EY702266

Overview
NameEY702266
Unique NameEY702266
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702266_ssr339 microsatellite EY702266_ssr339:339..356. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_POLSQ (Adenosylhomocysteinase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.304e-27
Identity = 62/111 (55.86%), Postives = 72/111 (64.86%), Query Frame = 3
Query:   12 VFPETNSG----IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            +FP  N      II+LA+GRL+NLGC TGHPS+VMS SF NQVIAQ+ELW    T KY   VY LPKHLDEKV            T L+ +QA YI V+ +GPYK  HYRY
Sbjct:  371 IFPAANGKPEKRIIILAKGRLVNLGCGTGHPSYVMSSSFANQVIAQIELWNAVGTDKYPIGVYTLPKHLDEKVARLQLKTLNAELTVLSDQQASYIGVTKEGPYKADHYRY 481          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSJ (Adenosylhomocysteinase OS=Mycobacterium sp. (strain JLS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.304e-27
Identity = 61/99 (61.62%), Postives = 73/99 (73.74%), Query Frame = 3
Query:   36 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            I+VL+EGRL+NLG ATGHPSFVMS SF+NQVIAQ+ELW +    +Y+  VY L KHLDEKV            T+LTKEQA+YI+V  +GPYKP HYRY
Sbjct:  393 IVVLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKND--EYDNAVYRLAKHLDEKVARIHVEALGGTLTKLTKEQAEYINVDVEGPYKPEHYRY 489          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_BACTN (Adenosylhomocysteinase OS=Bacteroides thetaiotaomicron GN=ahcY PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.304e-27
Identity = 65/109 (59.63%), Postives = 77/109 (70.64%), Query Frame = 3
Query:    6 RPVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            R  FP+ +S I++LA+GRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+ +    KYE  VY LPKHLDE+V            T+LT EQA YI VS DGPYK  HYRY
Sbjct:  373 RYYFPDGHS-ILLLADGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFNK----KYEVNVYRLPKHLDEEVARLHLEKIGVKLTKLTPEQAAYIGVSVDGPYKAEHYRY 476          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPS (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain BisB5) GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.341e-27
Identity = 61/106 (57.55%), Postives = 74/106 (69.81%), Query Frame = 3
Query:   15 FPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            FP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL+     GKY+K+VYVLPK LDEKV            T L K+QADYI V  +GP+K  HYRY
Sbjct:  367 FPD-GKRMILLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELFANNKDGKYKKEVYVLPKSLDEKVARLHLAKIGVKLTELRKDQADYIGVKVEGPFKADHYRY 471          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_PROMA (Adenosylhomocysteinase OS=Prochlorococcus marinus GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.341e-27
Identity = 62/99 (62.63%), Postives = 73/99 (73.74%), Query Frame = 3
Query:   36 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+K+  +  Y+  VYVLPKHLDE V            T L+KEQADYI+V  +GPYK   YRY
Sbjct:  380 IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFKKGDS--YQNNVYVLPKHLDEMVARLHLDKIGANLTELSKEQADYINVPIEGPYKSEQYRY 476          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_DESVV (Adenosylhomocysteinase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.341e-27
Identity = 62/99 (62.63%), Postives = 72/99 (72.73%), Query Frame = 3
Query:   36 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            IIVLAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL    +    E+KVY LPK LDE+V            TRL+K+QADYI VS +GP+KP HYRY
Sbjct:  384 IIVLAEGRLVNLGCATGHPSFVMSASFTNQTLAQIEL---ATNPDLERKVYTLPKKLDEEVARLHLDRLGVKLTRLSKDQADYIGVSPEGPFKPDHYRY 479          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_DESVH (Adenosylhomocysteinase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.341e-27
Identity = 62/99 (62.63%), Postives = 72/99 (72.73%), Query Frame = 3
Query:   36 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            IIVLAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL    +    E+KVY LPK LDE+V            TRL+K+QADYI VS +GP+KP HYRY
Sbjct:  384 IIVLAEGRLVNLGCATGHPSFVMSASFTNQTLAQIEL---ATNPDLERKVYTLPKKLDEEVARLHLDRLGVKLTRLSKDQADYIGVSPEGPFKPDHYRY 479          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_COXB1 (Adenosylhomocysteinase OS=Coxiella burnetii (strain CbuK_Q154) GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.341e-27
Identity = 62/107 (57.94%), Postives = 76/107 (71.03%), Query Frame = 3
Query:   12 VFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            +FP+    ++VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+     KY   VYVLPKHLDE+V            T LT++QADYI V  +GP+K  HYRY
Sbjct:  335 IFPD-GKRLMVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPE--KYPIGVYVLPKHLDEEVARLHLERVGAKLTTLTEKQADYIGVDPEGPFKSEHYRY 438          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_BRAJA (Adenosylhomocysteinase OS=Bradyrhizobium japonicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.341e-27
Identity = 62/106 (58.49%), Postives = 74/106 (69.81%), Query Frame = 3
Query:   15 FPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            FP+ +  II+L+EGRL+NLG A GHPSFVMS SFTNQ +AQ+EL+     GKY+K+VYVLPK LDEKV            T L K+QADYI V  +GPYK  HYRY
Sbjct:  369 FPDKHR-IIMLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELFANNKDGKYKKEVYVLPKTLDEKVARLHLAKIGVKLTELRKDQADYIGVKQEGPYKSDHYRY 473          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSS (Adenosylhomocysteinase OS=Mycobacterium sp. (strain MCS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.588e-27
Identity = 60/99 (60.61%), Postives = 73/99 (73.74%), Query Frame = 3
Query:   36 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            I++L+EGRL+NLG ATGHPSFVMS SF+NQVIAQ+ELW +    +Y+  VY L KHLDEKV            T+LTKEQA+YI+V  +GPYKP HYRY
Sbjct:  393 IVLLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKND--EYDNAVYRLAKHLDEKVARIHVEALGGTLTKLTKEQAEYINVDVEGPYKPEHYRY 489          
The following BLAST results are available for this feature:
BLAST of EY702266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
SAHH_POLSQ4.304e-2755.86Adenosylhomocysteinase OS=Polynucleobacter sp. (st... [more]
SAHH_MYCSJ4.304e-2761.62Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_BACTN4.304e-2759.63Adenosylhomocysteinase OS=Bacteroides thetaiotaomi... [more]
SAHH_RHOPS7.341e-2757.55Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_PROMA7.341e-2762.63Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_DESVV7.341e-2762.63Adenosylhomocysteinase OS=Desulfovibrio vulgaris s... [more]
SAHH_DESVH7.341e-2762.63Adenosylhomocysteinase OS=Desulfovibrio vulgaris (... [more]
SAHH_COXB17.341e-2757.94Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_BRAJA7.341e-2758.49Adenosylhomocysteinase OS=Bradyrhizobium japonicum... [more]
SAHH_MYCSS9.588e-2760.61Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-H10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702266 ID=EY702266; Name=EY702266; organism=Citrus sinensis; type=EST; length=893bp
CCACGCGTCCGGTCTTCCCCGAGACCAACTCAGGCATCATCGTGTTGGCT
GAGGGACGTCTCATGAACTTGGGATGTGCCACTGGGCACCCCAGCTTTGT
GATGTCCTGTTCCTTCACCAATCAGGTGATTGCCCAGCTTGAGCTCTGGA
AGGAGAAGAGCACCGGCAAGTACGAGAAGAAGGTGTATGTTCTGCCCAAG
CACCTCGATGAGAAGGTTGCTGCTCTTCACCTTGGCAAACTTGGAGCTAA
GCTCACCAGGCTCACCAAGGAGCAGGCTGACTACATCAGTGTGTCCGCCG
ATGGTCCTTACAAGCCTCTTCACTACAGGTACTAAGTGGAAGAAGAAGAA
GAAGAAGAGTGAATGTTTTGAGGGAAAGAAACAAAATATTTGGCCGGCTT
GATTGTTTTCAATGATGATCTGTAGTAGGATGTTAGGTTTAAATTTGGTA
GTAGTGTGTGTTTGGGTGGTGGGGAAAGTTTGGAGGAAAGAAACGGATTT
GTTTCACCTGATTGAAGACCATTTGGGATTTGAATAAGGTTTTGGATGGG
GCCGCGTCGGATTATGCTGTATTTGATGCAGATTTAAGTTTTGCTTGCTT
TGCTGCATCTTGGTATCCTTATTGTTTACTGATGAATGATCATAAAAAAA
AAAAAAAAATCTTTTTCTCCACTACAAACGACACCCTAAATAACTAATAT
TTACACCACCTCACGAATAATTTTCCCCTCGGGTTTCCGGAGTGCTGCCC
ACCTCCTTCTCTTCCCTGCGGGGCCTTTATTAAATAGATCAAACTAATAC
ATCGTGTGTCTCCAATTCATTAGTCTTAATAAAGTGACCTATAAATCCAT
ATTATTGCCGCTTCTTTACAACAAGCGTGGGTGAAAAACCCTC
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