EY702271
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.358e-18 Identity = 55/193 (28.50%), Postives = 87/193 (45.08%), Query Frame = 2 Query: 152 GWQSGHATFYXXXXXXXXXXXXXXY-GNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG---GIRFTVNGHSYFNLVLITNVGGAGDVHSVSI-----KGSKTGWQAMSRNWG 682 GW G AT+Y Y G++ + + AA S +++ +G CGSCY++KC +P C + V T+ CP GG C HFD++ AF +A+ AG +P+ + R+PC +G R + Y+ VL+ + G GD+ +V + G W AM ++WG Sbjct: 37 GWSIGGATWYGPANGSGTDGGACGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVKCSGNPS-CSGKPVTVVLTDLCP---------GGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWG 219 HSP 2 Score: 26.1794 bits (56), Expect = 5.358e-18 Identity = 9/20 (45.00%), Postives = 16/20 (80.00%), Query Frame = 3 Query: 723 LSFQLTASDGRTVTSNNVVP 782 +S +LT+ GRT+ ++NV+P Sbjct: 235 MSIRLTSGSGRTLVASNVIP 254
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 4.380e-17 Identity = 56/190 (29.47%), Postives = 88/190 (46.32%), Query Frame = 2 Query: 155 WQSGHATFYXXXXXXXXXXXXXXY-GNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIA------QYR-AGIVPISFRRIPCAKKGGIRFT----VNGHSYFNLVLITNVGGAGDVHSVSI--KGSKTGWQAMSRNWG 682 W +G AT+Y Y G ++ + + AA S +++ +GL CGSCY++KC + C + V T+ CP GG C HFD++ AF +A Q R AG++ I + R+PC GG++ T V + + VL+ G GD+ V + G+ W M ++WG Sbjct: 37 WSNGGATWYGAANGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSA-CSGNPVTVVLTDECP---------GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWG 215 HSP 2 Score: 29.261 bits (64), Expect = 4.380e-17 Identity = 15/41 (36.59%), Postives = 26/41 (63.41%), Query Frame = 3 Query: 663 QCQGTGGKNWQTNSYLNGQS-LSFQLTASDGRTVTSNNVVP 782 Q Q + G W+ N+ Q+ S +LT+S G+T+ ++NV+P Sbjct: 209 QMQQSWGAVWKLNAGSALQAPFSIRLTSSSGKTLVASNVIP 249
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.628e-16 Identity = 56/188 (29.79%), Postives = 84/188 (44.68%), Query Frame = 2 Query: 152 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG-GIRFTVN--GHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWG 682 GW + AT+Y Y Q + + AA S +L+ G CG+CYE+KC + C V T+ CP GG C HFDM+ + +A+ AGI+ + +RR+PC G I F V+ + ++ VLI G GD+++V + + GW M +NWG Sbjct: 63 GWAAAGATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKGGKGCGACYEVKCTTNAA-CSGQPATVVITDECP---------GGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEAGCGWTPMVQNWG 240 HSP 2 Score: 26.1794 bits (56), Expect = 4.628e-16 Identity = 14/38 (36.84%), Postives = 23/38 (60.53%), Query Frame = 3 Query: 681 GKNWQTNSYLNGQSL----SFQLTASDGRTVTSNNVVP 782 G W+ NS G++L S +LT+ G+ + +NNV+P Sbjct: 240 GALWRYNSN-TGKALKAPFSLRLTSDSGKVLVANNVIP 276
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.238e-15 Identity = 57/191 (29.84%), Postives = 86/191 (45.03%), Query Frame = 2 Query: 155 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIA------QYR-AGIVPISFRRIPCAKKGGIRFTV-----NGHSYFNLVLITNVGGAGDVHSVSI--KGSKTGWQAMSRNWG 682 W +G AT+Y Y Q + + AA S +++ +GL CGSCY++KC + C + V T+ CP GG C HFD++ AF +A Q R AG++ I + R+PC GG+ T + SYF VL+ G GD+ + + G+ W M ++WG Sbjct: 37 WSNGGATWYGAANGAGSDGGACGYQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCSGNSA-CSGNPVTVVLTDECP---------GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVMLTFAVDAGSNPSYF-AVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQSWG 215 HSP 2 Score: 27.7202 bits (60), Expect = 2.238e-15 Identity = 14/39 (35.90%), Postives = 26/39 (66.67%), Query Frame = 3 Query: 669 QGTGGKNWQTNSYLNGQS-LSFQLTASDGRTVTSNNVVP 782 Q + G W+ ++ Q+ LS +LT+S G+T+ ++NV+P Sbjct: 211 QQSWGAVWKLSAGAALQAPLSIRLTSSSGKTLVASNVIP 249
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXPB7_ORYSJ (Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXPB7 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.229e-13 Identity = 60/209 (28.71%), Postives = 90/209 (43.06%), Query Frame = 2 Query: 128 GTFGDYGGGWQSGHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWC-LPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG-GIRFTV--NGHSYFNLVLITNVGGAGDVHSV----------SIKGSKTG-WQAMSRNWG 682 G+ G GGGW + AT+Y G N+ + T+ + LF +G CGSCY+++C P LP ++I+T N+ P + L HFD++ AF +A+ AGI+ I FRR+PC G + F V + + +L+ G GDV V + G+ TG W M +WG Sbjct: 83 GSSGGGGGGWLNARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPACSGLPETVIITDMNYYPVS--------------LYHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPGLTVTFHVEQGSNPVYMAILVEYENGDGDVVQVDLMESRYSTGGVDGTPTGVWTPMRESWG 277
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXPB6_ORYSJ (Expansin-B6 OS=Oryza sativa subsp. japonica GN=EXPB6 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.732e-12 Identity = 58/202 (28.71%), Postives = 84/202 (41.58%), Query Frame = 2 Query: 143 YGGGWQSGHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPG--SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG-GIRFTVNGHS---YFNLVLITNVGGAGDVHSVSIKGSKTG-------WQAMSRNWG 682 YG GW AT+Y G N+ + + T+ + +F +G CGSCY+++C DP C ++I+T N+ P HFD++ AF +A+ +GI+ I FRR+PC G I F V S YF VL+ GDV V + SK+ W M +WG Sbjct: 40 YGSGWLPARATWYGAPTGAGPDDNGGACGFKNVNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCNKDPS-CSGNIETVIITDMNYYP--------------VARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSNPVYF-AVLVEYEDLDGDVVQVDLMESKSAYGGATGVWTPMRESWG 225 HSP 2 Score: 24.6386 bits (52), Expect = 5.732e-12 Identity = 11/35 (31.43%), Postives = 21/35 (60.00%), Query Frame = 3 Query: 681 GKNWQTNSYLNGQS-LSFQLTASDGRTVTSNNVVP 782 G W+ +S Q+ S ++ + G+T+ +NNV+P Sbjct: 225 GSIWRLDSNHRLQAPFSLRIRSDSGKTLVANNVIP 259
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXB16_ORYSJ (Expansin-B16 OS=Oryza sativa subsp. japonica GN=EXPB16 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.709e-11 Identity = 58/189 (30.69%), Postives = 81/189 (42.86%), Query Frame = 2 Query: 155 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQ-GYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIA-------QYRAGIVPISFRRIPCAKKGG--IRFTVN-GHSYFNLVLITNV-GGAGDVHSVSIKGSKTG-WQAMSRNWG 682 W AT+Y YG L T A+S LF G CG+CY+++C D C ++ V T+ CP GG C HFD++ AF ++A G + + +RR C K GG I F VN G + F L L+ G GD+ S+ +K + + WQ M WG Sbjct: 45 WHPATATWYGSADGDGSDGGACGYGTLVDVVPMKTRVGAVSPVLFKGGEGCGACYKVRC-LDASICSRRAVTVIVTDECP---------GGVCAFGRTHFDLSGAAFARLAVAGHGGQLQNRGEISVVYRRTAC-KYGGKNIAFHVNEGSTTFWLSLLVEFEDGDGDIGSMQLKQANSAQWQDMKHIWG 222 The following BLAST results are available for this feature:
BLAST of EY702271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702271 ID=EY702271; Name=EY702271; organism=Citrus sinensis; type=EST; length=900bpback to top |