EY702271

Overview
NameEY702271
Unique NameEY702271
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12590 contig Csv1_Contig12590:20..903. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.358e-18
Identity = 55/193 (28.50%), Postives = 87/193 (45.08%), Query Frame = 2
Query:  152 GWQSGHATFYXXXXXXXXXXXXXXY-GNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG---GIRFTVNGHSYFNLVLITNVGGAGDVHSVSI-----KGSKTGWQAMSRNWG 682
            GW  G AT+Y              Y G++    + +  AA S +++ +G  CGSCY++KC  +P  C    + V  T+ CP         GG C     HFD++  AF  +A+         AG +P+ + R+PC  +G     R     + Y+  VL+ +  G GD+ +V +      G    W AM ++WG
Sbjct:   37 GWSIGGATWYGPANGSGTDGGACGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVKCSGNPS-CSGKPVTVVLTDLCP---------GGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWG 219          

HSP 2 Score: 26.1794 bits (56), Expect = 5.358e-18
Identity = 9/20 (45.00%), Postives = 16/20 (80.00%), Query Frame = 3
Query:  723 LSFQLTASDGRTVTSNNVVP 782
            +S +LT+  GRT+ ++NV+P
Sbjct:  235 MSIRLTSGSGRTLVASNVIP 254          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 4.380e-17
Identity = 56/190 (29.47%), Postives = 88/190 (46.32%), Query Frame = 2
Query:  155 WQSGHATFYXXXXXXXXXXXXXXY-GNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIA------QYR-AGIVPISFRRIPCAKKGGIRFT----VNGHSYFNLVLITNVGGAGDVHSVSI--KGSKTGWQAMSRNWG 682
            W +G AT+Y              Y G ++   + +  AA S +++ +GL CGSCY++KC  +   C    + V  T+ CP         GG C     HFD++  AF  +A      Q R AG++ I + R+PC   GG++ T    V  +  +  VL+    G GD+  V +   G+   W  M ++WG
Sbjct:   37 WSNGGATWYGAANGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSA-CSGNPVTVVLTDECP---------GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWG 215          

HSP 2 Score: 29.261 bits (64), Expect = 4.380e-17
Identity = 15/41 (36.59%), Postives = 26/41 (63.41%), Query Frame = 3
Query:  663 QCQGTGGKNWQTNSYLNGQS-LSFQLTASDGRTVTSNNVVP 782
            Q Q + G  W+ N+    Q+  S +LT+S G+T+ ++NV+P
Sbjct:  209 QMQQSWGAVWKLNAGSALQAPFSIRLTSSSGKTLVASNVIP 249          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.628e-16
Identity = 56/188 (29.79%), Postives = 84/188 (44.68%), Query Frame = 2
Query:  152 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG-GIRFTVN--GHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWG 682
            GW +  AT+Y              Y     Q  + +  AA S +L+  G  CG+CYE+KC  +   C      V  T+ CP         GG C     HFDM+  +   +A+         AGI+ + +RR+PC   G  I F V+   + ++  VLI    G GD+++V +  +  GW  M +NWG
Sbjct:   63 GWAAAGATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKGGKGCGACYEVKCTTNAA-CSGQPATVVITDECP---------GGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEAGCGWTPMVQNWG 240          

HSP 2 Score: 26.1794 bits (56), Expect = 4.628e-16
Identity = 14/38 (36.84%), Postives = 23/38 (60.53%), Query Frame = 3
Query:  681 GKNWQTNSYLNGQSL----SFQLTASDGRTVTSNNVVP 782
            G  W+ NS   G++L    S +LT+  G+ + +NNV+P
Sbjct:  240 GALWRYNSN-TGKALKAPFSLRLTSDSGKVLVANNVIP 276          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.238e-15
Identity = 57/191 (29.84%), Postives = 86/191 (45.03%), Query Frame = 2
Query:  155 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIA------QYR-AGIVPISFRRIPCAKKGGIRFTV-----NGHSYFNLVLITNVGGAGDVHSVSI--KGSKTGWQAMSRNWG 682
            W +G AT+Y              Y     Q  + +  AA S +++ +GL CGSCY++KC  +   C    + V  T+ CP         GG C     HFD++  AF  +A      Q R AG++ I + R+PC   GG+  T      +  SYF  VL+    G GD+  + +   G+   W  M ++WG
Sbjct:   37 WSNGGATWYGAANGAGSDGGACGYQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCSGNSA-CSGNPVTVVLTDECP---------GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVMLTFAVDAGSNPSYF-AVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQSWG 215          

HSP 2 Score: 27.7202 bits (60), Expect = 2.238e-15
Identity = 14/39 (35.90%), Postives = 26/39 (66.67%), Query Frame = 3
Query:  669 QGTGGKNWQTNSYLNGQS-LSFQLTASDGRTVTSNNVVP 782
            Q + G  W+ ++    Q+ LS +LT+S G+T+ ++NV+P
Sbjct:  211 QQSWGAVWKLSAGAALQAPLSIRLTSSSGKTLVASNVIP 249          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXPB7_ORYSJ (Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXPB7 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.229e-13
Identity = 60/209 (28.71%), Postives = 90/209 (43.06%), Query Frame = 2
Query:  128 GTFGDYGGGWQSGHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWC-LPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG-GIRFTV--NGHSYFNLVLITNVGGAGDVHSV----------SIKGSKTG-WQAMSRNWG 682
            G+ G  GGGW +  AT+Y               G  N+    +   T+  +  LF +G  CGSCY+++C   P    LP ++I+T  N+ P +              L HFD++  AF  +A+         AGI+ I FRR+PC   G  + F V    +  +  +L+    G GDV  V           + G+ TG W  M  +WG
Sbjct:   83 GSSGGGGGGWLNARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPACSGLPETVIITDMNYYPVS--------------LYHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPGLTVTFHVEQGSNPVYMAILVEYENGDGDVVQVDLMESRYSTGGVDGTPTGVWTPMRESWG 277          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXPB6_ORYSJ (Expansin-B6 OS=Oryza sativa subsp. japonica GN=EXPB6 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.732e-12
Identity = 58/202 (28.71%), Postives = 84/202 (41.58%), Query Frame = 2
Query:  143 YGGGWQSGHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPG--SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG-GIRFTVNGHS---YFNLVLITNVGGAGDVHSVSIKGSKTG-------WQAMSRNWG 682
            YG GW    AT+Y               G  N+    + + T+  +  +F +G  CGSCY+++C  DP  C     ++I+T  N+ P                  HFD++  AF  +A+         +GI+ I FRR+PC   G  I F V   S   YF  VL+      GDV  V +  SK+        W  M  +WG
Sbjct:   40 YGSGWLPARATWYGAPTGAGPDDNGGACGFKNVNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCNKDPS-CSGNIETVIITDMNYYP--------------VARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSNPVYF-AVLVEYEDLDGDVVQVDLMESKSAYGGATGVWTPMRESWG 225          

HSP 2 Score: 24.6386 bits (52), Expect = 5.732e-12
Identity = 11/35 (31.43%), Postives = 21/35 (60.00%), Query Frame = 3
Query:  681 GKNWQTNSYLNGQS-LSFQLTASDGRTVTSNNVVP 782
            G  W+ +S    Q+  S ++ +  G+T+ +NNV+P
Sbjct:  225 GSIWRLDSNHRLQAPFSLRIRSDSGKTLVANNVIP 259          
BLAST of EY702271 vs. ExPASy Swiss-Prot
Match: EXB16_ORYSJ (Expansin-B16 OS=Oryza sativa subsp. japonica GN=EXPB16 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.709e-11
Identity = 58/189 (30.69%), Postives = 81/189 (42.86%), Query Frame = 2
Query:  155 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQ-GYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIA-------QYRAGIVPISFRRIPCAKKGG--IRFTVN-GHSYFNLVLITNV-GGAGDVHSVSIKGSKTG-WQAMSRNWG 682
            W    AT+Y              YG L       T   A+S  LF  G  CG+CY+++C  D   C   ++ V  T+ CP         GG C     HFD++  AF ++A           G + + +RR  C K GG  I F VN G + F L L+     G GD+ S+ +K + +  WQ M   WG
Sbjct:   45 WHPATATWYGSADGDGSDGGACGYGTLVDVVPMKTRVGAVSPVLFKGGEGCGACYKVRC-LDASICSRRAVTVIVTDECP---------GGVCAFGRTHFDLSGAAFARLAVAGHGGQLQNRGEISVVYRRTAC-KYGGKNIAFHVNEGSTTFWLSLLVEFEDGDGDIGSMQLKQANSAQWQDMKHIWG 222          
The following BLAST results are available for this feature:
BLAST of EY702271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
EXB14_ORYSJ5.358e-1828.50Putative expansin-B14 OS=Oryza sativa subsp. japon... [more]
EXB15_ORYSJ4.380e-1729.47Expansin-B15 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXB11_ORYSJ4.628e-1629.79Expansin-B11 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXB18_ORYSJ2.238e-1529.84Expansin-B18 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPB7_ORYSJ1.229e-1328.71Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPB6_ORYSJ5.732e-1228.71Expansin-B6 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXB16_ORYSJ5.709e-1130.69Expansin-B16 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-005-A07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702271 ID=EY702271; Name=EY702271; organism=Citrus sinensis; type=EST; length=900bp
CCACGCGTCCGTTTTTCTTTACAAAAAAACACATAAACATAAGCAGCCAG
CAGTAGCAGCCATGACCAATATTGCAGCATCATCTAGTGTTGCTCTCCTT
TTGTTTGTGCTCAATTTTTGCTTTCGTGGCACATTTGGAGACTATGGTGG
TGGGTGGCAAAGTGGCCATGCAACTTTCTATGGCGGGGGTGATGCTTCCG
GCACAATGGGTGGTGCTTGTGGGTATGGCAATTTGTACAGCCAAGGCTAT
GGGACTAACACTGCAGCACTCAGTACCGCTCTATTCAACAATGGCCTAAG
CTGTGGTTCATGCTATGAAATGAAATGTGAAAATGACCCCAAGTGGTGCC
TCCCCGGCTCCATCATTGTCACCGCCACCAACTTCTGCCCACCTAACCTT
GCCCTGTCTAACGACAACGGCGGTTGGTGCAATCCTCCCCTCCAGCACTT
TGACATGGCTGAGCCCGCTTTCTTGCAAATTGCCCAATACCGCGCCGGTA
TCGTCCCAATTTCCTTCAGAAGGATCCCGTGTGCGAAGAAAGGAGGAATA
AGGTTTACCGTCAATGGACACTCATACTTCAACCTGGTTTTGATCACAAA
TGTCGGAGGAGCAGGAGATGTACATTCAGTATCAATCAAGGGTTCAAAGA
CTGGATGGCAAGCAATGTCAAGGAACTGGGGGCAAAAATTGGCAAACCAA
TTCTTATCTTAACGGCCAAAGTCTTTCTTTCCAATTGACAGCCAGTGACG
GCAGGACTGTGACTAGCAACAATGTTGTGCCTGAAATTGGCAATTTGGGA
AACCTTTGAAGGTGGTAGTTTTAGAATTTAAAAAAGGGATCACAATTTGG
ATATTAATTGAATTTGGACTGTTTTGGAGGGAAGAAGGGGGAAAAAGGGT
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