EY702266

Overview
NameEY702266
Unique NameEY702266
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702266_ssr339 microsatellite EY702266_ssr339:339..356. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_MESSB (Adenosylhomocysteinase OS=Mesorhizobium sp. (strain BNC1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.893e-28
Identity = 65/106 (61.32%), Postives = 77/106 (72.64%), Query Frame = 3
Query:   15 FPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            FP+    II+L+EGRL+NLG ATGHPSFVMS SFTNQV+AQ+ELW   S  +YE KVYVLPKHLDEKV            T+L+ EQA YI V+ +GP+KP HYRY
Sbjct:  363 FPD-GKRIILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQIELWTRGS--QYENKVYVLPKHLDEKVARLHLAKLGANLTKLSPEQAAYIGVTPEGPFKPDHYRY 465          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_SYNSC (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9605) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.084e-28
Identity = 63/99 (63.64%), Postives = 75/99 (75.76%), Query Frame = 3
Query:   36 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y K+VYVLPKHLDE V            T L+K+QADYI+V  +GPYKP HYRY
Sbjct:  380 IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGD--EYAKEVYVLPKHLDEMVARLHLGRIGANLTELSKDQADYINVPVEGPYKPDHYRY 476          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPX (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH8102) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.084e-28
Identity = 63/99 (63.64%), Postives = 76/99 (76.77%), Query Frame = 3
Query:   36 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + +  +Y K+VYVLPKHLDE V            T L+K+QADYI+V  +GPYKP HYRY
Sbjct:  380 IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGN--EYGKEVYVLPKHLDEMVARLHLDRIGAKLTELSKDQADYINVPVEGPYKPDHYRY 476          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_PROM2 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9215) GN=ahcY PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.640e-28
Identity = 64/99 (64.65%), Postives = 75/99 (75.76%), Query Frame = 3
Query:   36 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y K+VYVLPKHLDE V            T+LTKEQADYI+VS +GPYK   YRY
Sbjct:  376 IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFNKSE--QYAKEVYVLPKHLDEMVARLHLDKIGAKLTKLTKEQADYINVSVEGPYKSELYRY 472          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_POLNS (Adenosylhomocysteinase OS=Polynucleobacter necessarius (strain STIR1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.640e-28
Identity = 63/111 (56.76%), Postives = 72/111 (64.86%), Query Frame = 3
Query:   12 VFPETNS----GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            +FP  N      II+LA+GRL+NLGC TGHPS+VMS SF NQVIAQ+ELW    T KY   VY LPKHLDEKV            T LT +QA YI V+ +GPYK  HYRY
Sbjct:  371 IFPAANGMPEKRIIILAKGRLVNLGCGTGHPSYVMSSSFANQVIAQIELWNAVGTNKYPVGVYTLPKHLDEKVARLQLKKLNAQLTELTDQQAAYIGVTKEGPYKADHYRY 481          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_CHLCH (Adenosylhomocysteinase OS=Chlorobium chlorochromatii (strain CaD3) GN=ahcY PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.672e-28
Identity = 65/107 (60.75%), Postives = 76/107 (71.03%), Query Frame = 3
Query:   12 VFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            +FP  N  + +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW++    +Y   VY LPK LDE+V            TRLT EQA+YI VSADGPYKP HYRY
Sbjct:  370 IFPNGNC-MYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWQK----EYAVDVYRLPKALDEEVARLHLEQIGVRLTRLTPEQAEYIGVSADGPYKPEHYRY 471          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_BURXL (Adenosylhomocysteinase OS=Burkholderia xenovorans (strain LB400) GN=ahcY PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.672e-28
Identity = 64/107 (59.81%), Postives = 77/107 (71.96%), Query Frame = 3
Query:   12 VFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            +FP+    +I+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+ + +  KYE KVYVLPKHLDEKV            T L+ EQA YI V  +GP+KP HYRY
Sbjct:  370 IFPD-GKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFTQGN--KYENKVYVLPKHLDEKVARLHLARIGANLTVLSDEQAGYIGVDKNGPFKPNHYRY 473          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_RALPJ (Adenosylhomocysteinase OS=Ralstonia pickettii (strain 12J) GN=ahcY PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.133e-27
Identity = 64/109 (58.72%), Postives = 74/109 (67.89%), Query Frame = 3
Query:   12 VFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKE--KSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            +FP+    II+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW E  K + KY   VY LPKHLDEKV            T LT +QA YI VS +GPYK  HYRY
Sbjct:  367 IFPDGKK-IIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWTEAVKGSNKYPVGVYTLPKHLDEKVARLQLKKLNAQLTELTDQQAAYIGVSKEGPYKADHYRY 474          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_CAUCR (Adenosylhomocysteinase OS=Caulobacter crescentus GN=ahcY PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.133e-27
Identity = 64/106 (60.38%), Postives = 74/106 (69.81%), Query Frame = 3
Query:   15 FPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            FP+    +IVL+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+ELW  K+  KYE +VY LPKHLDEKV            T L K+QADYI V   GP+KP HYRY
Sbjct:  361 FPDGKK-LIVLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELWTNKA--KYENQVYTLPKHLDEKVAFLHLEKLGAKLTTLRKDQADYIGVPEAGPFKPDHYRY 463          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPW (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH7803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.479e-27
Identity = 62/99 (62.63%), Postives = 76/99 (76.77%), Query Frame = 3
Query:   36 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + +  +Y K+VYVLPKHLDE V            T L+K+QADYI+V  +GP+KP HYRY
Sbjct:  380 IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGN--EYGKEVYVLPKHLDEMVARLHLDRIGAKLTELSKDQADYINVPVEGPFKPDHYRY 476          
The following BLAST results are available for this feature:
BLAST of EY702266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
SAHH_MESSB3.893e-2861.32Adenosylhomocysteinase OS=Mesorhizobium sp. (strai... [more]
SAHH_SYNSC5.084e-2863.64Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_SYNPX5.084e-2863.64Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_PROM26.640e-2864.65Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_POLNS6.640e-2856.76Adenosylhomocysteinase OS=Polynucleobacter necessa... [more]
SAHH_CHLCH8.672e-2860.75Adenosylhomocysteinase OS=Chlorobium chlorochromat... [more]
SAHH_BURXL8.672e-2859.81Adenosylhomocysteinase OS=Burkholderia xenovorans ... [more]
SAHH_RALPJ1.133e-2758.72Adenosylhomocysteinase OS=Ralstonia pickettii (str... [more]
SAHH_CAUCR1.133e-2760.38Adenosylhomocysteinase OS=Caulobacter crescentus G... [more]
SAHH_SYNPW1.479e-2762.63Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-H10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702266 ID=EY702266; Name=EY702266; organism=Citrus sinensis; type=EST; length=893bp
CCACGCGTCCGGTCTTCCCCGAGACCAACTCAGGCATCATCGTGTTGGCT
GAGGGACGTCTCATGAACTTGGGATGTGCCACTGGGCACCCCAGCTTTGT
GATGTCCTGTTCCTTCACCAATCAGGTGATTGCCCAGCTTGAGCTCTGGA
AGGAGAAGAGCACCGGCAAGTACGAGAAGAAGGTGTATGTTCTGCCCAAG
CACCTCGATGAGAAGGTTGCTGCTCTTCACCTTGGCAAACTTGGAGCTAA
GCTCACCAGGCTCACCAAGGAGCAGGCTGACTACATCAGTGTGTCCGCCG
ATGGTCCTTACAAGCCTCTTCACTACAGGTACTAAGTGGAAGAAGAAGAA
GAAGAAGAGTGAATGTTTTGAGGGAAAGAAACAAAATATTTGGCCGGCTT
GATTGTTTTCAATGATGATCTGTAGTAGGATGTTAGGTTTAAATTTGGTA
GTAGTGTGTGTTTGGGTGGTGGGGAAAGTTTGGAGGAAAGAAACGGATTT
GTTTCACCTGATTGAAGACCATTTGGGATTTGAATAAGGTTTTGGATGGG
GCCGCGTCGGATTATGCTGTATTTGATGCAGATTTAAGTTTTGCTTGCTT
TGCTGCATCTTGGTATCCTTATTGTTTACTGATGAATGATCATAAAAAAA
AAAAAAAAATCTTTTTCTCCACTACAAACGACACCCTAAATAACTAATAT
TTACACCACCTCACGAATAATTTTCCCCTCGGGTTTCCGGAGTGCTGCCC
ACCTCCTTCTCTTCCCTGCGGGGCCTTTATTAAATAGATCAAACTAATAC
ATCGTGTGTCTCCAATTCATTAGTCTTAATAAAGTGACCTATAAATCCAT
ATTATTGCCGCTTCTTTACAACAAGCGTGGGTGAAAAACCCTC
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