EY702271

Overview
NameEY702271
Unique NameEY702271
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12590 contig Csv1_Contig12590:20..903. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 5.630e-59
Identity = 107/194 (55.15%), Postives = 137/194 (70.62%), Query Frame = 2
Query:  158 QSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE-NDPKWCLPG--SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQK-LANQFLS*RPKSF 727
            QS  ATFY              YGNLY+ GYG   AALS+ALFN+G  CG+CY + C+ +  KWC PG  SI +TATN CPPN AL +++GGWCNPP QHFDM++PA+  IA Y+AGIVP++++R+PC + GGIRF ++GH YF LV +TNVGG+G V  +SIKGS TGW AMSRNWG    +N +L+ +  SF
Sbjct:   29 QSAFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQSNAYLAGQSLSF 222          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 5.630e-59
Identity = 108/194 (55.67%), Postives = 133/194 (68.56%), Query Frame = 2
Query:  155 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPK-WCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQK-LANQFLS*RPKSF 727
            W    ATFY              YGNLY+ GYG N AALS+ALFN+G  CG+CY + C+     WC PG SI +TATN CPPN A  +D GGWCNPP +HFDM++PA+  IA Y+AGIVP++F+R+PC K GGIRFT++G  YF LV + NVGG+G V  VSIKGSKT W AMSRNWGQ   +N +L+ +  SF
Sbjct:   23 WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGTSITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIKGSKTDWMAMSRNWGQNWQSNAYLNTQSLSF 216          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 1.459e-56
Identity = 93/178 (52.25%), Postives = 120/178 (67.42%), Query Frame = 2
Query:  155 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQ 685
            W+S  A++Y              +G+L   GYG  T  LSTALF  G +CG CYE+KC +D K+CLPG SI+VTATNFC PN  L  D GG CNPP  HF +   +F +IA ++AG++PI +RR+ C + GG+RF V G S+F  VLI+NVGGAGDV SV IKG+++GW +M RNWGQ
Sbjct:   33 WRSAKASYYAADPEDAIGGACG-FGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGTSIVVTATNFCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQ 209          

HSP 2 Score: 46.9802 bits (110), Expect = 1.459e-56
Identity = 25/56 (44.64%), Postives = 32/56 (57.14%), Query Frame = 3
Query:  681 GKNWQTNSYLNGQSLSFQLTASDGRTVTSNNVVPEIGNLGNL*RW*F*NLKKGSQF 848
            G+ W  NS   GQ LSF+LT+SDG+T+T+ NVVP+         W F     G QF
Sbjct:  208 GQIWHINSDFRGQPLSFELTSSDGKTLTNYNVVPK--------EWDFGKTYTGKQF 255          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 9.939e-56
Identity = 105/197 (53.30%), Postives = 133/197 (67.51%), Query Frame = 2
Query:  155 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDP--KWCLP-GSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWG---QKLANQFLS*RPKSF 727
            W    ATFY              YGNLY QGYG   AALSTALFN+G +CG CY + C+ D   +WC P G++ VTATN CPPN AL +D GGWCNPP +HFDM++PA+ +I  YRAGIVP+ +RR+ C ++GG+RFTV G  +F LVL+ NV G+G V +VS++G+ TGW  MSRNWG   Q LA   L+ +P SF
Sbjct:   27 WIPATATFYGGNDGSGTMGGACGYGNLYDQGYGLENAALSTALFNDGAACGQCYLIVCDTDKAGRWCKPRGAVTVTATNLCPPNWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQMSRNWGANWQSLAG--LAGQPLSF 221          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 5.976e-55
Identity = 92/181 (50.83%), Postives = 123/181 (67.96%), Query Frame = 2
Query:  146 GGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWG 682
            G  W++  ATFY              YGN+Y  GYG  T ALSTALFN G +CG C+++KC + P  C  GS   +VTATN CPPN   +++NGGWCNPP  HFD+ +PAF++IA ++AGI+P+S+RR+ C K GGIRF   G+ Y+ LV + NVGG GD+ ++++KGS+TGW  MS NWG
Sbjct:   28 GTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWG 207          

HSP 2 Score: 28.1054 bits (61), Expect = 5.976e-55
Identity = 17/41 (41.46%), Postives = 24/41 (58.54%), Query Frame = 3
Query:  681 GKNWQTNSYLNGQSLSFQLTASDGR-TVTSNNVVPEIGNLG 800
            G ++Q  S L GQSLSF+LT+   R T+ + N  P   + G
Sbjct:  207 GASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASWSAG 247          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.099e-54
Identity = 96/199 (48.24%), Postives = 130/199 (65.33%), Query Frame = 2
Query:  149 GGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWG------QKLANQFLS*RPKSF 727
            G W+  HATFY              YGNL++ GYG +TAALST LFN+G  CG C+++ C   P      S +VTATN CPPN    ++ GGWCNPP  HFDMA+PAF+++A +RAGI+P+++RR+PC + GG+RF   G+SY+ L+ + NVGGAGD+ S+++KGS+T W +MS NWG        L  Q LS R  S+
Sbjct:   35 GPWRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSY 233          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 1.099e-54
Identity = 105/194 (54.12%), Postives = 127/194 (65.46%), Query Frame = 2
Query:  155 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPGSII-VTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQK------LANQFLS 709
            W    ATFY              YGNLY QGYG + AALS ALFN+G SCG CY + C+    P+WC  G+ + VTATN CPPN AL +D GGWCNPP  HFDM++PA+ QI  Y+AGIVP+ ++R+ C ++GG+RFTV G +YF LVLITNV G+G V S  IKG+ TGW  MSRNWG        LA Q LS
Sbjct:   28 WSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGTAVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALS 221          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 4.176e-54
Identity = 105/224 (46.88%), Postives = 139/224 (62.05%), Query Frame = 2
Query:  137 GDYGGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE-NDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQK-LANQFLS*RPKSFFPIXXXXXXXXXXXXXXA*NWQFG 799
            G+    W S  ATFY              YGN+YS GYGTNT ALS+AL+ +G SCG+CY + C+ +  +WC  G S+ VTATN+CPPN + S D GGWCNPP +HFDM++PA+  IA Y +GIVP+ + R PC + GGIRF + GH Y+ LVL+TNV G+G V +  +KGS T W +MSRNWG+   +N +L+ +  S F +                NWQFG
Sbjct:   21 GEAAQQWTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGTSVTVTATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALS-FRVQADDGGVVTAYDVAPANWQFG 243          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 1.565e-52
Identity = 95/196 (48.47%), Postives = 124/196 (63.27%), Query Frame = 2
Query:  110 LNFCFRGTFGDYGGGWQSGHATFYXXXXXXXXXXXXXX--YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQ 685
            L+ C R   G Y   W+ G AT+                 YG+L    YG  TA +S ALF  G +CG CYE++C N   WCL GS  ++VTAT+FC PNL LS+D GGWCN P +HF+M+E AFL++A+ +A IVP+ FRR+ C + GG+RFT+ G + F  VLITNV   G+V +V +KGS+TGW  M RNWGQ
Sbjct:   18 LSGCIRLGNGGYEE-WRMGSATYIKESLGHPLNDGGGACGYGDLDIFRYGRYTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQ 212          

HSP 2 Score: 40.4318 bits (93), Expect = 1.565e-52
Identity = 22/56 (39.29%), Postives = 30/56 (53.57%), Query Frame = 3
Query:  681 GKNWQTNSYLNGQSLSFQLTASDGRTVTSNNVVPEIGNLGNL*RW*F*NLKKGSQF 848
            G+NWQ ++ L GQ LSF++T   GRTV + +V P          W F    +G QF
Sbjct:  211 GQNWQCDADLRGQPLSFEVTGGRGRTVVAYSVAPP--------DWMFAQTFEGKQF 258          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 2.041e-52
Identity = 91/187 (48.66%), Postives = 120/187 (64.17%), Query Frame = 2
Query:  137 GDYGGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE--NDPKWCLPGSII-VTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQY-RAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWG 682
            G    GW   HAT+Y              Y N Y  G+G +TAALS  LF +G SCG CY+++C+   DPKWCL G+ + VTATNFCP     +N+N GWCN P  HFDM+ PAF +IA+    GIVP+ +RR+ C ++GG+RFT+ G   FN+V+I+NVGG G V SV+++GSK   W  M+RNWG
Sbjct:   21 GMCSNGWIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTATNFCP-----TNNNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWG 202          

HSP 2 Score: 40.4318 bits (93), Expect = 2.041e-52
Identity = 18/34 (52.94%), Postives = 24/34 (70.59%), Query Frame = 3
Query:  681 GKNWQTNSYLNGQSLSFQLTASDGRTVTSNNVVP 782
            G NWQ++  L GQ LSF++T +D +T T  NVVP
Sbjct:  202 GANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVP 235          
The following BLAST results are available for this feature:
BLAST of EY702271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
EXPA3_ORYSJ5.630e-5955.15Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP33_ORYSJ5.630e-5955.67Expansin-A33 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP10_ORYSJ1.459e-5652.25Expansin-A10 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP27_ORYSJ9.939e-5653.30Putative expansin-A27 OS=Oryza sativa subsp. japon... [more]
EXP18_ARATH5.976e-5550.83Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=... [more]
EXPA7_ARATH1.099e-5448.24Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 ... [more]
EXP31_ORYSJ1.099e-5454.12Expansin-A31 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA9_ORYSJ4.176e-5446.88Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP16_ORYSJ1.565e-5248.47Expansin-A16 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP12_ARATH2.041e-5248.66Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-005-A07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702271 ID=EY702271; Name=EY702271; organism=Citrus sinensis; type=EST; length=900bp
CCACGCGTCCGTTTTTCTTTACAAAAAAACACATAAACATAAGCAGCCAG
CAGTAGCAGCCATGACCAATATTGCAGCATCATCTAGTGTTGCTCTCCTT
TTGTTTGTGCTCAATTTTTGCTTTCGTGGCACATTTGGAGACTATGGTGG
TGGGTGGCAAAGTGGCCATGCAACTTTCTATGGCGGGGGTGATGCTTCCG
GCACAATGGGTGGTGCTTGTGGGTATGGCAATTTGTACAGCCAAGGCTAT
GGGACTAACACTGCAGCACTCAGTACCGCTCTATTCAACAATGGCCTAAG
CTGTGGTTCATGCTATGAAATGAAATGTGAAAATGACCCCAAGTGGTGCC
TCCCCGGCTCCATCATTGTCACCGCCACCAACTTCTGCCCACCTAACCTT
GCCCTGTCTAACGACAACGGCGGTTGGTGCAATCCTCCCCTCCAGCACTT
TGACATGGCTGAGCCCGCTTTCTTGCAAATTGCCCAATACCGCGCCGGTA
TCGTCCCAATTTCCTTCAGAAGGATCCCGTGTGCGAAGAAAGGAGGAATA
AGGTTTACCGTCAATGGACACTCATACTTCAACCTGGTTTTGATCACAAA
TGTCGGAGGAGCAGGAGATGTACATTCAGTATCAATCAAGGGTTCAAAGA
CTGGATGGCAAGCAATGTCAAGGAACTGGGGGCAAAAATTGGCAAACCAA
TTCTTATCTTAACGGCCAAAGTCTTTCTTTCCAATTGACAGCCAGTGACG
GCAGGACTGTGACTAGCAACAATGTTGTGCCTGAAATTGGCAATTTGGGA
AACCTTTGAAGGTGGTAGTTTTAGAATTTAAAAAAGGGATCACAATTTGG
ATATTAATTGAATTTGGACTGTTTTGGAGGGAAGAAGGGGGAAAAAGGGT
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