EY702266

Overview
NameEY702266
Unique NameEY702266
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702266_ssr339 microsatellite EY702266_ssr339:339..356. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH1_ARATH (Adenosylhomocysteinase 1 OS=Arabidopsis thaliana GN=SAHH1 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.736e-42
Identity = 81/109 (74.31%), Postives = 91/109 (83.49%), Query Frame = 3
Query:    6 RPVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            R VFPET +GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EK++GKYEKKVYVLPKHLDEKV            T+L+K+Q+DY+S+  +GPYKP HYRY
Sbjct:  377 RWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKPPHYRY 485          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_WHEAT (Adenosylhomocysteinase OS=Triticum aestivum GN=SAHH PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.433e-40
Identity = 81/109 (74.31%), Postives = 88/109 (80.73%), Query Frame = 3
Query:    6 RPVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            R VFPET +GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EK++GKYEKKVYVLPKHLDEKV            T+LTK Q+DYIS+  +GPYK   YRY
Sbjct:  377 RWVFPETKTGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKSQSDYISIPIEGPYKLRLYRY 485          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_RHOBA (Adenosylhomocysteinase OS=Rhodopirellula baltica GN=ahcY PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.867e-30
Identity = 64/109 (58.72%), Postives = 79/109 (72.48%), Query Frame = 3
Query:    6 RPVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            R  F +T   II+LA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+EL++ +   KY  +VY+LPK LDE+V            T+LT+EQADYI V  +GPYKP HYRY
Sbjct:  340 RFTFNDTGRSIIILAKGRLVNLGCATGHPSFVMSSSFTNQVLAQMELYQNRDNDKYGVQVYLLPKELDEEVARLHLEAIGVKLTKLTQEQADYIGVPVEGPYKPNHYRY 448          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_XANOP (Adenosylhomocysteinase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=ahcY PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.184e-30
Identity = 65/107 (60.75%), Postives = 79/107 (73.83%), Query Frame = 3
Query:   12 VFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            VFP  N+ I +LA+GRL+NLGCATGHPSFVMS SF NQ +AQ++LW+++ T  YEKKVY+LPKHLDE+V            T LTK+QADY+ V   GPYKP HYRY
Sbjct:  377 VFPNGNA-IFLLADGRLVNLGCATGHPSFVMSNSFANQTLAQIDLWEKRDT--YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_XANOM (Adenosylhomocysteinase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ahcY PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.184e-30
Identity = 65/107 (60.75%), Postives = 79/107 (73.83%), Query Frame = 3
Query:   12 VFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            VFP  N+ I +LA+GRL+NLGCATGHPSFVMS SF NQ +AQ++LW+++ T  YEKKVY+LPKHLDE+V            T LTK+QADY+ V   GPYKP HYRY
Sbjct:  377 VFPNGNA-IFLLADGRLVNLGCATGHPSFVMSNSFANQTLAQIDLWEKRDT--YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_XANAC (Adenosylhomocysteinase OS=Xanthomonas axonopodis pv. citri GN=ahcY PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.184e-30
Identity = 65/107 (60.75%), Postives = 79/107 (73.83%), Query Frame = 3
Query:   12 VFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            VFP  N+ I +LA+GRL+NLGCATGHPSFVMS SF NQ +AQ++LW+++ T  YEKKVY+LPKHLDE+V            T LTK+QADY+ V   GPYKP HYRY
Sbjct:  377 VFPNGNA-IFLLADGRLVNLGCATGHPSFVMSNSFANQTLAQIDLWEKRDT--YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_XANC5 (Adenosylhomocysteinase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=ahcY PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.159e-30
Identity = 64/107 (59.81%), Postives = 80/107 (74.77%), Query Frame = 3
Query:   12 VFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            VFP  N+ I +LA+GRL+NLGCATGHPSFVMS SF NQ +AQ++LW+++ T  YEKKVY+LPKHLDE+V            T LTK+QADY+ V  +GP+KP HYRY
Sbjct:  377 VFPNGNA-IFLLADGRLVNLGCATGHPSFVMSNSFANQTLAQIDLWEKRDT--YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVPVEGPFKPDHYRY 480          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_MYCPA (Adenosylhomocysteinase OS=Mycobacterium paratuberculosis GN=ahcY PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.432e-30
Identity = 66/106 (62.26%), Postives = 77/106 (72.64%), Query Frame = 3
Query:   15 FPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            FP+T   IIVL+EGRL+NLG ATGHPSFVMS SF+NQVIAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTKEQA+YI V  DGPYK  HYRY
Sbjct:  393 FPDTGKSIIVLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGELTKLTKEQAEYIGVDVDGPYKADHYRY 496          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_PELCD (Adenosylhomocysteinase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.094e-30
Identity = 64/99 (64.65%), Postives = 76/99 (76.77%), Query Frame = 3
Query:   36 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            I VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+  ++ +YE KVYVLPK LDEKV            TR+T++QADY+ V  DGPYKP HYRY
Sbjct:  379 ITVLAKGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQ--NSDRYENKVYVLPKQLDEKVARLHLANLGVKLTRMTEKQADYLGVPVDGPYKPEHYRY 475          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_RALME (Adenosylhomocysteinase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=ahcY PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.064e-29
Identity = 64/106 (60.38%), Postives = 75/106 (70.75%), Query Frame = 3
Query:   15 FPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            FP+    II+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW E+ +GKY   VYVLPKHLDEKV            T LT++QA YI V  +GPYK  HYRY
Sbjct:  368 FPDGKK-IIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWAERDSGKYPVGVYVLPKHLDEKVARLQLRKLNAQLTELTEQQAAYIGVKKEGPYKADHYRY 472          
The following BLAST results are available for this feature:
BLAST of EY702266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
SAHH1_ARATH4.736e-4274.31Adenosylhomocysteinase 1 OS=Arabidopsis thaliana G... [more]
SAHH_WHEAT4.433e-4074.31Adenosylhomocysteinase OS=Triticum aestivum GN=SAH... [more]
SAHH_RHOBA1.867e-3058.72Adenosylhomocysteinase OS=Rhodopirellula baltica G... [more]
SAHH_XANOP3.184e-3060.75Adenosylhomocysteinase OS=Xanthomonas oryzae pv. o... [more]
SAHH_XANOM3.184e-3060.75Adenosylhomocysteinase OS=Xanthomonas oryzae pv. o... [more]
SAHH_XANAC3.184e-3060.75Adenosylhomocysteinase OS=Xanthomonas axonopodis p... [more]
SAHH_XANC54.159e-3059.81Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]
SAHH_MYCPA5.432e-3062.26Adenosylhomocysteinase OS=Mycobacterium paratuberc... [more]
SAHH_PELCD7.094e-3064.65Adenosylhomocysteinase OS=Pelobacter carbinolicus ... [more]
SAHH_RALME2.064e-2960.38Adenosylhomocysteinase OS=Ralstonia metallidurans ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-H10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702266 ID=EY702266; Name=EY702266; organism=Citrus sinensis; type=EST; length=893bp
CCACGCGTCCGGTCTTCCCCGAGACCAACTCAGGCATCATCGTGTTGGCT
GAGGGACGTCTCATGAACTTGGGATGTGCCACTGGGCACCCCAGCTTTGT
GATGTCCTGTTCCTTCACCAATCAGGTGATTGCCCAGCTTGAGCTCTGGA
AGGAGAAGAGCACCGGCAAGTACGAGAAGAAGGTGTATGTTCTGCCCAAG
CACCTCGATGAGAAGGTTGCTGCTCTTCACCTTGGCAAACTTGGAGCTAA
GCTCACCAGGCTCACCAAGGAGCAGGCTGACTACATCAGTGTGTCCGCCG
ATGGTCCTTACAAGCCTCTTCACTACAGGTACTAAGTGGAAGAAGAAGAA
GAAGAAGAGTGAATGTTTTGAGGGAAAGAAACAAAATATTTGGCCGGCTT
GATTGTTTTCAATGATGATCTGTAGTAGGATGTTAGGTTTAAATTTGGTA
GTAGTGTGTGTTTGGGTGGTGGGGAAAGTTTGGAGGAAAGAAACGGATTT
GTTTCACCTGATTGAAGACCATTTGGGATTTGAATAAGGTTTTGGATGGG
GCCGCGTCGGATTATGCTGTATTTGATGCAGATTTAAGTTTTGCTTGCTT
TGCTGCATCTTGGTATCCTTATTGTTTACTGATGAATGATCATAAAAAAA
AAAAAAAAATCTTTTTCTCCACTACAAACGACACCCTAAATAACTAATAT
TTACACCACCTCACGAATAATTTTCCCCTCGGGTTTCCGGAGTGCTGCCC
ACCTCCTTCTCTTCCCTGCGGGGCCTTTATTAAATAGATCAAACTAATAC
ATCGTGTGTCTCCAATTCATTAGTCTTAATAAAGTGACCTATAAATCCAT
ATTATTGCCGCTTCTTTACAACAAGCGTGGGTGAAAAACCCTC
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