EY702246

Overview
NameEY702246
Unique NameEY702246
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702246 vs. ExPASy Swiss-Prot
Match: GLT3_ARATH (Germin-like protein subfamily T member 3 OS=Arabidopsis thaliana GN=At1g74820 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.182e-23
Identity = 69/192 (35.94%), Postives = 98/192 (51.04%), Query Frame = 3
Query:  114 QDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFCVSTMFDSLPIQHWKNKCSCLFCSKQPIPG*SYIADTVFGANPSNHPHFLGKAFQLDPKIVKDLQNKF 689
            QD CVA  D +     +G  CK      +EDFF+SGL  P NT+N  G+    AN+   PGLNTLGIS + +  AP G   PH HP  +E  +V+EG++ VGF+T+   N TL +KV+  GD+F +            K +C  L      +P    +  T+    P+     L  AF+ D K +  L++KF
Sbjct:   41 QDFCVA--DLQATPTNSGYPCKSQ--VTSEDFFYSGLNTPLNTSNPKGIAANPANLLTFPGLNTLGISMYNVAIAPGGYNQPHSHPGVTEAGVVIEGSVLVGFLTT---NYTLYSKVIGPGDMFVIPPGLIHYEGNVGKTQCRLLTVVADDLPSEVGVPHTLLATKPAIPNEVLISAFKADSKTINMLRSKF 225          
BLAST of EY702246 vs. ExPASy Swiss-Prot
Match: GL33_ARATH (Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana GN=GER3 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 8.587e-23
Identity = 52/123 (42.28%), Postives = 70/123 (56.91%), Query Frame = 3
Query:  111 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGD 479
            +QD CVA  DPK     +G  CK+P      DF F+GLG  GNT+N +    T A      G+N LG+S  R+D A  G  P H HP ASE+ +V++GT+  GF++S    N +  K LN+GD
Sbjct:   22 VQDFCVA--DPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGNTSNIIKAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISS---ANKVYLKTLNRGD 139          

HSP 2 Score: 36.1946 bits (82), Expect = 8.587e-23
Identity = 17/30 (56.67%), Postives = 19/30 (63.33%), Query Frame = 1
Query:  487 VFPQCLIHFQFNIGKTNAAAYSALNSQFPG 576
            VFPQ L+HFQ N GK  A A+ A  S  PG
Sbjct:  142 VFPQGLLHFQLNSGKGPALAFVAFGSSSPG 171          
BLAST of EY702246 vs. ExPASy Swiss-Prot
Match: GLP1_SINAL (Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.117e-22
Identity = 53/123 (43.09%), Postives = 70/123 (56.91%), Query Frame = 3
Query:  111 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGD 479
            +QD CVA  DPK     +G  CK+P      DF FSGLGK GNT+N +    T A      GLN L +S  R+D A  G  P H HP ASE+ +V++GT+  GF++S    N +  K L++GD
Sbjct:   22 VQDFCVA--DPKGPQNPSGYSCKNPDQVTENDFAFSGLGKAGNTSNVIKAAVTPAFAPAFAGLNGLDVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISS---ANKVYLKTLSRGD 139          

HSP 2 Score: 36.1946 bits (82), Expect = 1.117e-22
Identity = 17/30 (56.67%), Postives = 19/30 (63.33%), Query Frame = 1
Query:  487 VFPQCLIHFQFNIGKTNAAAYSALNSQFPG 576
            VFPQ L+HFQ N GK  A A+ A  S  PG
Sbjct:  142 VFPQGLLHFQLNSGKGPALAFVAFGSSSPG 171          
BLAST of EY702246 vs. ExPASy Swiss-Prot
Match: GL12_ORYSJ (Germin-like protein 1-2 OS=Oryza sativa subsp. japonica GN=Os01g0705100 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.377e-22
Identity = 69/197 (35.03%), Postives = 96/197 (48.73%), Query Frame = 3
Query:   99 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFCVSTMFDSLPIQHWKNKCSCLFCSKQPIPG*SYIADTVFGANPSNHPHFLGKAFQLDPKIVKDLQNKF 689
            D   LQD+CVA  D +    V+G  CK      ++DFF   + +  +T+N  GV+ T A V   PGLNTLG+S  R D AP G  PPH HPRASE+ LVL G + VGF T+    N L +KV+ + ++F V        +       S +       PG       +F   P+     L K F +    V  +++KF
Sbjct:   30 DSPPLQDICVA--DLRAATAVDGFPCKPTASVVSDDFFCDAIVQAPSTSNPFGVNSTRATVSAFPGLNTLGLSITRTDLAPGGLNPPHSHPRASELVLVLSGEVMVGFTTA---ANRLFSKVVREKELFVVPRGLQHFQLNVGAGNASFVAMFDSQSPGLVTPTFALFATQPAMPMEVLAKTFLMGEDEVGAIKSKF 221          
BLAST of EY702246 vs. ExPASy Swiss-Prot
Match: GL34_ARATH (Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana GN=At5g61750 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.194e-21
Identity = 51/129 (39.53%), Postives = 71/129 (55.04%), Query Frame = 3
Query:   99 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVF 485
            D  ++QD C      +   F+NG  CK+P    A+DF  + L + G+T N L  + T     + PGLNTLG+S  R D    G  P H HPR+SE+  V++G ++ GFV +   NN +   VL KGDVF
Sbjct:   19 DSDNMQDTCPTAPGEQSIFFINGYPCKNPTKITAQDFKSTKLTEAGDTDNYLQSNVTLLTALEFPGLNTLGLSVSRTDLERDGSVPFHSHPRSSEMLFVVKGVVFAGFVDT---NNKIFQTVLQKGDVF 144          

HSP 2 Score: 33.113 bits (74), Expect = 1.194e-21
Identity = 17/33 (51.52%), Postives = 21/33 (63.64%), Query Frame = 1
Query:  484 FVFPQCLIHFQFNIGKTNAAAYSALNSQFPGEV 582
            FVFP+ L+HF  + G   A A+S  NSQ PG V
Sbjct:  144 FVFPKGLLHFCLSGGFEPATAFSFYNSQNPGVV 176          
BLAST of EY702246 vs. ExPASy Swiss-Prot
Match: GL813_ORYSJ (Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 9.782e-21
Identity = 47/124 (37.90%), Postives = 63/124 (50.81%), Query Frame = 3
Query:  114 QDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVF 485
            QD CVA N P      +G  C+      A DF+   L +PG            A V+Q P +N LGISA R+D  P G  P H HP  SE+  VL+G L  GF++S   +N +  K ++KG +F
Sbjct:   29 QDFCVA-NLPLGADTPSGYQCRPAATVTAADFYSGALARPGILIRPFNTSLASAFVQQYPAVNGLGISASRVDILPGGVVPLHTHPAGSELLYVLDGALVAGFISSS--DNKVYYKEVSKGGMF 149          

HSP 2 Score: 42.3578 bits (98), Expect = 9.782e-21
Identity = 18/31 (58.06%), Postives = 23/31 (74.19%), Query Frame = 1
Query:  484 FVFPQCLIHFQFNIGKTNAAAYSALNSQFPG 576
            FVFPQ L+HFQ+N G T A A++A +S  PG
Sbjct:  149 FVFPQGLLHFQYNTGDTTAVAFAAYSSSNPG 179          
BLAST of EY702246 vs. ExPASy Swiss-Prot
Match: GL111_ORYSJ (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica GN=Os11g0537300 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.642e-20
Identity = 51/130 (39.23%), Postives = 63/130 (48.46%), Query Frame = 3
Query:   96 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVF 485
            +D   LQDVC      +  +F+NG FCK P    A DF    L   G+  N +          + PGLNTLGIS  R D A  G   PH HPRASE+  V  G++  GF  +      L  K L +GDVF
Sbjct:   23 SDSPPLQDVCPMAPQGERKLFMNGFFCKSPSTIMASDFKTLLLNHAGDLDNMVRSSANIITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGFFDT---KGKLFQKTLAEGDVF 149          

HSP 2 Score: 36.5798 bits (83), Expect = 3.642e-20
Identity = 17/33 (51.52%), Postives = 21/33 (63.64%), Query Frame = 1
Query:  484 FVFPQCLIHFQFNIGKTNAAAYSALNSQFPGEV 582
            F+FP+ L+HF  N G   A  +S LNSQ PG V
Sbjct:  149 FIFPRGLVHFIMNYGFGLATTFSVLNSQNPGVV 181          
BLAST of EY702246 vs. ExPASy Swiss-Prot
Match: GL31_ARATH (Germin-like protein subfamily 3 member 1 OS=Arabidopsis thaliana GN=GLP1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.416e-19
Identity = 71/190 (37.37%), Postives = 87/190 (45.79%), Query Frame = 3
Query:  111 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFCVSTMFDSLPIQHWKNKCSCLFCSKQPIPG*SYIADTVFGANPSNHPHFLGKAFQLDPKIVKDLQ 680
            +QD CVA  + K      G  C  P   +A DF FSGLG PGNT N +    T A   Q PGLN LG+S  R+D AP G  P H HP ASE+  VL G++  GFV+S    N +  + L  G V           I   K+  S +       PG   I D    AN       +G  F LD   VK L+
Sbjct:   19 VQDFCVA--NLKRAETPAGYPCIRPIHVKATDFVFSGLGTPGNTTNIINAAVTPAFAAQFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITAGFVSS---ANAVYVQTLKPGQVMVFPQGLLHFQINAGKSSASAVVTFNSANPG-LQILDFALFANSLPTELVVGTTF-LDATTVKKLK 201          
BLAST of EY702246 vs. ExPASy Swiss-Prot
Match: GL32_ARATH (Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.988e-18
Identity = 67/201 (33.33%), Postives = 91/201 (45.27%), Query Frame = 3
Query:   96 TDPGHLQDVCVA--INDP-KDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFCVSTMFDSLPIQHWKNKCSCLFCSKQPIPG*SYIADTVFGANPSNHPHFLGKAFQLDPKIVKDLQNKF 689
            +DP  +QD C+   +  P  D  F     CK+      EDF FSGL   GN     G        E  PGLNTLGIS  R D  P    PPH HPRA+E+  +++G +Y GFV S   NN + AKV+ +G++           +       + +       PG   I   VFG+  +     L KAF L  K +  L+ +F
Sbjct:   25 SDPDPIQDFCIPKPVTSPYHDHHFSTNLPCKNSSEVTTEDFVFSGLKTAGNFTET-GFATVPVGPENFPGLNTLGISFVRADLKPGSINPPHYHPRATEVAHLVKGRVYSGFVDS---NNKVYAKVMEEGEMMVYPKGLVHFQMNVGDVTATIVGGLNSQNPGIQKIPSVVFGSGINE--ELLMKAFGLSLKQIGTLKKRF 219          
BLAST of EY702246 vs. ExPASy Swiss-Prot
Match: GLP1_IPONI (Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.021e-17
Identity = 54/124 (43.55%), Postives = 68/124 (54.84%), Query Frame = 3
Query:  111 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDV 482
            + D CVA N P      +G  CK+     A DF +SGL KPGNT N +    T A V Q PG+  LG++  R+D AP G  P H HP ASEI  V+EGT+   F++S    N +  K L  GDV
Sbjct:   24 VNDFCVA-NGPGARDTPSGFVCKNTAKVTAADFVYSGLAKPGNTTNIINAAVTPAFVGQFPGVIGLGVTLARLDLAPGGVIPMHTHPGASEILNVVEGTILAAFISS---GNKVYEKALYPGDV 143          
The following BLAST results are available for this feature:
BLAST of EY702246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
GLT3_ARATH6.182e-2335.94Germin-like protein subfamily T member 3 OS=Arabid... [more]
GL33_ARATH8.587e-2342.28Germin-like protein subfamily 3 member 3 OS=Arabid... [more]
GLP1_SINAL1.117e-2243.09Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2... [more]
GL12_ORYSJ1.377e-2235.03Germin-like protein 1-2 OS=Oryza sativa subsp. jap... [more]
GL34_ARATH1.194e-2139.53Germin-like protein subfamily 3 member 4 OS=Arabid... [more]
GL813_ORYSJ9.782e-2137.90Germin-like protein 8-13 OS=Oryza sativa subsp. ja... [more]
GL111_ORYSJ3.642e-2039.23Germin-like protein 11-1 OS=Oryza sativa subsp. ja... [more]
GL31_ARATH5.416e-1937.37Germin-like protein subfamily 3 member 1 OS=Arabid... [more]
GL32_ARATH5.988e-1833.33Germin-like protein subfamily 3 member 2 OS=Arabid... [more]
GLP1_IPONI1.021e-1743.55Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-F10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702246 ID=EY702246; Name=EY702246; organism=Citrus sinensis; type=EST; length=873bp
AGATAGGCATATCCTGTGACTTAATCACCATGAAGGTAATTCAATTTCTT
ATAGGTTTTGCCCTCTTGGCTTTGGCTTCTTCTTTGGCCTCTGCCACTGA
CCCTGGCCATCTTCAAGATGTCTGTGTAGCCATCAATGACCCCAAGGATG
GTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTTGCGAGAGCA
GAAGATTTCTTCTTCTCAGGGCTAGGCAAGCCTGGAAACACAGCAAATCG
ACTTGGTGTTGATGAAACAGATGCAAATGTTGAGCAAATTCCAGGACTCA
ACACCCTTGGCATATCAGCATTCCGTATTGACTATGCACCATATGGCCAA
AGGCCACCTCACATTCACCCCCGTGCCAGCGAAATCTTCTTAGTCCTGGA
AGGAACTCTTTATGTCGGTTTTGTGACATCAGACCAACTGAATAACACAC
TCATCGCAAAAGTTCTAAATAAGGGAGATGTTTTTTGTGTTTCCACAATG
TTTGATTCACTTCCAATTCAACATTGGAAAAACAAATGCAGCTGCCTATT
CTGCTCTAAACAGCCAATTCCCGGGTGAAGTTACATAGCCGACACAGTCT
TTGGAGCCAATCCTTCCAATCATCCCCATTTTCTTGGCAAGGCATTCCAG
TTGGACCCAAAGATAGTGAAAGATCTTCAAAATAAGTTCCTTTAATGGCA
TTTAGGAGAAAGAATTAATGAGCTTTTATATTAATGGCCTCCTCCCTAAC
GGCCTGATTACTTAATCTCCAGATTAACATATCTTAATAATTGAAATAAA
GAGGGCTCTCATGAACCTCTCCCCAAGTTAACTGTGGCCATGGAATAAAC
AAAATTGGTTTTGGTTTTATTAA
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