EY702266

Overview
NameEY702266
Unique NameEY702266
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702266_ssr339 microsatellite EY702266_ssr339:339..356. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSK (Adenosylhomocysteinase OS=Mycobacterium sp. (strain KMS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.588e-27
Identity = 60/99 (60.61%), Postives = 73/99 (73.74%), Query Frame = 3
Query:   36 IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            I++L+EGRL+NLG ATGHPSFVMS SF+NQVIAQ+ELW +    +Y+  VY L KHLDEKV            T+LTKEQA+YI+V  +GPYKP HYRY
Sbjct:  393 IVLLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKND--EYDNAVYRLAKHLDEKVARIHVEALGGTLTKLTKEQAEYINVDVEGPYKPEHYRY 489          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_BACFR (Adenosylhomocysteinase OS=Bacteroides fragilis GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.588e-27
Identity = 65/109 (59.63%), Postives = 77/109 (70.64%), Query Frame = 3
Query:    6 RPVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            R  FP+ +S II+LA+GRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+ +    KY+  VY LPKHLDE+V            T+LT EQA YI VS DGPYK  HYRY
Sbjct:  384 RYYFPDGHS-IILLADGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFNK----KYDINVYRLPKHLDEEVARLHLEKIGVKLTKLTPEQAAYIGVSVDGPYKADHYRY 487          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_TRIVA (Adenosylhomocysteinase OS=Trichomonas vaginalis PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.252e-26
Identity = 61/106 (57.55%), Postives = 79/106 (74.53%), Query Frame = 3
Query:   15 FPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            FP+ ++ I++LAEGRL+NLGCATGHPSFVMS SFTNQ +AQL+L++++  G  E KVY LPKHLDE+V            T+LT++QADYI+V  +GPYK   YRY
Sbjct:  384 FPDGHA-ILLLAEGRLLNLGCATGHPSFVMSMSFTNQTLAQLDLYEKR--GNLEMKVYTLPKHLDEEVVRLHLGSLDVHLTKLTQKQADYINVPVEGPYKSDAYRY 486          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_COXBU (Adenosylhomocysteinase OS=Coxiella burnetii GN=ahcY PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.252e-26
Identity = 62/107 (57.94%), Postives = 75/107 (70.09%), Query Frame = 3
Query:   12 VFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            +FP+    + VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+     KY   VYVLPKHLDE+V            T LT++QADYI V  +GP+K  HYRY
Sbjct:  335 IFPD-GKRLTVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPE--KYPIGVYVLPKHLDEEVARLHLERVGGKLTTLTEKQADYIGVDPEGPFKSEHYRY 438          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_COXBN (Adenosylhomocysteinase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=ahcY PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.252e-26
Identity = 62/107 (57.94%), Postives = 75/107 (70.09%), Query Frame = 3
Query:   12 VFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            +FP+    + VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+     KY   VYVLPKHLDE+V            T LT++QADYI V  +GP+K  HYRY
Sbjct:  335 IFPD-GKRLTVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPE--KYPIGVYVLPKHLDEEVARLHLERVGAKLTTLTEKQADYIGVDPEGPFKSEHYRY 438          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_COXB2 (Adenosylhomocysteinase OS=Coxiella burnetii (strain CbuG_Q212) GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.252e-26
Identity = 62/107 (57.94%), Postives = 75/107 (70.09%), Query Frame = 3
Query:   12 VFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            +FP+    + VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+     KY   VYVLPKHLDE+V            T LT++QADYI V  +GP+K  HYRY
Sbjct:  335 IFPD-GKRLTVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPE--KYPIGVYVLPKHLDEEVARLHLERVGGKLTTLTEKQADYIGVDPEGPFKSEHYRY 438          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_RHIE6 (Adenosylhomocysteinase OS=Rhizobium etli (strain CIAT 652) GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.635e-26
Identity = 63/106 (59.43%), Postives = 77/106 (72.64%), Query Frame = 3
Query:   15 FPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            FP+ N  II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL+ +   G+YE KVY+LPKHLDEKV            T+L++EQA YI VS  GP+K  HYRY
Sbjct:  364 FPKGNR-IILLSEGRLLNLGNATGHPSFVMSASFTNQTLAQIELFTKP--GQYENKVYILPKHLDEKVARLHLDKLGVKLTQLSEEQAAYIGVSPKGPFKSDHYRY 466          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_CHLTE (Adenosylhomocysteinase OS=Chlorobium tepidum GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.635e-26
Identity = 62/104 (59.62%), Postives = 71/104 (68.27%), Query Frame = 3
Query:   21 ETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            E  + I +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW+      Y+  VY LPK LDE+V            T LTKEQADYI V  +GPYKP HYRY
Sbjct:  372 ENGNCIYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWQ----NDYKVGVYRLPKKLDEEVARLHLGQIGAKLTTLTKEQADYIGVPVEGPYKPEHYRY 471          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_CHLL2 (Adenosylhomocysteinase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.635e-26
Identity = 60/104 (57.69%), Postives = 72/104 (69.23%), Query Frame = 3
Query:   21 ETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            E+ + I +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW    T +Y   VY LPK LDE+V            T L+KEQADY+ +  +GPYKP HYRY
Sbjct:  372 ESGNSIYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELW----TKEYSIDVYRLPKELDEEVARLHLGQLGVKLTTLSKEQADYLGIPVEGPYKPDHYRY 471          
BLAST of EY702266 vs. ExPASy Swiss-Prot
Match: SAHH_SOLUE (Adenosylhomocysteinase OS=Solibacter usitatus (strain Ellin6076) GN=ahcY PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.136e-26
Identity = 60/101 (59.41%), Postives = 69/101 (68.32%), Query Frame = 3
Query:   30 SGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 332
            S I +LAEGRL+NLGCATGHPSFVMS SF NQ +AQL+LWK K T  Y+  VY LPK LDE+V            T LT  QA+Y+ V  +GPYKP HYRY
Sbjct:  377 SSIFILAEGRLVNLGCATGHPSFVMSNSFANQTLAQLDLWKNKDT--YKVGVYTLPKKLDEEVARLHLEKIGVKLTTLTPAQAEYLGVPVEGPYKPDHYRY 475          
The following BLAST results are available for this feature:
BLAST of EY702266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
SAHH_MYCSK9.588e-2760.61Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_BACFR9.588e-2759.63Adenosylhomocysteinase OS=Bacteroides fragilis GN=... [more]
SAHH_TRIVA1.252e-2657.55Adenosylhomocysteinase OS=Trichomonas vaginalis PE... [more]
SAHH_COXBU1.252e-2657.94Adenosylhomocysteinase OS=Coxiella burnetii GN=ahc... [more]
SAHH_COXBN1.252e-2657.94Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_COXB21.252e-2657.94Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_RHIE61.635e-2659.43Adenosylhomocysteinase OS=Rhizobium etli (strain C... [more]
SAHH_CHLTE1.635e-2659.62Adenosylhomocysteinase OS=Chlorobium tepidum GN=ah... [more]
SAHH_CHLL21.635e-2657.69Adenosylhomocysteinase OS=Chlorobium limicola (str... [more]
SAHH_SOLUE2.136e-2659.41Adenosylhomocysteinase OS=Solibacter usitatus (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-H10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702266 ID=EY702266; Name=EY702266; organism=Citrus sinensis; type=EST; length=893bp
CCACGCGTCCGGTCTTCCCCGAGACCAACTCAGGCATCATCGTGTTGGCT
GAGGGACGTCTCATGAACTTGGGATGTGCCACTGGGCACCCCAGCTTTGT
GATGTCCTGTTCCTTCACCAATCAGGTGATTGCCCAGCTTGAGCTCTGGA
AGGAGAAGAGCACCGGCAAGTACGAGAAGAAGGTGTATGTTCTGCCCAAG
CACCTCGATGAGAAGGTTGCTGCTCTTCACCTTGGCAAACTTGGAGCTAA
GCTCACCAGGCTCACCAAGGAGCAGGCTGACTACATCAGTGTGTCCGCCG
ATGGTCCTTACAAGCCTCTTCACTACAGGTACTAAGTGGAAGAAGAAGAA
GAAGAAGAGTGAATGTTTTGAGGGAAAGAAACAAAATATTTGGCCGGCTT
GATTGTTTTCAATGATGATCTGTAGTAGGATGTTAGGTTTAAATTTGGTA
GTAGTGTGTGTTTGGGTGGTGGGGAAAGTTTGGAGGAAAGAAACGGATTT
GTTTCACCTGATTGAAGACCATTTGGGATTTGAATAAGGTTTTGGATGGG
GCCGCGTCGGATTATGCTGTATTTGATGCAGATTTAAGTTTTGCTTGCTT
TGCTGCATCTTGGTATCCTTATTGTTTACTGATGAATGATCATAAAAAAA
AAAAAAAAATCTTTTTCTCCACTACAAACGACACCCTAAATAACTAATAT
TTACACCACCTCACGAATAATTTTCCCCTCGGGTTTCCGGAGTGCTGCCC
ACCTCCTTCTCTTCCCTGCGGGGCCTTTATTAAATAGATCAAACTAATAC
ATCGTGTGTCTCCAATTCATTAGTCTTAATAAAGTGACCTATAAATCCAT
ATTATTGCCGCTTCTTTACAACAAGCGTGGGTGAAAAACCCTC
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