EY702266

Overview
NameEY702266
Unique NameEY702266
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702266_ssr339 microsatellite EY702266_ssr339:339..356. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_NITEU (Adenosylhomocysteinase OS=Nitrosomonas europaea GN=ahcY PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.479e-27
Identity = 66/108 (61.11%), Postives = 77/108 (71.30%), Query Frame = 3
Query:   12 VFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGK-YEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            +FP T   IIVLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+    GK Y+KKVYVLPK LDE V            T LT EQA Y+++  +GPYKP  YRY
Sbjct:  375 IFP-TGRRIIVLAQGRLVNLGCATGHPSFVMSSSFTNQVLAQIELWQ---NGKDYQKKVYVLPKRLDEMVARLHLGKLGVKLTELTDEQAHYLNLDKNGPYKPEMYRY 478          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_NITEC (Adenosylhomocysteinase OS=Nitrosomonas eutropha (strain C91) GN=ahcY PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.479e-27
Identity = 66/108 (61.11%), Postives = 77/108 (71.30%), Query Frame = 3
Query:   12 VFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGK-YEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            +FP T   IIVLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+    GK Y+KKVYVLPK LDE V            T LT EQA Y+++  +GPYKP  YRY
Sbjct:  375 IFP-TGRRIIVLAQGRLVNLGCATGHPSFVMSSSFTNQVLAQMELWQ---NGKDYQKKVYVLPKQLDEMVARLHLGKLGVKLTELTDEQAHYLNLDKNGPYKPEMYRY 478          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_MYCLE (Adenosylhomocysteinase OS=Mycobacterium leprae GN=ahcY PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.479e-27
Identity = 61/106 (57.55%), Postives = 74/106 (69.81%), Query Frame = 3
Query:   15 FPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            F ++   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +     Y+ +VY LPKHLDEKV            T+LTK+QA+Y+ V  DGP+KP HYRY
Sbjct:  389 FGDSGKSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--DYDNEVYRLPKHLDEKVARVHVEALGGQLTKLTKDQAEYLGVDVDGPFKPDHYRY 492          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_MYCLB (Adenosylhomocysteinase OS=Mycobacterium leprae (strain Br4923) GN=ahcY PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.479e-27
Identity = 61/106 (57.55%), Postives = 74/106 (69.81%), Query Frame = 3
Query:   15 FPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            F ++   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +     Y+ +VY LPKHLDEKV            T+LTK+QA+Y+ V  DGP+KP HYRY
Sbjct:  389 FGDSGKSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--DYDNEVYRLPKHLDEKVARVHVEALGGQLTKLTKDQAEYLGVDVDGPFKPDHYRY 492          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_METCA (Adenosylhomocysteinase OS=Methylococcus capsulatus GN=ahcY PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.479e-27
Identity = 64/99 (64.65%), Postives = 72/99 (72.73%), Query Frame = 3
Query:   36 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            II+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+   +  KYE KVYVLPKHLDEKV            T L+ EQA YI V  +GPYKP HYRY
Sbjct:  376 IILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFCHGA--KYENKVYVLPKHLDEKVARLHLKKIGARLTELSDEQAAYIGVPKEGPYKPDHYRY 472          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_DESVM (Adenosylhomocysteinase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=ahcY PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.479e-27
Identity = 64/104 (61.54%), Postives = 73/104 (70.19%), Query Frame = 3
Query:   21 ETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            ++   IIVLAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL    +    E+KVY+LPK LDE+V            T LTKEQADYI V  DGPYKP HYRY
Sbjct:  379 KSGRSIIVLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIEL---ATNPDLERKVYILPKKLDEQVARLHLARLGVTLTTLTKEQADYIGVPVDGPYKPGHYRY 479          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_CHLP8 (Adenosylhomocysteinase OS=Chlorobaculum parvum (strain NCIB 8327) GN=ahcY PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.479e-27
Identity = 62/99 (62.63%), Postives = 70/99 (70.71%), Query Frame = 3
Query:   36 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            I +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELWK      Y+  VY LPKHLDE+V            T L+KEQADYI V  +GPYKP HYRY
Sbjct:  377 IYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWK----NNYDVDVYRLPKHLDEEVARLHLGQIGVKLTTLSKEQADYIGVPVEGPYKPEHYRY 471          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_BURPP (Adenosylhomocysteinase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=ahcY PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.523e-27
Identity = 63/107 (58.88%), Postives = 76/107 (71.03%), Query Frame = 3
Query:   12 VFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            +FP+    +I+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+ +    KYE KVYVLPKHLDEKV            T L+ +QA YI V  +GP+KP HYRY
Sbjct:  370 IFPD-GKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFTQGE--KYENKVYVLPKHLDEKVARLHLARIGANLTVLSDDQAGYIGVDKNGPFKPNHYRY 473          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_RALSO (Adenosylhomocysteinase OS=Ralstonia solanacearum GN=ahcY PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.295e-27
Identity = 64/109 (58.72%), Postives = 74/109 (67.89%), Query Frame = 3
Query:   12 VFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKE--KSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            +FP+    II+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW E  K + KY   VY LPKHLDEKV            T LT +QA YI VS +GPYK  HYRY
Sbjct:  367 IFPDGKK-IIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWTEAQKGSSKYPVGVYTLPKHLDEKVARLQLKKLNAQLTVLTDKQAAYIGVSKEGPYKADHYRY 474          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_SPHAL (Adenosylhomocysteinase OS=Sphingopyxis alaskensis GN=ahcY PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.304e-27
Identity = 61/106 (57.55%), Postives = 75/106 (70.75%), Query Frame = 3
Query:   15 FPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            FP+    II+L++GRL+NLG ATGHPSFVMS SFTNQ +AQ+ELW      +Y+  VYVLPKHLDEKV            T+LT++QADYI V  +GP+KP HYRY
Sbjct:  370 FPDGKQ-IIILSKGRLVNLGNATGHPSFVMSASFTNQTLAQIELWTRSE--QYQNDVYVLPKHLDEKVAALHLEKLGVKLTKLTQKQADYIGVPVEGPFKPDHYRY 472          
The following BLAST results are available for this feature:
BLAST of EY702266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
SAHH_NITEU1.479e-2761.11Adenosylhomocysteinase OS=Nitrosomonas europaea GN... [more]
SAHH_NITEC1.479e-2761.11Adenosylhomocysteinase OS=Nitrosomonas eutropha (s... [more]
SAHH_MYCLE1.479e-2757.55Adenosylhomocysteinase OS=Mycobacterium leprae GN=... [more]
SAHH_MYCLB1.479e-2757.55Adenosylhomocysteinase OS=Mycobacterium leprae (st... [more]
SAHH_METCA1.479e-2764.65Adenosylhomocysteinase OS=Methylococcus capsulatus... [more]
SAHH_DESVM1.479e-2761.54Adenosylhomocysteinase OS=Desulfovibrio vulgaris (... [more]
SAHH_CHLP81.479e-2762.63Adenosylhomocysteinase OS=Chlorobaculum parvum (st... [more]
SAHH_BURPP2.523e-2758.88Adenosylhomocysteinase OS=Burkholderia phytofirman... [more]
SAHH_RALSO3.295e-2758.72Adenosylhomocysteinase OS=Ralstonia solanacearum G... [more]
SAHH_SPHAL4.304e-2757.55Adenosylhomocysteinase OS=Sphingopyxis alaskensis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-H10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702266 ID=EY702266; Name=EY702266; organism=Citrus sinensis; type=EST; length=893bp
CCACGCGTCCGGTCTTCCCCGAGACCAACTCAGGCATCATCGTGTTGGCT
GAGGGACGTCTCATGAACTTGGGATGTGCCACTGGGCACCCCAGCTTTGT
GATGTCCTGTTCCTTCACCAATCAGGTGATTGCCCAGCTTGAGCTCTGGA
AGGAGAAGAGCACCGGCAAGTACGAGAAGAAGGTGTATGTTCTGCCCAAG
CACCTCGATGAGAAGGTTGCTGCTCTTCACCTTGGCAAACTTGGAGCTAA
GCTCACCAGGCTCACCAAGGAGCAGGCTGACTACATCAGTGTGTCCGCCG
ATGGTCCTTACAAGCCTCTTCACTACAGGTACTAAGTGGAAGAAGAAGAA
GAAGAAGAGTGAATGTTTTGAGGGAAAGAAACAAAATATTTGGCCGGCTT
GATTGTTTTCAATGATGATCTGTAGTAGGATGTTAGGTTTAAATTTGGTA
GTAGTGTGTGTTTGGGTGGTGGGGAAAGTTTGGAGGAAAGAAACGGATTT
GTTTCACCTGATTGAAGACCATTTGGGATTTGAATAAGGTTTTGGATGGG
GCCGCGTCGGATTATGCTGTATTTGATGCAGATTTAAGTTTTGCTTGCTT
TGCTGCATCTTGGTATCCTTATTGTTTACTGATGAATGATCATAAAAAAA
AAAAAAAAATCTTTTTCTCCACTACAAACGACACCCTAAATAACTAATAT
TTACACCACCTCACGAATAATTTTCCCCTCGGGTTTCCGGAGTGCTGCCC
ACCTCCTTCTCTTCCCTGCGGGGCCTTTATTAAATAGATCAAACTAATAC
ATCGTGTGTCTCCAATTCATTAGTCTTAATAAAGTGACCTATAAATCCAT
ATTATTGCCGCTTCTTTACAACAAGCGTGGGTGAAAAACCCTC
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