EY702266

Overview
NameEY702266
Unique NameEY702266
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702266_ssr339 microsatellite EY702266_ssr339:339..356. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBO (Adenosylhomocysteinase OS=Mycobacterium bovis GN=ahcY PE=1 SV=3)

HSP 1 Score: 126.716 bits (317), Expect = 1.747e-28
Identity = 63/106 (59.43%), Postives = 75/106 (70.75%), Query Frame = 3
Query:   15 FPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  392 FGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_GRAFK (Adenosylhomocysteinase OS=Gramella forsetii (strain KT0803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.747e-28
Identity = 61/99 (61.62%), Postives = 76/99 (76.77%), Query Frame = 3
Query:   36 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            II+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW  K+T +Y+ +VY+LPKHLDEKV            T L ++QA+YI V+ +GPYKP +YRY
Sbjct:  342 IILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELW--KNTDEYKNEVYMLPKHLDEKVAKLHLERIGVELTELKQDQAEYIGVTVEGPYKPEYYRY 438          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS3 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9311) GN=ahcY PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.282e-28
Identity = 64/99 (64.65%), Postives = 76/99 (76.77%), Query Frame = 3
Query:   36 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + S  +Y K+VYVLPKHLDE V            T L+K+QADYI+V  +GPYKP HYRY
Sbjct:  380 IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGS--EYGKEVYVLPKHLDEMVARLHLEKIGCKLTELSKDQADYINVPVEGPYKPDHYRY 476          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_LEPBL (Adenosylhomocysteinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=ahcY PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.282e-28
Identity = 64/106 (60.38%), Postives = 77/106 (72.64%), Query Frame = 3
Query:   15 FPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            FP+  S I+VLAEGRL+NLGCATGHPSFVMSCSFTNQV+AQ+EL+      KYE  VY LPKHLDEKV            T+L ++QADY+ V  +GP+KP +YRY
Sbjct:  336 FPDGKS-IVVLAEGRLVNLGCATGHPSFVMSCSFTNQVLAQIELY----NNKYELGVYTLPKHLDEKVAALHLEQLGVRLTKLNQKQADYLGVPLNGPFKPENYRY 436          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_LEPBJ (Adenosylhomocysteinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=ahcY PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.282e-28
Identity = 64/106 (60.38%), Postives = 77/106 (72.64%), Query Frame = 3
Query:   15 FPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            FP+  S I+VLAEGRL+NLGCATGHPSFVMSCSFTNQV+AQ+EL+      KYE  VY LPKHLDEKV            T+L ++QADY+ V  +GP+KP +YRY
Sbjct:  336 FPDGKS-IVVLAEGRLVNLGCATGHPSFVMSCSFTNQVLAQIELY----NNKYELGVYTLPKHLDEKVAALHLEQLGVRLTKLNQKQADYLGVPLNGPFKPENYRY 436          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_BURP8 (Adenosylhomocysteinase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=ahcY PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.282e-28
Identity = 66/107 (61.68%), Postives = 76/107 (71.03%), Query Frame = 3
Query:   12 VFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            +FP+    +I+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+ E S  KYE KVYVLPK LDEKV            T LT EQA YI V  +GP+KP HYRY
Sbjct:  370 IFPD-GKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFVEGS--KYENKVYVLPKQLDEKVARLHLARIGANLTELTSEQAGYIGVDKNGPFKPNHYRY 473          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_PROMM (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.980e-28
Identity = 64/99 (64.65%), Postives = 74/99 (74.75%), Query Frame = 3
Query:   36 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y  +VYVLPKHLDE V            T LTK+QADYISV  +GPYKP HYRY
Sbjct:  380 IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFSKGD--QYADQVYVLPKHLDEMVARLHLEKIGARLTELTKQQADYISVPVEGPYKPDHYRY 476          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS9 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9902) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.893e-28
Identity = 63/99 (63.64%), Postives = 75/99 (75.76%), Query Frame = 3
Query:   36 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y K+VYVLPKHLDE V            T L+K+QADYI+V  +GPYKP HYRY
Sbjct:  380 IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTK--ANEYGKEVYVLPKHLDEMVARLHLSKIGANLTELSKDQADYINVPVEGPYKPDHYRY 476          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_MYCUA (Adenosylhomocysteinase OS=Mycobacterium ulcerans (strain Agy99) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.893e-28
Identity = 62/106 (58.49%), Postives = 75/106 (70.75%), Query Frame = 3
Query:   15 FPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTK+QA+Y+ V  +GPYKP HYRY
Sbjct:  389 FGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGRLTKLTKDQAEYLGVDVEGPYKPDHYRY 492          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_MYCMM (Adenosylhomocysteinase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.893e-28
Identity = 62/106 (58.49%), Postives = 75/106 (70.75%), Query Frame = 3
Query:   15 FPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTK+QA+Y+ V  +GPYKP HYRY
Sbjct:  389 FGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGRLTKLTKDQAEYLGVDVEGPYKPDHYRY 492          
The following BLAST results are available for this feature:
BLAST of EY702266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
SAHH_MYCBO1.747e-2859.43Adenosylhomocysteinase OS=Mycobacterium bovis GN=a... [more]
SAHH_GRAFK1.747e-2861.62Adenosylhomocysteinase OS=Gramella forsetii (strai... [more]
SAHH_SYNS32.282e-2864.65Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_LEPBL2.282e-2860.38Adenosylhomocysteinase OS=Leptospira borgpeterseni... [more]
SAHH_LEPBJ2.282e-2860.38Adenosylhomocysteinase OS=Leptospira borgpeterseni... [more]
SAHH_BURP82.282e-2861.68Adenosylhomocysteinase OS=Burkholderia phymatum (s... [more]
SAHH_PROMM2.980e-2864.65Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_SYNS93.893e-2863.64Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_MYCUA3.893e-2858.49Adenosylhomocysteinase OS=Mycobacterium ulcerans (... [more]
SAHH_MYCMM3.893e-2858.49Adenosylhomocysteinase OS=Mycobacterium marinum (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-H10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702266 ID=EY702266; Name=EY702266; organism=Citrus sinensis; type=EST; length=893bp
CCACGCGTCCGGTCTTCCCCGAGACCAACTCAGGCATCATCGTGTTGGCT
GAGGGACGTCTCATGAACTTGGGATGTGCCACTGGGCACCCCAGCTTTGT
GATGTCCTGTTCCTTCACCAATCAGGTGATTGCCCAGCTTGAGCTCTGGA
AGGAGAAGAGCACCGGCAAGTACGAGAAGAAGGTGTATGTTCTGCCCAAG
CACCTCGATGAGAAGGTTGCTGCTCTTCACCTTGGCAAACTTGGAGCTAA
GCTCACCAGGCTCACCAAGGAGCAGGCTGACTACATCAGTGTGTCCGCCG
ATGGTCCTTACAAGCCTCTTCACTACAGGTACTAAGTGGAAGAAGAAGAA
GAAGAAGAGTGAATGTTTTGAGGGAAAGAAACAAAATATTTGGCCGGCTT
GATTGTTTTCAATGATGATCTGTAGTAGGATGTTAGGTTTAAATTTGGTA
GTAGTGTGTGTTTGGGTGGTGGGGAAAGTTTGGAGGAAAGAAACGGATTT
GTTTCACCTGATTGAAGACCATTTGGGATTTGAATAAGGTTTTGGATGGG
GCCGCGTCGGATTATGCTGTATTTGATGCAGATTTAAGTTTTGCTTGCTT
TGCTGCATCTTGGTATCCTTATTGTTTACTGATGAATGATCATAAAAAAA
AAAAAAAAATCTTTTTCTCCACTACAAACGACACCCTAAATAACTAATAT
TTACACCACCTCACGAATAATTTTCCCCTCGGGTTTCCGGAGTGCTGCCC
ACCTCCTTCTCTTCCCTGCGGGGCCTTTATTAAATAGATCAAACTAATAC
ATCGTGTGTCTCCAATTCATTAGTCTTAATAAAGTGACCTATAAATCCAT
ATTATTGCCGCTTCTTTACAACAAGCGTGGGTGAAAAACCCTC
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