EY702271

Overview
NameEY702271
Unique NameEY702271
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12590 contig Csv1_Contig12590:20..903. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 2.431e-78
Identity = 133/221 (60.18%), Postives = 159/221 (71.95%), Query Frame = 2
Query:  146 GGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQKLANQFLS*RPKSFFPIXXXXXXXXXXXXXXA*NWQFGK 802
            GG WQ+ HATFY              YGNLYSQGYGTNTAALSTALFNNG+SCG+C+E+KC NDP+WC  GS  I++TATNFCPPNLA  +DNGGWCNPP +HFD+A P FL+IAQYRAGIVP+S+RR+PC K+GGIRFT+NGH YFNLVLITNV GAGD+   S+KGS+TGW ++SRNWGQ   +  +       F +                NWQFG+
Sbjct:   28 GGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQ 248          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2)

HSP 1 Score: 260.766 bits (665), Expect = 6.850e-78
Identity = 119/182 (65.38%), Postives = 139/182 (76.37%), Query Frame = 2
Query:  152 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQKLAN 697
            GW SG ATFY              YGNLYS GYGT+TAALSTALFNNG SCG+C+E++C      CL G++ VTATN CPPN AL+ D GGWCNPP  HFDMAEPAF +IAQ RAG+VP+ +RR+ CAK+GGIRFT+ GHSYFNLVL+TNVGGAGDV +VS+KGS++GWQAMS NWG    N
Sbjct:   26 GWSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGS-CLAGTVAVTATNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVKGSRSGWQAMSHNWGANWQN 206          

HSP 2 Score: 52.373 bits (124), Expect = 6.850e-78
Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 3
Query:  681 GKNWQTNSYLNGQSLSFQLTASDGRTVTSNNVVPEIGNLG 800
            G NWQ  + L+GQ LSF++TASDGRTVTS+NV P   + G
Sbjct:  201 GANWQNGANLDGQPLSFRVTASDGRTVTSDNVAPSGWSFG 240          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.742e-76
Identity = 132/221 (59.73%), Postives = 155/221 (70.14%), Query Frame = 2
Query:  146 GGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPG--SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQKLANQFLS*RPKSFFPIXXXXXXXXXXXXXXA*NWQFGK 802
            GG WQ+ HATFY              YGNLYSQGYGTNTAALST+LFN+G SCG+C+E+KC NDPKWC PG  S+ VTATNFCPPNLA  +DNGGWCNPP  HFD+A P FL+IA+YRAGIVPIS+RR+ C K GGIRFT+NGH YFNLVLITNV GAGD+   S+KGSKTGW +++RNWGQ   +  +       F +                NWQFG+
Sbjct:   31 GGSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQ 251          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 3.286e-75
Identity = 133/221 (60.18%), Postives = 153/221 (69.23%), Query Frame = 2
Query:  146 GGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPG--SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQKLANQFLS*RPKSFFPIXXXXXXXXXXXXXXA*NWQFGK 802
            GG W + HATFY              YGNLYSQGYG NTAALSTALFNNGLSCGSC+E+KC NDP WCLPG  SI++TATNFCPPN   ++DNGGWCNPP +HFD+A P FL IA+Y+AGIVP+S+RRIPC KKGGIRFT+NG  YFNLVL+TNV GAGDV  VS+KGS T W  +SRNWGQ   +  L       F +                NWQFG+
Sbjct:   29 GGPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQ 249          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 4.744e-74
Identity = 129/221 (58.37%), Postives = 153/221 (69.23%), Query Frame = 2
Query:  146 GGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPG--SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQKLANQFLS*RPKSFFPIXXXXXXXXXXXXXXA*NWQFGK 802
            GG WQ+ HATFY              YGNLYSQGYG NTAALSTALFNNG SCG+C+E+KC +DP+WC+PG  SI+VTATNFCPPN A  +D+GGWCNPP +HFD+A P FL+I  YRAGIVP+S+RR+PC K GGIRFTVNG  YFNLVL+TNV GAGD++ VS+KGSKT W  MSRNWGQ   +  +       F +                 WQFG+
Sbjct:   33 GGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQ 253          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 8.093e-74
Identity = 131/226 (57.96%), Postives = 155/226 (68.58%), Query Frame = 2
Query:  143 YGGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQ------KLANQFLS*RPKSFFPIXXXXXXXXXXXXXXA*NWQFGK 802
            Y  GW +  ATFY              YGNLYSQGYGTNTAALSTALFN G SCG+C+++KC +DPKWC+ G+I VT TNFCPPN A +N+ GGWCNPP  HFD+A+P FL+IAQY+AG+VP+ +RR+ C +KGGIRFT+NGHSYFNLVLITNV GAGDV SVSIKG+ T WQ+MSRNWGQ      KL  Q LS      F +                NW FG+
Sbjct:   25 YSSGWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALS------FKVTTSDGRTVISNNATPRNWSFGQ 244          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 274.633 bits (701), Expect = 5.246e-73
Identity = 125/221 (56.56%), Postives = 151/221 (68.33%), Query Frame = 2
Query:  146 GGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQKLANQFLS*RPKSFFPIXXXXXXXXXXXXXXA*NWQFGK 802
            GGGW++ HATFY              YGNLYSQGYG NTAALSTALFNNG SCG+C+E+KC +DPKWC  GS  I +TATNFCPPN A  +DNGGWCNPP  HFD+A P FL+IA+YRAGIVP+SFRR+PC K+GGIRFT+NG  YFNLVL+TNV GAG++  + +KG+ T W  MSRNWGQ   +  +       F +                NW+FG+
Sbjct:   28 GGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQ 248          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 7.575e-72
Identity = 135/228 (59.21%), Postives = 161/228 (70.61%), Query Frame = 2
Query:  149 GGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKW-CLPG--SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTG------WQAMSRNWGQK-LANQFLS*RPKSFFPIXXXXXXXXXXXXXXA*NWQFGK 802
            G WQ GHATFY              YGNLYSQGYGT+TAALSTALFN GLSCGSCYE++C  D +  CLPG  ++ VTATNFCPPN AL +D GGWCNPP +HFD+AEPAFL+IA++ AGIVP+SFRR+ CA+KGG+RFTVNGH+YFNLVL+TNVGGAGDV S+++KGS +G      WQ MSRNWGQ   +N +L  +  SF                 A  WQFG+
Sbjct:   26 GQWQPGHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHRRSCLPGGATVTVTATNFCPPNYALPSDGGGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALSFRVTAGDGRSLTCADVAPA-GWQFGQ 252          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 5.213e-69
Identity = 111/178 (62.36%), Postives = 129/178 (72.47%), Query Frame = 2
Query:  155 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEN-DPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWG 682
            W    ATFY              YG+LY  GYGT TAALSTALFN G SCG+C+ + C+    +WC PG SI VTATNFCPPN ALS D GGWCNPP +HFDM++PA+  IA YRAGIVP+++RR+PC + GGIRF VNGHSYF LVL+TNVGG+G V  + IKGS TGW AMSRNWG
Sbjct:   25 WTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGTSITVTATNFCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKGSGTGWMAMSRNWG 202          

HSP 2 Score: 45.4394 bits (106), Expect = 5.213e-69
Identity = 19/34 (55.88%), Postives = 27/34 (79.41%), Query Frame = 3
Query:  681 GKNWQTNSYLNGQSLSFQLTASDGRTVTSNNVVP 782
            G NWQ+N+ L+GQ+LSF++ A DGR VT+ +V P
Sbjct:  202 GANWQSNARLDGQALSFRVQADDGRVVTAADVAP 235          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 8.861e-69
Identity = 108/182 (59.34%), Postives = 131/182 (71.98%), Query Frame = 2
Query:  152 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEN--DPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK--TGWQAMSRNWG 682
            GW  G ATFY              YGNLY+QGYGT TAALSTALF++G SCG CY + C+   DP+WC  G S+ VTATNFCPPN AL +D+GGWCNPP  HFDMA+PA+ +I  YR GIVP++FRR+PC ++GG+RFTV G  YF LVL+TNV  AG V S+ ++GS+   GW AMSRNWG
Sbjct:   33 GWSKGTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRAGASVTVTATNFCPPNYALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVRGSRRGAGWMAMSRNWG 214          

HSP 2 Score: 46.2098 bits (108), Expect = 8.861e-69
Identity = 20/40 (50.00%), Postives = 28/40 (70.00%), Query Frame = 3
Query:  681 GKNWQTNSYLNGQSLSFQLTASDGRTVTSNNVVPEIGNLG 800
            G NWQ+ +YL+GQ LSF++TA+DG+T+    VVP     G
Sbjct:  214 GANWQSLAYLDGQGLSFRVTATDGQTIVFAGVVPPSWRFG 253          
The following BLAST results are available for this feature:
BLAST of EY702271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
EXPA4_ARATH2.431e-7860.18Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 ... [more]
EXP11_ORYSJ6.850e-7865.38Expansin-A11 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP16_ARATH1.742e-7659.73Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=... [more]
EXPA9_ARATH3.286e-7560.18Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 ... [more]
EXPA3_ARATH4.744e-7458.37Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 ... [more]
EXP14_ARATH8.093e-7457.96Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=... [more]
EXPA6_ARATH5.246e-7356.56Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 ... [more]
EXPA6_ORYSJ7.575e-7259.21Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA8_ORYSJ5.213e-6962.36Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP29_ORYSJ8.861e-6959.34Expansin-A29 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-005-A07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702271 ID=EY702271; Name=EY702271; organism=Citrus sinensis; type=EST; length=900bp
CCACGCGTCCGTTTTTCTTTACAAAAAAACACATAAACATAAGCAGCCAG
CAGTAGCAGCCATGACCAATATTGCAGCATCATCTAGTGTTGCTCTCCTT
TTGTTTGTGCTCAATTTTTGCTTTCGTGGCACATTTGGAGACTATGGTGG
TGGGTGGCAAAGTGGCCATGCAACTTTCTATGGCGGGGGTGATGCTTCCG
GCACAATGGGTGGTGCTTGTGGGTATGGCAATTTGTACAGCCAAGGCTAT
GGGACTAACACTGCAGCACTCAGTACCGCTCTATTCAACAATGGCCTAAG
CTGTGGTTCATGCTATGAAATGAAATGTGAAAATGACCCCAAGTGGTGCC
TCCCCGGCTCCATCATTGTCACCGCCACCAACTTCTGCCCACCTAACCTT
GCCCTGTCTAACGACAACGGCGGTTGGTGCAATCCTCCCCTCCAGCACTT
TGACATGGCTGAGCCCGCTTTCTTGCAAATTGCCCAATACCGCGCCGGTA
TCGTCCCAATTTCCTTCAGAAGGATCCCGTGTGCGAAGAAAGGAGGAATA
AGGTTTACCGTCAATGGACACTCATACTTCAACCTGGTTTTGATCACAAA
TGTCGGAGGAGCAGGAGATGTACATTCAGTATCAATCAAGGGTTCAAAGA
CTGGATGGCAAGCAATGTCAAGGAACTGGGGGCAAAAATTGGCAAACCAA
TTCTTATCTTAACGGCCAAAGTCTTTCTTTCCAATTGACAGCCAGTGACG
GCAGGACTGTGACTAGCAACAATGTTGTGCCTGAAATTGGCAATTTGGGA
AACCTTTGAAGGTGGTAGTTTTAGAATTTAAAAAAGGGATCACAATTTGG
ATATTAATTGAATTTGGACTGTTTTGGAGGGAAGAAGGGGGAAAAAGGGT
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