS_DESHD1.360e-1959.26Elongation factor Ts OS=Desulfitobacterium hafnien... [more]
EFTS_CLOK51.360e-1959.26Elongation factor Ts OS=Clostridium kluyveri (stra... [more]
EFTS_CLOK11.360e-1959.26Elongation factor Ts OS=Clostridium kluyveri (stra... [more]
EFTS_CARHZ1.360e-1952.53Elongation factor Ts OS=Carboxydothermus hydrogeno... [more]
EFTS_CALS81.360e-1939.22Elongation factor Ts OS=Caldicellulosiruptor sacch... [more]
EFTS_HELMI1.776e-1959.26Elongation factor Ts OS=Heliobacterium modesticald... [more]
EFTS_DESMR1.776e-1960.98Elongation factor Ts OS=Desulfovibrio magneticus (... [more]
EFTS_BRASO1.776e-1960.00Elongation factor Ts OS=Bradyrhizobium sp. (strain... [more]
EFTS_SYNWW2.319e-1960.49Elongation factor Ts OS=Syntrophomonas wolfei subs... [more]
EFTS_SYNFM2.319e-1960.49Elongation factor Ts OS=Syntrophobacter fumaroxida... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-005-C04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702284 ID=EY702284; Name=EY702284; organism=Citrus sinensis; type=EST; length=846bp
CCACGCGTCCGGAAGGAAGATCTCTTGTCGAAACCAGAGCAGATCAGGTC
AAAGATTGTTGAAGGGCGGATCAGAAAGAGGCTTGAGGAGTTGGCATTGC
TTGAACAACCATACATTAAGAATGATAAGATGGTGGTAAAGGACTGGGTG
AAGCAAACCATTGCAACCATTGGAGAAAACATAAAAGTCAAAAGGTTTGT
GCGGTACAATCTTGGAGAGGGCTTGGAGAAGAAAAGCCAGGATTTTGCTG
CTGAGGTTGCTGCTCAGACTGCTGCAAAACCAATCGCAAAAGAACAGCCT
GCTCCAGCTGAAACAAAGGAAACTGTAGAGAAACCACCAGCAGTTGCAGT
CTCTGCTGCACTTGTTAAACAACTAAGGGAGGAAACAGGAGCAGGAATGA
TGGACTGCAAGAAAGCTCTCTCTGAAACTGGAGGGGATCTTGAGAAGGCA
CAGGAGTACCTCAGGAAAAAGGGTCTCTCTATTGCTGACAAGAAATCAGG
GCGGCTTGCACCGGAGGGGAAAATTGGGTCATATATTCCTGATTCTCGCT
TCGGAGTACTAATTGAAGGCCATTGTGAGACAAACTTTGGGGGGTAAAAA
TGACAAATTTCCAGGAGCTGGGTTATTGATCTAACAATGCAAGCTGTGGG
TTTGGCCCGGAAGTGGGATTTCTTACCCCTTGAAAAACTTTCCCGGAGGA
GCTTCTTAATTTAACAAACAGGAAACTTCAAATCCACAAGCGGGGGGCCC
TTTTTCCGAAACCTCCAAAAACTTTTGGACGGACATCTCTTGAAGGGAGC
GATCCTCCACACGCGTCTGGGGGGGCTTGCTCCTTTCCCACCCCCC
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