EY702268

Overview
NameEY702268
Unique NameEY702268
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY702268 vs. ExPASy Swiss-Prot
Match: TPS2_YEAST (Trehalose-phosphatase OS=Saccharomyces cerevisiae GN=TPS2 PE=1 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 7.798e-14
Identity = 38/108 (35.19%), Postives = 60/108 (55.56%), Query Frame = 1 
Query:  193 LSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKA--PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWF-SPCNKLGIAAEHGYFMRGSADEEWQNWGQNSDFGW 507
            L+   ++  Y ++K R  LFDYDGT+ P      A  PS  + +I+  LC D  N ++++SGR +  L KW      +LG++AEHG FM+  + ++W N  +  D  W
Sbjct:  557 LNRPVLLENYKQAKRRLFLFDYDGTLTPIVKDPAAAIPSARLYTILQKLCADPHNQIWIISGRDQKFLNKWLGGKLPQLGLSAEHGCFMKDVSCQDWVNLTEKVDMSW 664

HSP 2 Score: 23.0978 bits (48), Expect = 7.798e-14
Identity = 9/19 (47.37%), Postives = 10/19 (52.63%), Query Frame = 2 
Query:  584 LVWHHRECNPGFGTSRAKE 640
            L WH+R   P  G   AKE
Sbjct:  691 LTWHYRRTVPELGEFHAKE 709
[Close]
BLAST of EY702268 vs. ExPASy Swiss-Prot
Match: TPS2_SCHPO (Trehalose-phosphatase OS=Schizosaccharomyces pombe GN=tps2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.293e-12
Identity = 32/107 (29.91%), Postives = 61/107 (57.01%), Query Frame = 1 
Query:  193 LSIDAIVSAYLRSKSRAILFDYDGTVMP--QTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCNKLGIAAEHGYFMRGSADEEWQNWGQNSDFGW 507
            L+ + ++  Y  +K R  L DYDGT++   + SI+  P+  ++  +  L +D+RN V+++SGR +  + +W    ++LG+++EHG  +R      W +  +N D  W
Sbjct:  561 LTYNILIKPYRNAKRRLFLLDYDGTLIESARNSIDAVPTDRLLRTLKRLASDSRNIVWILSGRSQKFMEEWMGDISELGLSSEHGSAIRPPLAGSWSSCAENLDLSW 667
The following BLAST results are available for this feature:
BLAST of EY702268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
TPS2_YEAST7.798e-1435.19Trehalose-phosphatase OS=Saccharomyces cerevisiae ... [more]
TPS2_SCHPO2.293e-1229.91Trehalose-phosphatase OS=Schizosaccharomyces pombe... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-005-A03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702268 ID=EY702268; Name=EY702268; organism=Citrus sinensis; type=EST; length=891bp
CCACGCGTCCGGAAACAGTTGCGCCATGAGAAGCATTATAGGTATGTTAG
TACTCATGATGTGGCATACTGGGCTCGAAGCTTCTTTCAAGATATGGAAA
GGACTTGCAAAGATCATTTTAAAAGACGTTGTTGGGGAATTGGCTTGAGC
TTTGGTTTCAGAGTTGTAGCTTTGGATCCTAATTTTAGAAAGTTGTCAAT
CGATGCCATTGTTTCTGCCTATCTAAGGTCCAAAAGTAGGGCTATTCTGT
TTGATTATGATGGAACTGTCATGCCCCAAACGTCTATCAACAAGGCTCCA
AGTCAAGCAGTGATCTCAATCATTAATACTCTTTGCAATGATGCCAGGAA
TACTGTATTTGTCGTTAGTGGAAGAGGAAGGGATTGTTTAGGCAAGTGGT
TCTCTCCATGCAACAAACTTGGAATTGCTGCTGAACATGGATACTTCATG
AGGGGGTCTGCTGATGAGGAGTGGCAAAACTGGGGGCAAAATAGTGATTT
TGGGTGGAACCAATAGCTTGACCTGGTATGAAACTATATACAGAGTCCAC
TGATGGTTCCTAATTGGAATCCAAGAAAGGGGCCTGGTCTGGCACCATCG
AGAATGTAACCCGGGCTTTGGAACTAGCCGGGCAAAGGAGTGGGGGGATC
TCTAGAAAGGTGGCTGCTTTTGAACCCTGGCGGCGGCGGAAACAGAGACT
ATTAATTGAAGAGTTAAAACCCCGGGGGGCCCCCCAGCGGGTGGTGCAGT
AAACAATTTTCCCTCAATCGCCAAAAGTGGGGAGCCTGCCCCGTTTTTAA
TTTTCTTTCTGAGTCCCCACCCTTAACCACACTCCCGCCCACTCTCGGCC
GGGGGCCCCCAAGGGGGAACCGCCATCAAGAGGTGGGGGTG
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