EY702240

Overview
NameEY702240
Unique NameEY702240
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702240 vs. ExPASy Swiss-Prot
Match: CIPK4_ORYSJ (CBL-interacting protein kinase 4 OS=Oryza sativa subsp. japonica GN=CIPK4 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.077e-17
Identity = 45/140 (32.14%), Postives = 70/140 (50.00%), Query Frame = 1
Query:   19 GDTGSVHLVELQGAGELYAMKAMEKS-VMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 435
            G    V+L      GE  A+K ++K+ VM       R   E   M  L HP +  L+    T   I L+ +   GG+L + L   P +   E +AR    ++V  L Y H  G+ +RD+KP+N+LL  DG++ ++DF L+
Sbjct:   34 GTFAKVYLARAVAGGEAVAVKVIDKAEVMGTAGMAPRVLREVAAMRRLRHPHVLRLHEVLATRARIYLVMELATGGDLLSRLAALPRRRLPESAARRVFVQLVDALSYCHARGVAHRDVKPQNVLLDGDGNLKVSDFGLA 173          

HSP 2 Score: 34.6538 bits (78), Expect = 1.077e-17
Identity = 24/91 (26.37%), Postives = 43/91 (47.25%), Query Frame = 3
Query:  555 CWNRKYIAPEIITGAGHSSA-IDWWAXGILLYEMLYGRTPFRGKNRQKTFANILHKDLTFPSSIPVSLAAKQLINGVV--NRDSRDPLGSI 818
            C    Y APE++    +  A  D W+ G++L+ +L G  PF   N          ++   P    VS  A++L++ ++  N D+R  + S+
Sbjct:  189 CGTPAYAAPEVLRRRAYDGAKADAWSCGVILFVLLAGHLPFDDSNIADMCRKAHRREYELPRW--VSQPARRLVSRLLDPNPDTRVAVESL 277          
BLAST of EY702240 vs. ExPASy Swiss-Prot
Match: KPSH1_MOUSE (Serine/threonine-protein kinase H1 OS=Mus musculus GN=Pskh1 PE=2 SV=3)

HSP 1 Score: 60.8474 bits (146), Expect = 1.079e-17
Identity = 43/142 (30.28%), Postives = 66/142 (46.48%), Query Frame = 1
Query:   19 GDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQ---KDGHVVLTDFDLS 435
            G    V  VE +   + YA+K +E      R        E  ++  + H  +  L   F+T   + ++ +   GGELF  +  +    F E  A      V+ G+ YLH LGI +RDLKPEN+L      D  +++TDF L+
Sbjct:  107 GSFSRVVRVEHRATRQPYAIKMIETKYREGREVCES---ELRVLRRVRHANIIQLVEVFETQERVYMVMELATGGELFDRIIAKGS--FTERDATRVLQMVLDGVRYLHALGITHRDLKPENLLYYHPGTDSKIIITDFGLA 243          

HSP 2 Score: 50.447 bits (119), Expect = 1.079e-17
Identity = 28/89 (31.46%), Postives = 47/89 (52.81%), Query Frame = 3
Query:  543 VKFICWNRKYIAPEIITGAGHSSAIDWWAXGILLYEMLYGRTPFRGKNRQKTFANILHKDLTF-----PSSIPVSLAAKQLINGVVNRD 794
            +K  C   +YIAPE++    +++++D WA G++ Y +L G  PF   NR + +  IL    ++     PS   VS  AK  I+ ++  D
Sbjct:  254 MKTTCGTPEYIAPEVLVRKPYTNSVDMWALGVIAYILLSGTMPFEDDNRTRLYRQILRGKYSYLGEPWPS---VSNLAKDFIDRLLTVD 339          
BLAST of EY702240 vs. ExPASy Swiss-Prot
Match: KCC1_SCHPO (Calcium/calmodulin-dependent protein kinase type I OS=Schizosaccharomyces pombe GN=cmk1 PE=1 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.085e-17
Identity = 42/131 (32.06%), Postives = 66/131 (50.38%), Query Frame = 1
Query:   64 ELYAMKAMEKSVMLNRNKVHRACIEREIMSL----LDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQK---DGHVVLTDFDLS 435
            ++YA K M K +M  +       ++ EI  L     +HP +  L   F+T  ++ LIT+   GGELF  +  +    F E  A          ++YLH  GI++RDLKPEN+L +    +  +++ DF LS
Sbjct:   55 KMYAAKIMNKKMMEKKQDF----VKNEIAILKRVSYEHPNILHLVDFFETVNNLYLITELATGGELFDRICAKGS--FYEADAAALMRTTTSAVKYLHDNGIVHRDLKPENLLYRSKDPNSDLLIADFGLS 179          

HSP 2 Score: 52.7582 bits (125), Expect = 1.085e-17
Identity = 31/110 (28.18%), Postives = 50/110 (45.45%), Query Frame = 3
Query:  537 YTVKFICWNRKYIAPEIITGAGHSSAIDWWAXGILLYEMLYGRTPFRGKNRQKTFANILHKDLTF--PSSIPVSLAAKQLINGVVNRDSRDPLGSITGGNEINNTLSSRK 860
            Y +   C   +Y+APE+    G+   +D WA G++ Y +L G TPF   ++ +    IL  + TF  P    +S  AK  I   +     DP   +T  + + +   S K
Sbjct:  188 YMLMTACGTPEYMAPEVFRRTGYGKPVDMWAIGVITYFLLSGYTPFARPSQVEVIEAILANEYTFNDPCWSGISETAKDFIKKCL---ENDPSKRLTAADALKHPFLSEK 294          
BLAST of EY702240 vs. ExPASy Swiss-Prot
Match: ROCK_CAEBR (Rho-associated protein kinase let-502 OS=Caenorhabditis briggsae GN=let-502 PE=3 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.365e-17
Identity = 49/136 (36.03%), Postives = 75/136 (55.15%), Query Frame = 1
Query:   19 GDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDF 426
            G  G VHLV       +YAMK + K  M+ R        ER+IM+  +  ++  L  +FQ   H+ ++ ++ PGG+L  L+    +    E   RFY AE+V  L  LH +G I+RD+KP+N+L+ + GH+ L DF
Sbjct:   77 GAFGEVHLVRHTRTNTVYAMKMLNKDDMIKRADSAFFWEERDIMAHANSEWIVRLQYAFQDPRHLYMVMEYMPGGDLVNLMTSYEVS---EKWTRFYTAEIVEALAALHNMGYIHRDVKPDNMLISRSGHIKLADF 209          
BLAST of EY702240 vs. ExPASy Swiss-Prot
Match: HUNKB_XENLA (Hormonally up-regulated neu tumor-associated kinase homolog B (Fragment) OS=Xenopus laevis GN=hunk-B PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.390e-17
Identity = 41/128 (32.03%), Postives = 69/128 (53.91%), Query Frame = 1
Query:   55 GAGELYAMKAMEKSVMLNRNKVHRACI-EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 435
            G GE  A+K ++K        V +    E +I  ++ HP +  L    +T     L+ + CPGG L   + ++  K   E  AR Y  ++++ +E+LH  G+++RDLK EN+LL ++ ++ L DF LS
Sbjct:    9 GTGEKVAVKVIDKKKAKKDTYVTKNLRREGQIQQMIRHPNITQLLDILETENSYYLVMELCPGGNLMHKIYEK--KRLEEHEARKYIRQLILAVEHLHRAGVVHRDLKIENLLLDENNNIKLIDFGLS 134          

HSP 2 Score: 38.1206 bits (87), Expect = 1.390e-17
Identity = 26/105 (24.76%), Postives = 49/105 (46.67%), Query Frame = 3
Query:  492 KI*ESATANIFGRTSYTVKFI--CWNRKYIAPEIITGAGHSSAIDWWAXGILLYEMLYGRTPFRGK--NRQKTFANILHKDLTFPSSIPVSLAAKQLINGVVNRD 794
            K+ +   +N  G   Y+  F   C +  Y APE++    +   +D W+ G+ +Y ML G  PF  +  + +  +  ++ KD+  P    +S AA   +  ++  D
Sbjct:  127 KLIDFGLSNCAGILGYSDPFSTQCGSPAYAAPELLARKKYGPKVDVWSIGVNMYAMLTGTLPFTVEPFSLRALYQKMVDKDMN-PLPTHISPAAISCLRSLLEPD 230          
BLAST of EY702240 vs. ExPASy Swiss-Prot
Match: ST17A_RABIT (Serine/threonine-protein kinase 17A OS=Oryctolagus cuniculus GN=STK17A PE=2 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 1.405e-17
Identity = 37/132 (28.03%), Postives = 68/132 (51.52%), Query Frame = 1
Query:   58 AGELYAMKAMEKSVMLNRNKVHRACIEREIMSL---LDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKD---GHVVLTDFDLS 435
            +G+ +A K M K     + +  R  I  EI  L    D+P++  L+  ++TS+ + L+ ++  GGE+         + F E   +    +++ G+ +LH   +++ DLKP+NILL  +   G + + DF LS
Sbjct:   66 SGKEFAAKFMRKR---RKGQDCRMEIIHEIAVLELAQDNPWVINLHEVYETSSEMILVLEYAAGGEISDQCVADRDEAFNEKDVQRLMRQILEGVHFLHTHDVVHLDLKPQNILLTSESPLGDIKIVDFGLS 194          

HSP 2 Score: 55.4546 bits (132), Expect = 1.405e-17
Identity = 27/68 (39.71%), Postives = 42/68 (61.76%), Query Frame = 3
Query:  528 RTSYTVKFICWNRKYIAPEIITGAGHSSAIDWWAXGILLYEMLYGRTPFRGKNRQKTFANILHKDLTF 731
            + S  ++ I    +Y+APEI++    S A D W+ G+L Y ML G +PF G N+Q+TF NI   +L++
Sbjct:  198 KNSEELREIMGTPEYVAPEILSYDPISMATDMWSIGVLTYVMLTGISPFLGDNKQETFLNISQMNLSY 265          
BLAST of EY702240 vs. ExPASy Swiss-Prot
Match: TSSK4_MOUSE (Testis-specific serine/threonine-protein kinase 4 OS=Mus musculus GN=Tssk4 PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.412e-17
Identity = 32/102 (31.37%), Postives = 59/102 (57.84%), Query Frame = 1
Query:  136 EREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFM 441
            E ++M +L H +L   Y + +T++ + +I +   GG++   +  Q      E  A  + +++ +G+ YLH  GI++RDLK EN+LL K  +V ++DF  + M
Sbjct:   73 EIQVMKVLRHKYLINFYQAIETTSRVYIILELAQGGDVLEWI--QRYGACAETLAGKWFSQMALGIAYLHSKGIVHRDLKLENLLLDKRENVKISDFGFAKM 172          

HSP 2 Score: 48.521 bits (114), Expect = 1.412e-17
Identity = 25/90 (27.78%), Postives = 49/90 (54.44%), Query Frame = 3
Query:  534 SYTVKFICWNRKYIAPEIITGAGHSSAI-DWWAXGILLYEMLYGRTPFRGKNRQKTFANILHKDLTFPSSIPVSLAAKQLINGVVNRDSR 800
            S+  +  C +  Y  PEI+ G  ++  + D W+ G++LY ++  R PF   N +K       K++TFP+++ +S   K LI  ++ + ++
Sbjct:  192 SHLSQTYCGSFAYACPEILLGLPYNPFLSDTWSMGVILYTLVVARLPFDDTNLKKLLRE-TQKEVTFPANLTISQECKNLILQLLRQSTK 280          
BLAST of EY702240 vs. ExPASy Swiss-Prot
Match: GRK6_RAT (G protein-coupled receptor kinase 6 OS=Rattus norvegicus GN=Grk6 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.782e-17
Identity = 51/145 (35.17%), Postives = 79/145 (54.48%), Query Frame = 1
Query:    1 FRPTRPGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 435
            +R    G  G V   +++  G++YA K +EK  +  R     A  E++I+  ++  F+ +L  +++T   +CL+     GG+L   +       F E  A FYAAE+  GLE LH   I+YRDLKPENILL   GH+ ++D  L+
Sbjct:  189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLT 333          
BLAST of EY702240 vs. ExPASy Swiss-Prot
Match: GRK6_MOUSE (G protein-coupled receptor kinase 6 OS=Mus musculus GN=Grk6 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.782e-17
Identity = 51/145 (35.17%), Postives = 79/145 (54.48%), Query Frame = 1
Query:    1 FRPTRPGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 435
            +R    G  G V   +++  G++YA K +EK  +  R     A  E++I+  ++  F+ +L  +++T   +CL+     GG+L   +       F E  A FYAAE+  GLE LH   I+YRDLKPENILL   GH+ ++D  L+
Sbjct:  189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA 333          
BLAST of EY702240 vs. ExPASy Swiss-Prot
Match: GRK6_HUMAN (G protein-coupled receptor kinase 6 OS=Homo sapiens GN=GRK6 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.782e-17
Identity = 51/145 (35.17%), Postives = 79/145 (54.48%), Query Frame = 1
Query:    1 FRPTRPGDTGSVHLVELQGAGELYAMKAMEKSVMLNRNKVHRACIEREIMSLLDHPFLPTLYASFQTSTHICLITDFCPGGELFALLDKQPMKIFREDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLS 435
            +R    G  G V   +++  G++YA K +EK  +  R     A  E++I+  ++  F+ +L  +++T   +CL+     GG+L   +       F E  A FYAAE+  GLE LH   I+YRDLKPENILL   GH+ ++D  L+
Sbjct:  189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA 333          
The following BLAST results are available for this feature:
BLAST of EY702240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CIPK4_ORYSJ1.077e-1732.14CBL-interacting protein kinase 4 OS=Oryza sativa s... [more]
KPSH1_MOUSE1.079e-1730.28Serine/threonine-protein kinase H1 OS=Mus musculus... [more]
KCC1_SCHPO1.085e-1732.06Calcium/calmodulin-dependent protein kinase type I... [more]
ROCK_CAEBR1.365e-1736.03Rho-associated protein kinase let-502 OS=Caenorhab... [more]
HUNKB_XENLA1.390e-1732.03Hormonally up-regulated neu tumor-associated kinas... [more]
ST17A_RABIT1.405e-1728.03Serine/threonine-protein kinase 17A OS=Oryctolagus... [more]
TSSK4_MOUSE1.412e-1731.37Testis-specific serine/threonine-protein kinase 4 ... [more]
GRK6_RAT1.782e-1735.17G protein-coupled receptor kinase 6 OS=Rattus norv... [more]
GRK6_MOUSE1.782e-1735.17G protein-coupled receptor kinase 6 OS=Mus musculu... [more]
GRK6_HUMAN1.782e-1735.17G protein-coupled receptor kinase 6 OS=Homo sapien... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-F04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702240 ID=EY702240; Name=EY702240; organism=Citrus sinensis; type=EST; length=884bp
TTCCGACCCACGCGTCCGGGTGACACTGGTAGCGTTCATCTGGTGGAACT
GCAAGGTGCAGGTGAACTGTATGCTATGAAGGCAATGGAAAAATCTGTAA
TGTTGAATCGTAACAAGGTTCACCGAGCATGCATTGAAAGGGAAATCATG
TCACTACTGGATCATCCTTTTCTTCCTACTCTTTACGCCTCCTTTCAGAC
TTCTACACACATTTGTTTGATAACAGACTTTTGCCCTGGTGGAGAGTTAT
TTGCCTTGCTTGACAAGCAGCCTATGAAGATATTTAGAGAGGATTCAGCT
AGGTTCTATGCAGCAGAGGTTGTCATTGGCTTGGAATATCTGCACTGCTT
AGGAATAATTTATCGGGACCTGAAGCCTGAAAATATTTTACTTCAGAAAG
ATGGGCATGTCGTATTGACTGACTTTGATTTGTCATTTATGACATCCTGC
AAACCCCAAATTATTAAGCATGCACCATCAAGTAGTAGGAGAAGATCTAG
GAGTCAGCCACCGCCAACATTTTTGGCAGAACCAGTTACACAGTCAAATT
CATTTGTTGGAACCGAAAATACATTGCTCCAGAAATTATTACAGGTGCAG
GCCACAGTAGTGCTATTGATTGGTGGGCTGNTGGTATTTTGTTGTATGAG
ATGCTCTACGGNCGTACCCCTTTCAGGGGTAAAAATAGACAGAAAACATT
TGCCAATATCTTGCACAAAGACCTCACTTTTCCAAGCAGCATTCCGGTAA
GTCTCGCGGCTAAGCAGCTAATTAATGGTGTTGTGAACAGAGATTCCCGG
GACCCGTTAGGATCAATAACTGGTGGCAATGAAATTAACAACACCCTTTC
TTCCCGGAAATAAATTGGCTCTGATTCCTCCATG
back to top