EY702271

Overview
NameEY702271
Unique NameEY702271
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12590 contig Csv1_Contig12590:20..903. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 7.592e-64
Identity = 114/196 (58.16%), Postives = 139/196 (70.92%), Query Frame = 2
Query:  152 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEN--DPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQK-LANQFLS*RPKSF 727
            GW    ATFY              YG+LYS GYGTNTAALST LFN+G SCG CY + C+   D ++C+ G S+ +TATN CPPN AL ND GGWCNPP QHFDMAEPA+L+I  Y  GIVP+ ++R+PCAK+GG+RFT+NG  YF LVL++NVGG G + SVSIKGS+TGW AMSRNWG    +N +L  +  SF
Sbjct:   33 GWNKAFATFYGGSDASGTMGGACGYGDLYSTGYGTNTAALSTVLFNDGASCGQCYRIMCDYQADRRFCISGTSVTITATNLCPPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIKGSRTGWMAMSRNWGVNWQSNAYLDGQSLSF 228          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 8.028e-64
Identity = 96/177 (54.24%), Postives = 124/177 (70.06%), Query Frame = 2
Query:  155 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQ 685
            W    ATFY              YG+L+ QGYG  TAALSTALFN G +CG+CY++ C NDP+WCLPGS+ +TATNFCPP+   S   G WCNPP +HFD++ P FL+IAQY+AG+VP+ +RRI CA+ GG++F   G+ YF ++L  NVGGAGD+  + +KG KTGW  M +NWGQ
Sbjct:   48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFCPPDY--SKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQ 222          

HSP 2 Score: 41.9726 bits (97), Expect = 8.028e-64
Identity = 20/44 (45.45%), Postives = 25/44 (56.82%), Query Frame = 3
Query:  669 QGTGGKNWQTNSYLNGQSLSFQLTASDGRTVTSNNVVPEIGNLG 800
            Q   G+NW T   L GQ +SF++T SDG T   NNV+P     G
Sbjct:  217 QKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFG 260          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 1.363e-63
Identity = 104/191 (54.45%), Postives = 135/191 (70.68%), Query Frame = 2
Query:  128 GTFGDYGG-----GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQ 685
            G    +GG     GW  G ATFY              YG+L+ QGYG  TAALSTALFNNG  CG+CYE+ CE+ P+WCLPGSI +TATNFCPP+    NDN  WCNPP +HFD+++P FL+IA+Y+AG+VP+ FRR+PCAK GG++F + G+ +F ++L  NVGGAG V ++ IKG++T W AM +NWGQ
Sbjct:   76 GALPSHGGQVPHSGWGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPGSIKITATNFCPPDFTKPNDN--WCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQWIAMKKNWGQ 264          

HSP 2 Score: 31.9574 bits (71), Expect = 1.363e-63
Identity = 14/24 (58.33%), Postives = 16/24 (66.67%), Query Frame = 3
Query:  681 GKNWQTNSYLNGQSLSFQLTASDG 752
            G+ W T   L GQ LSF+LT SDG
Sbjct:  263 GQIWSTGVVLTGQCLSFRLTTSDG 286          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 3.026e-63
Identity = 98/177 (55.37%), Postives = 126/177 (71.19%), Query Frame = 2
Query:  155 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQ 685
            W    ATFY              YGNL+ QGYG  TAALSTALFN+G +CG+CYE+ C  DP+WCLPGS+ +TATNFCP N + + D   WCNPP +HFD++   FL+IA+Y+AG+VP+ +RRIPC+K GG++F   G+ YF +VLI NVGGAGD+  V +KG+KTGW  M +NWGQ
Sbjct:   52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQ 226          

HSP 2 Score: 39.2762 bits (90), Expect = 3.026e-63
Identity = 19/40 (47.50%), Postives = 25/40 (62.50%), Query Frame = 3
Query:  681 GKNWQTNSYLNGQSLSFQLTASDGRTVTSNNVVPEIGNLG 800
            G+NW T + L GQ LSF++T SDG T    NV+P+    G
Sbjct:  225 GQNWTTITVLTGQGLSFRVTTSDGITKDFWNVMPKNWGFG 264          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 5.144e-63
Identity = 95/177 (53.67%), Postives = 124/177 (70.06%), Query Frame = 2
Query:  155 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQ 685
            W    ATFY              YG+L+ QGYG  TAALSTALFN G +CG+CY++ C +DP+WCLPG+I +TATNFCPP+   S   G WCNPP +HFD++ P FL+IAQY+AG+VP+ +RRI CA+ GG++F   G+ YF ++L  NVGGAGD+  + +KG KTGW  M +NWGQ
Sbjct:   55 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPGTIKITATNFCPPDY--SKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQ 229          

HSP 2 Score: 41.9726 bits (97), Expect = 5.144e-63
Identity = 20/44 (45.45%), Postives = 25/44 (56.82%), Query Frame = 3
Query:  669 QGTGGKNWQTNSYLNGQSLSFQLTASDGRTVTSNNVVPEIGNLG 800
            Q   G+NW T   L GQ +SF++T SDG T   NNV+P     G
Sbjct:  224 QKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFG 267          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 6.713e-63
Identity = 98/180 (54.44%), Postives = 129/180 (71.67%), Query Frame = 2
Query:  152 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEN--DPKWCLPGSII-VTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWG 682
            GW  G ATFY              YGNLY+ GYGTNTAALS+ LFN+G SCG CY + C+    P+WC  G+ + +TATN CPPN AL +++GGWCNPP  HFDMAEPA+LQI  Y+AGI+P+ ++++ C ++GGIRFT+ G ++F LVL++NV G+G V SVS+KG  TGW  ++RNWG
Sbjct:   26 GWNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAGAAVTITATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNWG 205          

HSP 2 Score: 41.5874 bits (96), Expect = 6.713e-63
Identity = 20/40 (50.00%), Postives = 27/40 (67.50%), Query Frame = 3
Query:  681 GKNWQTNSYLNGQSLSFQLTASDGRTVTSNNVVPEIGNLG 800
            G NWQ NS L GQ+LSF +T++ G+T+   NVVP   + G
Sbjct:  205 GANWQCNSGLVGQALSFAVTSTGGQTLYIYNVVPSWWSFG 244          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.432e-62
Identity = 116/217 (53.46%), Postives = 148/217 (68.20%), Query Frame = 2
Query:  161 SGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE-NDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQK-LANQFLS*RPKSFFPIXXXXXXXXXXXXXXA*NWQFGK 802
            SG ATFY              YGNLYS GYGTNTAALS+ALFN+G +CG CY++ C+ ++ KWC  G S+ +TATN CPP+ +  +++GGWCNPP QHFDMA+PA+ QI  YR GIVP++F+R+ C +KGG+RFT+NG+SYF LVLITNVGG G + SV IKG+KTGW  MSRNWG    AN +L+ +  S F +                NWQFG+
Sbjct:   26 SGTATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQITCDQSNSKWCKAGTSVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGWVTMSRNWGANWQANNYLNNQAIS-FSVTSTAGKTLVFEDVAPSNWQFGQ 241          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.870e-62
Identity = 117/225 (52.00%), Postives = 149/225 (66.22%), Query Frame = 2
Query:  152 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTG-WQAMSRNWGQKL-ANQFLS*RPKSFFPIXXXXXXXXXXXXXXA*NWQFGKPLK 811
            GW   HATFY              YGNLY+ GY TNTAALSTALFN+G SCG CY++ C+    P+WCL G SI +TATNFCPPN A ++DNGGWCNPP  HFDMA+PAFL IA+Y+AGIVPI ++++ C + GG+RFT+NG +YF LVLI+NV G G++  V IKGSK+  W+ MSRNWG    +N +L+ +  S F +                NW+FG+  K
Sbjct:   27 GWLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAALSTALFNDGKSCGGCYQILCDATKVPQWCLKGKSITITATNFCPPNFAQASDNGGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGEISKVWIKGSKSNKWETMSRNWGANYQSNTYLNGQSLS-FKVQLSDGSIKAALNVVPSNWRFGQSFK 250          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 1.939e-62
Identity = 97/177 (54.80%), Postives = 125/177 (70.62%), Query Frame = 2
Query:  155 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQ 685
            W    ATFY              YGNL+ QGYG  TAALSTALFN+G +CG+CYE+ C  DP+WCLPGS+ +TATNFCP N + + D   WCNPP +HFD++   FL+IA+Y+AG+VP+ +RRIPC+K GG++F   G+ YF +VLI NVGGAGD+  V +K +KTGW  M +NWGQ
Sbjct:   58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITMKKNWGQ 232          

HSP 2 Score: 39.6614 bits (91), Expect = 1.939e-62
Identity = 18/40 (45.00%), Postives = 26/40 (65.00%), Query Frame = 3
Query:  681 GKNWQTNSYLNGQSLSFQLTASDGRTVTSNNVVPEIGNLG 800
            G+NW T++ L GQ LSF++T +DG T    NV+P+    G
Sbjct:  231 GQNWTTSTVLTGQGLSFRVTTTDGITKDFWNVMPKNWGFG 270          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 2.755e-61
Identity = 100/183 (54.64%), Postives = 127/183 (69.40%), Query Frame = 2
Query:  149 GGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQK 688
            G W+  HATFY              Y +   +GYG  T A+ST LF  G  CG+CYE+KC + P  C  G+  ++VTATN CPPN   SNDNGGWCNPP +HFD++ PAFLQIAQ +AGIVPIS+RR+PC K GGIR+T+ G+ YFNLV+++NVGGAGDV  +S+KG+K   W  + RNWGQ+
Sbjct:   40 GPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQE 222          

HSP 2 Score: 36.1946 bits (82), Expect = 2.755e-61
Identity = 15/34 (44.12%), Postives = 23/34 (67.65%), Query Frame = 3
Query:  681 GKNWQTNSYLNGQSLSFQLTASDGRTVTSNNVVP 782
            G+ WQT+  L G+SL+F++   D R  TS +V+P
Sbjct:  220 GQEWQTSEVLTGESLTFRVMTGDHRKATSWHVLP 253          
The following BLAST results are available for this feature:
BLAST of EY702271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
EXPA1_ORYSJ7.592e-6458.16Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP23_ARATH8.028e-6454.24Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=... [more]
EXP24_ARATH1.363e-6354.45Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=... [more]
EXP22_ARATH3.026e-6355.37Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=... [more]
EXP25_ARATH5.144e-6353.67Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=... [more]
EXP25_ORYSJ6.713e-6354.44Expansin-A25 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP12_ORYSJ1.432e-6253.46Expansin-A12 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP17_ARATH1.870e-6252.00Putative expansin-A17 OS=Arabidopsis thaliana GN=E... [more]
EXP26_ARATH1.939e-6254.80Putative expansin-A26 OS=Arabidopsis thaliana GN=E... [more]
EXP32_ORYSJ2.755e-6154.64Expansin-A32 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-005-A07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702271 ID=EY702271; Name=EY702271; organism=Citrus sinensis; type=EST; length=900bp
CCACGCGTCCGTTTTTCTTTACAAAAAAACACATAAACATAAGCAGCCAG
CAGTAGCAGCCATGACCAATATTGCAGCATCATCTAGTGTTGCTCTCCTT
TTGTTTGTGCTCAATTTTTGCTTTCGTGGCACATTTGGAGACTATGGTGG
TGGGTGGCAAAGTGGCCATGCAACTTTCTATGGCGGGGGTGATGCTTCCG
GCACAATGGGTGGTGCTTGTGGGTATGGCAATTTGTACAGCCAAGGCTAT
GGGACTAACACTGCAGCACTCAGTACCGCTCTATTCAACAATGGCCTAAG
CTGTGGTTCATGCTATGAAATGAAATGTGAAAATGACCCCAAGTGGTGCC
TCCCCGGCTCCATCATTGTCACCGCCACCAACTTCTGCCCACCTAACCTT
GCCCTGTCTAACGACAACGGCGGTTGGTGCAATCCTCCCCTCCAGCACTT
TGACATGGCTGAGCCCGCTTTCTTGCAAATTGCCCAATACCGCGCCGGTA
TCGTCCCAATTTCCTTCAGAAGGATCCCGTGTGCGAAGAAAGGAGGAATA
AGGTTTACCGTCAATGGACACTCATACTTCAACCTGGTTTTGATCACAAA
TGTCGGAGGAGCAGGAGATGTACATTCAGTATCAATCAAGGGTTCAAAGA
CTGGATGGCAAGCAATGTCAAGGAACTGGGGGCAAAAATTGGCAAACCAA
TTCTTATCTTAACGGCCAAAGTCTTTCTTTCCAATTGACAGCCAGTGACG
GCAGGACTGTGACTAGCAACAATGTTGTGCCTGAAATTGGCAATTTGGGA
AACCTTTGAAGGTGGTAGTTTTAGAATTTAAAAAAGGGATCACAATTTGG
ATATTAATTGAATTTGGACTGTTTTGGAGGGAAGAAGGGGGAAAAAGGGT
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