EY702271

Overview
NameEY702271
Unique NameEY702271
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12590 contig Csv1_Contig12590:20..903. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 1.087e-50
Identity = 93/181 (51.38%), Postives = 117/181 (64.64%), Query Frame = 2
Query:  155 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGG--WCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIK-GSKTGWQAMSRNWG 682
            W   HATFY              YGNLY+ GYGT+TAALST LF +G  CG+CY+M+C      C  GS  I VTATN CPPN A   D GG  WCNPP  HFD+++PAF+++A +RAGIVP+ +RR+PCA+ GG+RF + G+ Y+ L  + NV GAGDV  + +K G   GW  MS NWG
Sbjct:   37 WTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWG 216          

HSP 2 Score: 27.7202 bits (60), Expect = 1.087e-50
Identity = 13/35 (37.14%), Postives = 24/35 (68.57%), Query Frame = 3
Query:  681 GKNWQTNSYLNGQSLSFQLTA-SDGRTVTSNNVVP 782
            G ++Q  + L GQ+LSF++T+ + G+T+ +  V P
Sbjct:  216 GASYQAFAQLGGQALSFKVTSYTTGQTILAAGVTP 250          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.801e-50
Identity = 102/195 (52.31%), Postives = 121/195 (62.05%), Query Frame = 2
Query:  152 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPGSII-VTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQK------LANQFLS 709
            GW  G ATFY              YGNLY QGYG N AALST LFNNG SCG CY + C  D  P  C  G+ I VT TNFCPPN  L    GGWCN    HFDM++PA+  I  Y AGIVPI ++++ C + GG+RFT+ G +YF LVL+TN+ G+G + S+S+KGS TGW  MSRNWG        LA Q LS
Sbjct:   22 GWLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGTAITVTGTNFCPPNYDLPY--GGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQCLAGLAGQALS 214          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3)

HSP 1 Score: 179.489 bits (454), Expect = 2.006e-49
Identity = 84/154 (54.55%), Postives = 108/154 (70.13%), Query Frame = 2
Query:  224 YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQ 685
            YG+L   GYG  TAALSTALFN+G SCG+CYE+ C  +P+ CL GSI +TAT+ CPP  A       WC  P +HFD++ P F++IAQ +A +VP+ +RR+PCAK GG++F V G+     +L  NVGGAGD+ +VS KGSKT W  MSR WGQ
Sbjct:   69 YGDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSGSIKITATDLCPPGSA-------WCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQ 215          

HSP 2 Score: 38.5058 bits (88), Expect = 2.006e-49
Identity = 18/40 (45.00%), Postives = 24/40 (60.00%), Query Frame = 3
Query:  681 GKNWQTNSYLNGQSLSFQLTASDGRTVTSNNVVPEIGNLG 800
            G+NW TN  L GQS+S ++T SDG T    +V+P     G
Sbjct:  214 GQNWTTNVNLTGQSVSLRVTTSDGITKDFTDVMPASWGFG 253          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.371e-49
Identity = 98/194 (50.52%), Postives = 122/194 (62.89%), Query Frame = 2
Query:  155 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQK------LANQFLS 709
            W  G ATFY              YGNLY QGYG N AALST LFN+G SCG CY + C+    P WC  G +I VT TN+CPPN  L    GGWCN    HFDM++PA+  I  Y AGI+PI ++++ C + GG+RFT+NG +YF LVL+TN+ G+G + S+S+KGS TGW  M+RNWG        LA Q LS
Sbjct:   23 WLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYCPPNYDLPY--GGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALS 214          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.289e-48
Identity = 78/156 (50.00%), Postives = 109/156 (69.87%), Query Frame = 2
Query:  224 YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQ 685
            YG+L    +   +A LS  LFN G SCG+C E++C N  +WCL GS  ++VTAT+FCPPN  LS+D GGWCN P +H +++  AF  IA+ RA ++PI +RR+ C ++GG+RF+++G S+F  VLI+NVG  G+V  V +KG  T W  M+RNWGQ
Sbjct:   53 YGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQ 208          

HSP 2 Score: 38.891 bits (89), Expect = 6.289e-48
Identity = 17/40 (42.50%), Postives = 25/40 (62.50%), Query Frame = 3
Query:  681 GKNWQTNSYLNGQSLSFQLTASDGRTVTSNNVVPEIGNLG 800
            G+NW ++  L GQSLSF++T   G+T+ S +V P     G
Sbjct:  207 GQNWHSSLDLIGQSLSFEVTLKGGKTIASYDVAPPYWRFG 246          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 9.962e-48
Identity = 93/192 (48.44%), Postives = 119/192 (61.98%), Query Frame = 2
Query:  155 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQK------LANQFLS 709
            W+   AT+Y              YG+L   GYG  T  LS  LF  G  CG+C+E++C +D +WC+PG SII+TATNFC PN     D GG CNPP +HF +   AF +IA ++AG +P+ +RRI C K+G +RFTV+G   F  VLITNV G+GD+ +V IKGS+TGW  M RNWGQ       L NQ LS
Sbjct:   40 WRPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGTSIILTATNFCAPNYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALS 231          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 5.466e-46
Identity = 90/182 (49.45%), Postives = 113/182 (62.09%), Query Frame = 2
Query:  155 WQSGHATFYXXXXXXXXXXXXXX--YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTG--WQAMSRNWG 682
            W  G ATFY                  N     Y T TAALST LF +G  CG CYE++C   P WC PGS  +++T TN CPPN  L ND+GGWCNPP  HFDMA P+FL++AQ  AGIVP+ +RR+PC + GG+RF + G+ Y+ L+ + NVGGAGDV S+S+K S  G  W   + NWG
Sbjct:   52 WHDGSATFYGDPSGMGDDFGGACGYVSNDIVSLYSTKTAALSTPLFADGNGCGQCYELRCVKSP-WCNPGSPSVVITGTNLCPPNWYLPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWG 232          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 9.649e-43
Identity = 91/194 (46.91%), Postives = 115/194 (59.28%), Query Frame = 2
Query:  155 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE--NDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQK------LANQFLS 709
            W  G ATFY              YGNLY Q YG N AALST LFN+G SCG CY + C+    P WC  G +I VT TN+           GGWCN    +FDM++PA+  I  Y AGIVPI ++++ C + GG+RF +NG +YF LVL+TN+ G+G + S+S+KGS TGW  M+RNWG        LA Q LS
Sbjct:   23 WLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGKAITVTGTNY-----------GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALS 205          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.675e-34
Identity = 74/180 (41.11%), Postives = 110/180 (61.11%), Query Frame = 2
Query:  149 GGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQ 685
            G W  GHATFY               G   + GYG  TAA+S ALF+NG  CG+CYE+K ++        +++VTATN  PP +   N   G      +HFD+  PAFL IA+ + G+VP+S+R++ C ++GGI++T+ G+  +N+V++ NVGGAGDV  +++KG+K   W  + R+WGQ
Sbjct:   80 GPWVDGHATFYGGRDASGTTEGGAC-GYKDADGYGAMTAAVSPALFDNGAGCGACYELKGDSGK------TVVVTATNQAPPPV---NGMKG------EHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQ 243          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 2.797e-20
Identity = 60/191 (31.41%), Postives = 90/191 (47.12%), Query Frame = 2
Query:  146 GGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKGGIRFTVNGHS--YFNLVLITNVGGAGDVHSVSIKGSK--TGWQAMSRNWG 682
            G GW SG AT+Y              Y +   Q  + +  AA   +LF NG  CGSCY++KC  + + C    + V  T+ CP         GG C     HFDM+  AF  +A          AG++ I ++R+PC     + F V+  S  Y+  +L+    G GD+ +V I  ++   GW+AM ++WG
Sbjct:   42 GYGWSSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKCTGN-RACSGRPVTVVITDSCP---------GGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWG 222          

HSP 2 Score: 28.8758 bits (63), Expect = 2.797e-20
Identity = 14/44 (31.82%), Postives = 22/44 (50.00%), Query Frame = 3
Query:  660 KQCQGTGGKNWQTNSYLN---GQSLSFQLTASDGRTVTSNNVVP 782
            K  Q + G  W+ NS          S +LT+  G+ + +NNV+P
Sbjct:  215 KAMQQSWGATWRLNSNTGKPLSPPFSIRLTSGSGKVLVANNVIP 258          
The following BLAST results are available for this feature:
BLAST of EY702271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
EXP30_ORYSJ1.087e-5051.38Putative expansin-A30 OS=Oryza sativa subsp. japon... [more]
EXP18_ORYSJ2.801e-5052.31Expansin-A18 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP21_ARATH2.006e-4954.55Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=... [more]
EXP19_ORYSJ2.371e-4950.52Expansin-A19 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP20_ARATH6.289e-4850.00Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=... [more]
EXP13_ARATH9.962e-4848.44Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=... [more]
EXP17_ORYSJ5.466e-4649.45Expansin-A17 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP20_ORYSJ9.649e-4346.91Expansin-A20 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP26_ORYSJ3.675e-3441.11Expansin-A26 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPB5_ORYSJ2.797e-2031.41Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXP... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-005-A07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702271 ID=EY702271; Name=EY702271; organism=Citrus sinensis; type=EST; length=900bp
CCACGCGTCCGTTTTTCTTTACAAAAAAACACATAAACATAAGCAGCCAG
CAGTAGCAGCCATGACCAATATTGCAGCATCATCTAGTGTTGCTCTCCTT
TTGTTTGTGCTCAATTTTTGCTTTCGTGGCACATTTGGAGACTATGGTGG
TGGGTGGCAAAGTGGCCATGCAACTTTCTATGGCGGGGGTGATGCTTCCG
GCACAATGGGTGGTGCTTGTGGGTATGGCAATTTGTACAGCCAAGGCTAT
GGGACTAACACTGCAGCACTCAGTACCGCTCTATTCAACAATGGCCTAAG
CTGTGGTTCATGCTATGAAATGAAATGTGAAAATGACCCCAAGTGGTGCC
TCCCCGGCTCCATCATTGTCACCGCCACCAACTTCTGCCCACCTAACCTT
GCCCTGTCTAACGACAACGGCGGTTGGTGCAATCCTCCCCTCCAGCACTT
TGACATGGCTGAGCCCGCTTTCTTGCAAATTGCCCAATACCGCGCCGGTA
TCGTCCCAATTTCCTTCAGAAGGATCCCGTGTGCGAAGAAAGGAGGAATA
AGGTTTACCGTCAATGGACACTCATACTTCAACCTGGTTTTGATCACAAA
TGTCGGAGGAGCAGGAGATGTACATTCAGTATCAATCAAGGGTTCAAAGA
CTGGATGGCAAGCAATGTCAAGGAACTGGGGGCAAAAATTGGCAAACCAA
TTCTTATCTTAACGGCCAAAGTCTTTCTTTCCAATTGACAGCCAGTGACG
GCAGGACTGTGACTAGCAACAATGTTGTGCCTGAAATTGGCAATTTGGGA
AACCTTTGAAGGTGGTAGTTTTAGAATTTAAAAAAGGGATCACAATTTGG
ATATTAATTGAATTTGGACTGTTTTGGAGGGAAGAAGGGGGAAAAAGGGT
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