EY702271
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 228.024 bits (580), Expect = 5.630e-59 Identity = 107/194 (55.15%), Postives = 137/194 (70.62%), Query Frame = 2 Query: 158 QSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE-NDPKWCLPG--SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQK-LANQFLS*RPKSF 727 QS ATFY YGNLY+ GYG AALS+ALFN+G CG+CY + C+ + KWC PG SI +TATN CPPN AL +++GGWCNPP QHFDM++PA+ IA Y+AGIVP++++R+PC + GGIRF ++GH YF LV +TNVGG+G V +SIKGS TGW AMSRNWG +N +L+ + SF Sbjct: 29 QSAFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQSNAYLAGQSLSF 222
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 5.630e-59 Identity = 108/194 (55.67%), Postives = 133/194 (68.56%), Query Frame = 2 Query: 155 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPK-WCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQK-LANQFLS*RPKSF 727 W ATFY YGNLY+ GYG N AALS+ALFN+G CG+CY + C+ WC PG SI +TATN CPPN A +D GGWCNPP +HFDM++PA+ IA Y+AGIVP++F+R+PC K GGIRFT++G YF LV + NVGG+G V VSIKGSKT W AMSRNWGQ +N +L+ + SF Sbjct: 23 WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGTSITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIKGSKTDWMAMSRNWGQNWQSNAYLNTQSLSF 216
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 194.897 bits (494), Expect = 1.459e-56 Identity = 93/178 (52.25%), Postives = 120/178 (67.42%), Query Frame = 2 Query: 155 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQ 685 W+S A++Y +G+L GYG T LSTALF G +CG CYE+KC +D K+CLPG SI+VTATNFC PN L D GG CNPP HF + +F +IA ++AG++PI +RR+ C + GG+RF V G S+F VLI+NVGGAGDV SV IKG+++GW +M RNWGQ Sbjct: 33 WRSAKASYYAADPEDAIGGACG-FGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGTSIVVTATNFCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQ 209 HSP 2 Score: 46.9802 bits (110), Expect = 1.459e-56 Identity = 25/56 (44.64%), Postives = 32/56 (57.14%), Query Frame = 3 Query: 681 GKNWQTNSYLNGQSLSFQLTASDGRTVTSNNVVPEIGNLGNL*RW*F*NLKKGSQF 848 G+ W NS GQ LSF+LT+SDG+T+T+ NVVP+ W F G QF Sbjct: 208 GQIWHINSDFRGQPLSFELTSSDGKTLTNYNVVPK--------EWDFGKTYTGKQF 255
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 217.238 bits (552), Expect = 9.939e-56 Identity = 105/197 (53.30%), Postives = 133/197 (67.51%), Query Frame = 2 Query: 155 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDP--KWCLP-GSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWG---QKLANQFLS*RPKSF 727 W ATFY YGNLY QGYG AALSTALFN+G +CG CY + C+ D +WC P G++ VTATN CPPN AL +D GGWCNPP +HFDM++PA+ +I YRAGIVP+ +RR+ C ++GG+RFTV G +F LVL+ NV G+G V +VS++G+ TGW MSRNWG Q LA L+ +P SF Sbjct: 27 WIPATATFYGGNDGSGTMGGACGYGNLYDQGYGLENAALSTALFNDGAACGQCYLIVCDTDKAGRWCKPRGAVTVTATNLCPPNWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQMSRNWGANWQSLAG--LAGQPLSF 221
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 5.976e-55 Identity = 92/181 (50.83%), Postives = 123/181 (67.96%), Query Frame = 2 Query: 146 GGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWG 682 G W++ ATFY YGN+Y GYG T ALSTALFN G +CG C+++KC + P C GS +VTATN CPPN +++NGGWCNPP HFD+ +PAF++IA ++AGI+P+S+RR+ C K GGIRF G+ Y+ LV + NVGG GD+ ++++KGS+TGW MS NWG Sbjct: 28 GTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWG 207 HSP 2 Score: 28.1054 bits (61), Expect = 5.976e-55 Identity = 17/41 (41.46%), Postives = 24/41 (58.54%), Query Frame = 3 Query: 681 GKNWQTNSYLNGQSLSFQLTASDGR-TVTSNNVVPEIGNLG 800 G ++Q S L GQSLSF+LT+ R T+ + N P + G Sbjct: 207 GASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASWSAG 247
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 1.099e-54 Identity = 96/199 (48.24%), Postives = 130/199 (65.33%), Query Frame = 2 Query: 149 GGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWG------QKLANQFLS*RPKSF 727 G W+ HATFY YGNL++ GYG +TAALST LFN+G CG C+++ C P S +VTATN CPPN ++ GGWCNPP HFDMA+PAF+++A +RAGI+P+++RR+PC + GG+RF G+SY+ L+ + NVGGAGD+ S+++KGS+T W +MS NWG L Q LS R S+ Sbjct: 35 GPWRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSY 233
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 213.772 bits (543), Expect = 1.099e-54 Identity = 105/194 (54.12%), Postives = 127/194 (65.46%), Query Frame = 2 Query: 155 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPGSII-VTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQK------LANQFLS 709 W ATFY YGNLY QGYG + AALS ALFN+G SCG CY + C+ P+WC G+ + VTATN CPPN AL +D GGWCNPP HFDM++PA+ QI Y+AGIVP+ ++R+ C ++GG+RFTV G +YF LVLITNV G+G V S IKG+ TGW MSRNWG LA Q LS Sbjct: 28 WSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGTAVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALS 221
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 211.846 bits (538), Expect = 4.176e-54 Identity = 105/224 (46.88%), Postives = 139/224 (62.05%), Query Frame = 2 Query: 137 GDYGGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE-NDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQK-LANQFLS*RPKSFFPIXXXXXXXXXXXXXXA*NWQFG 799 G+ W S ATFY YGN+YS GYGTNT ALS+AL+ +G SCG+CY + C+ + +WC G S+ VTATN+CPPN + S D GGWCNPP +HFDM++PA+ IA Y +GIVP+ + R PC + GGIRF + GH Y+ LVL+TNV G+G V + +KGS T W +MSRNWG+ +N +L+ + S F + NWQFG Sbjct: 21 GEAAQQWTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGTSVTVTATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALS-FRVQADDGGVVTAYDVAPANWQFG 243
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 1.565e-52 Identity = 95/196 (48.47%), Postives = 124/196 (63.27%), Query Frame = 2 Query: 110 LNFCFRGTFGDYGGGWQSGHATFYXXXXXXXXXXXXXX--YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQ 685 L+ C R G Y W+ G AT+ YG+L YG TA +S ALF G +CG CYE++C N WCL GS ++VTAT+FC PNL LS+D GGWCN P +HF+M+E AFL++A+ +A IVP+ FRR+ C + GG+RFT+ G + F VLITNV G+V +V +KGS+TGW M RNWGQ Sbjct: 18 LSGCIRLGNGGYEE-WRMGSATYIKESLGHPLNDGGGACGYGDLDIFRYGRYTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQ 212 HSP 2 Score: 40.4318 bits (93), Expect = 1.565e-52 Identity = 22/56 (39.29%), Postives = 30/56 (53.57%), Query Frame = 3 Query: 681 GKNWQTNSYLNGQSLSFQLTASDGRTVTSNNVVPEIGNLGNL*RW*F*NLKKGSQF 848 G+NWQ ++ L GQ LSF++T GRTV + +V P W F +G QF Sbjct: 211 GQNWQCDADLRGQPLSFEVTGGRGRTVVAYSVAPP--------DWMFAQTFEGKQF 258
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 2.041e-52 Identity = 91/187 (48.66%), Postives = 120/187 (64.17%), Query Frame = 2 Query: 137 GDYGGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE--NDPKWCLPGSII-VTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQY-RAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWG 682 G GW HAT+Y Y N Y G+G +TAALS LF +G SCG CY+++C+ DPKWCL G+ + VTATNFCP +N+N GWCN P HFDM+ PAF +IA+ GIVP+ +RR+ C ++GG+RFT+ G FN+V+I+NVGG G V SV+++GSK W M+RNWG Sbjct: 21 GMCSNGWIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTATNFCP-----TNNNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWG 202 HSP 2 Score: 40.4318 bits (93), Expect = 2.041e-52 Identity = 18/34 (52.94%), Postives = 24/34 (70.59%), Query Frame = 3 Query: 681 GKNWQTNSYLNGQSLSFQLTASDGRTVTSNNVVP 782 G NWQ++ L GQ LSF++T +D +T T NVVP Sbjct: 202 GANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVP 235 The following BLAST results are available for this feature:
BLAST of EY702271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702271 ID=EY702271; Name=EY702271; organism=Citrus sinensis; type=EST; length=900bpback to top |