EY702246

Overview
NameEY702246
Unique NameEY702246
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702246 vs. ExPASy Swiss-Prot
Match: GL34_ORYSJ (Putative germin-like protein 3-4 OS=Oryza sativa subsp. japonica GN=Os03g0693800 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.137e-27
Identity = 74/200 (37.00%), Postives = 108/200 (54.00%), Query Frame = 3
Query:   96 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFCVSTMFDSLPIQHWKNKCSCLFCSKQPIPG*SYIADTVFGANPSNHPHFLGKAFQLDPKIVKDLQNKF 689
            TD   LQD CVA  D K  V VNG  CK P  A  ++F FS     G    AN  G + T+ +V + PG+NTLG+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +  + N   +KV+  G+ F +            K + + +       PG  ++  T+FG+NP      L KA ++D  +V+ L++KF
Sbjct:   29 TDADPLQDFCVADLDSK--VTVNGHACK-PASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDMGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDTGVVELLKSKF 225          
BLAST of EY702246 vs. ExPASy Swiss-Prot
Match: GL36_ORYSJ (Germin-like protein 3-6 OS=Oryza sativa subsp. japonica GN=Os03g0694000 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.217e-27
Identity = 74/200 (37.00%), Postives = 107/200 (53.50%), Query Frame = 3
Query:   96 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFCVSTMFDSLPIQHWKNKCSCLFCSKQPIPG*SYIADTVFGANPSNHPHFLGKAFQLDPKIVKDLQNKF 689
            TD   LQD CVA  D K  V VNG  CK P  A  ++F FS     G    AN  G + T+ +V + PG+NTLG+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +    N   +KV+  G+ F +            K + + +       PG  ++  T+FG+NP      L KA ++D  +V+ L++KF
Sbjct:   29 TDADPLQDFCVADLDSK--VTVNGHACK-PASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKF 225          
BLAST of EY702246 vs. ExPASy Swiss-Prot
Match: GL35_ORYSJ (Germin-like protein 3-5 OS=Oryza sativa subsp. japonica GN=Os03g0693900 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.053e-26
Identity = 73/200 (36.50%), Postives = 106/200 (53.00%), Query Frame = 3
Query:   96 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFCVSTMFDSLPIQHWKNKCSCLFCSKQPIPG*SYIADTVFGANPSNHPHFLGKAFQLDPKIVKDLQNKF 689
            TD   LQD CVA  D    V VNG  CK P  A  ++F FS     G    AN  G + T+ +V + PG+NTLG+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +    N   +KV+  G+ F +            K + + +       PG  ++  T+FG+NP      L KA ++D  +V+ L++KF
Sbjct:   27 TDADPLQDFCVA--DLNSEVTVNGHACK-PASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKF 223          
BLAST of EY702246 vs. ExPASy Swiss-Prot
Match: GL38_ORYSJ (Germin-like protein 3-8 OS=Oryza sativa subsp. japonica GN=Os03g0804700 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.738e-25
Identity = 74/204 (36.27%), Postives = 103/204 (50.49%), Query Frame = 3
Query:   99 DPGHLQDVCVAINDPKDGVFVN-------GKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFCVSTMFDSLPIQHWKNKCSCLFCSKQPIPG*SYIADTVFGANPSNHPHFLGKAFQLDPKIVKDLQNKF 689
            DP  +QD CVA+  P+ G           G  CK      ++DFFF+GL    +T NR G + T AN E  PGLNTLG+S  R+D AP G  P H HPRA+E+  V+ G +  GFV++        +KVL +G+ F V                  +      +PG      T+FG++P      L K+FQ+D KI+K L++KF
Sbjct:   26 DPEPVQDFCVAVV-PRAGDAAAAACPAYPGFPCKPASTVVSDDFFFAGLAVASDTDNRFGFNVTAANAETFPGLNTLGVSIGRVDLAPGGVNPLHSHPRATELIHVVAGRVLAGFVST---AGEFYSKVLGEGETFVVPRGMIHFQYNVGGVAAQVITAFNSQMPGVVAAGSTLFGSDPEIPDAVLAKSFQVDAKIIKLLKSKF 225          
BLAST of EY702246 vs. ExPASy Swiss-Prot
Match: GL33_ORYSJ (Germin-like protein 3-3 OS=Oryza sativa subsp. japonica GN=Os03g0693700 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.965e-25
Identity = 73/198 (36.87%), Postives = 104/198 (52.53%), Query Frame = 3
Query:   99 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNT-ANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFCVSTMFDSLPIQHWKNKCSCLFCSKQPIPG*SYIADTVFGANPSNHPHFLGKAFQLDPKIVKDLQNKF 689
            DP  LQD CVA  D +  V +NG  CK    A  E  F S L   G+  AN  G + T  +V   PG+NTLG+S  RID+AP G  PPH+HPRA+E+ +VL G L VG + S    N   ++V+  G+ F +            K + + +       PG  ++  T+FG+NP      L KA ++D  +V+ L++KF
Sbjct:   28 DPDPLQDFCVADLDSE--VTLNGYPCKPTPAAGDEFLFSSRLATGGDVNANPNGSNVTQLDVAGWPGVNTLGVSMNRIDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGSLDTGNRYYSRVVRGGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKF 223          
BLAST of EY702246 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.057e-25
Identity = 69/201 (34.33%), Postives = 102/201 (50.75%), Query Frame = 3
Query:   99 DPGHLQDVCVAINDPKDGVFVNGKF----CKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFCVSTMFDSLPIQHWKNKCSCLFCSKQPIPG*SYIADTVFGANPSNHPHFLGKAFQLDPKIVKDLQNKF 689
            DP  +QD CVA+  P+ G   +  +    CK      ++DFFF+GL   G+T N  G      NVE  P LNTLG++  R+D AP G  P H HPRA+E+  V+ G + VGFV++        +KV+ +G+ F +                  +      +PG    A  +FGA+P      L K+FQ+D +I+K L++KF
Sbjct:   36 DPEPIQDFCVAV--PRAGGEASPAYPGFPCKPASAVVSDDFFFAGLAAAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAELVHVITGRMLVGFVST---AGKYYSKVVGEGETFAIPRGLMHFQYNPGNASARAMTVFNSQLPGVVPAATALFGADPEIPDAVLAKSFQVDAEIIKLLKSKF 231          
BLAST of EY702246 vs. ExPASy Swiss-Prot
Match: AB19B_PRUPE (Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.758e-25
Identity = 59/129 (45.74%), Postives = 69/129 (53.49%), Query Frame = 3
Query:   96 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDV 482
            T    +QD CVA     DG    G  CK P +    DF +SGLG  GNT N      T A   Q PG+N LGIS  R+D  P G  P H HP ASE+ LV++GT+  GFV SD   NT   K L KGD+
Sbjct:   15 TSHASVQDFCVADYKAPDGPA--GYSCKKPAIVTVNDFVYSGLGIAGNTTNIFKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVVPFHTHPGASEVLLVVQGTIIAGFVASD---NTPYLKTLKKGDI 138          

HSP 2 Score: 34.6538 bits (78), Expect = 5.758e-25
Identity = 16/30 (53.33%), Postives = 20/30 (66.67%), Query Frame = 1
Query:  487 VFPQCLIHFQFNIGKTNAAAYSALNSQFPG 576
            VFPQ L+HFQ N G T A A+ + +S  PG
Sbjct:  140 VFPQGLLHFQVNGGDTPAIAFPSFSSPSPG 169          
BLAST of EY702246 vs. ExPASy Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 7.487e-25
Identity = 53/132 (40.15%), Postives = 77/132 (58.33%), Query Frame = 3
Query:   96 TDPGHLQDVCVAINDPK-DGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANR-LGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVF 485
            +DP  LQD CV+        +F+NGK CKDP  A   DF  S L +PGNT  +   ++ T      +PGLNT+G++  R+D+   G  PPH+HPRASE+ + L+G L VGFV +   +  +  + L+ G+ F
Sbjct:   18 SDPDPLQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRPGNTKTKPFMINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVLLVGFVDT---SGRVFTQELHPGETF 146          

HSP 2 Score: 34.2686 bits (77), Expect = 7.487e-25
Identity = 18/32 (56.25%), Postives = 23/32 (71.88%), Query Frame = 1
Query:  484 FVFPQCLIHFQFNIGKTNAA-AYSALNSQFPG 576
            FVFP+ LIHF +NI   ++A A S L+SQ PG
Sbjct:  146 FVFPKGLIHFLYNIDTVSSALAVSGLSSQNPG 177          
BLAST of EY702246 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.798e-24
Identity = 58/124 (46.77%), Postives = 68/124 (54.84%), Query Frame = 3
Query:  111 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDV 482
            +QD CVA     DG    G  CK P      DF +SGLG  GNT N +    T A   Q PG+N LGIS  R+D  P G  P H HP ASE+ LV++GT+  GFV SD   NT   K L KGD+
Sbjct:   20 VQDFCVADYKAPDGPA--GYSCKKPAKVTINDFVYSGLGIAGNTTNIIKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAGFVASD---NTPYLKTLKKGDI 138          

HSP 2 Score: 34.2686 bits (77), Expect = 2.798e-24
Identity = 16/30 (53.33%), Postives = 20/30 (66.67%), Query Frame = 1
Query:  487 VFPQCLIHFQFNIGKTNAAAYSALNSQFPG 576
            VFPQ L+HFQ N G T A A+ + +S  PG
Sbjct:  140 VFPQGLLHFQVNGGGTPALAFPSFSSPSPG 169          
BLAST of EY702246 vs. ExPASy Swiss-Prot
Match: ABP20_PRUPE (Auxin-binding protein ABP20 OS=Prunus persica GN=ABP20 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.896e-23
Identity = 57/124 (45.97%), Postives = 70/124 (56.45%), Query Frame = 3
Query:  111 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDV 482
            +QD CVA     +G    G  CK P   +  DF FSGLG  GNT+N +    T A V Q PG+N LGIS  R+D A  G  P H HP ASE+ +V +GT+  GFV SD   NT   + L KGD+
Sbjct:   25 VQDFCVADLAAPEGPA--GFSCKKPASVKVNDFVFSGLGIAGNTSNIIKAAVTPAFVAQFPGVNGLGISIARLDLAVGGVVPFHTHPGASEVLIVAQGTICAGFVASD---NTPYLQTLEKGDI 143          

HSP 2 Score: 33.8834 bits (76), Expect = 3.896e-23
Identity = 15/30 (50.00%), Postives = 20/30 (66.67%), Query Frame = 1
Query:  487 VFPQCLIHFQFNIGKTNAAAYSALNSQFPG 576
            VFPQ L+HFQ N G+  A A+++  S  PG
Sbjct:  145 VFPQGLLHFQVNGGEAPALAFASFGSASPG 174          
The following BLAST results are available for this feature:
BLAST of EY702246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
GL34_ORYSJ4.137e-2737.00Putative germin-like protein 3-4 OS=Oryza sativa s... [more]
GL36_ORYSJ9.217e-2737.00Germin-like protein 3-6 OS=Oryza sativa subsp. jap... [more]
GL35_ORYSJ2.053e-2636.50Germin-like protein 3-5 OS=Oryza sativa subsp. jap... [more]
GL38_ORYSJ1.738e-2536.27Germin-like protein 3-8 OS=Oryza sativa subsp. jap... [more]
GL33_ORYSJ2.965e-2536.87Germin-like protein 3-3 OS=Oryza sativa subsp. jap... [more]
GL37_ORYSJ5.057e-2534.33Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]
AB19B_PRUPE5.758e-2545.74Auxin-binding protein ABP19b OS=Prunus persica GN=... [more]
GL11_ARATH7.487e-2540.15Germin-like protein subfamily 1 member 1 OS=Arabid... [more]
AB19A_PRUPE2.798e-2446.77Auxin-binding protein ABP19a OS=Prunus persica GN=... [more]
ABP20_PRUPE3.896e-2345.97Auxin-binding protein ABP20 OS=Prunus persica GN=A... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-F10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702246 ID=EY702246; Name=EY702246; organism=Citrus sinensis; type=EST; length=873bp
AGATAGGCATATCCTGTGACTTAATCACCATGAAGGTAATTCAATTTCTT
ATAGGTTTTGCCCTCTTGGCTTTGGCTTCTTCTTTGGCCTCTGCCACTGA
CCCTGGCCATCTTCAAGATGTCTGTGTAGCCATCAATGACCCCAAGGATG
GTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTTGCGAGAGCA
GAAGATTTCTTCTTCTCAGGGCTAGGCAAGCCTGGAAACACAGCAAATCG
ACTTGGTGTTGATGAAACAGATGCAAATGTTGAGCAAATTCCAGGACTCA
ACACCCTTGGCATATCAGCATTCCGTATTGACTATGCACCATATGGCCAA
AGGCCACCTCACATTCACCCCCGTGCCAGCGAAATCTTCTTAGTCCTGGA
AGGAACTCTTTATGTCGGTTTTGTGACATCAGACCAACTGAATAACACAC
TCATCGCAAAAGTTCTAAATAAGGGAGATGTTTTTTGTGTTTCCACAATG
TTTGATTCACTTCCAATTCAACATTGGAAAAACAAATGCAGCTGCCTATT
CTGCTCTAAACAGCCAATTCCCGGGTGAAGTTACATAGCCGACACAGTCT
TTGGAGCCAATCCTTCCAATCATCCCCATTTTCTTGGCAAGGCATTCCAG
TTGGACCCAAAGATAGTGAAAGATCTTCAAAATAAGTTCCTTTAATGGCA
TTTAGGAGAAAGAATTAATGAGCTTTTATATTAATGGCCTCCTCCCTAAC
GGCCTGATTACTTAATCTCCAGATTAACATATCTTAATAATTGAAATAAA
GAGGGCTCTCATGAACCTCTCCCCAAGTTAACTGTGGCCATGGAATAAAC
AAAATTGGTTTTGGTTTTATTAA
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