EY702206

Overview
NameEY702206
Unique NameEY702206
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL81_ORYSJ (Putative germin-like protein 8-1 OS=Oryza sativa subsp. japonica GN=Os08g0188900 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 4.557e-31
Identity = 68/114 (59.65%), Postives = 80/114 (70.18%), Query Frame = 3
Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSD 386
            +P  LQD CVA  D    V VNG  CK+P    A+DFF +  L KP +TA N++G + T  NV +IPGLNTLGIS  R+DYAP G  PPH HPRA+EIF VLEGTLYVGFVTS+
Sbjct:   25 EPSPLQDFCVA--DLNSAVRVNGFACKNPTNVSADDFFKAAMLDKPRDTAVNKVGSNITLINVMEIPGLNTLGISIVRVDYAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSN 136          

HSP 2 Score: 33.4982 bits (75), Expect = 4.557e-31
Identity = 15/18 (83.33%), Postives = 15/18 (83.33%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHF 463
            K LNKGDVFVF  GLIHF
Sbjct:  144 KVLNKGDVFVFPKGLIHF 161          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL811_ORYSJ (Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.438e-31
Identity = 65/113 (57.52%), Postives = 75/113 (66.37%), Query Frame = 3
Query:   48 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSD 386
            +DP  LQD CVA  D    V VNG  C +PK   A+ FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP GQ PPH HPRA+EI  VLEGTLYVGFVTS+
Sbjct:   23 SDPSPLQDFCVA--DMHSPVLVNGFACLNPKDVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSN 133          

HSP 2 Score: 33.4982 bits (75), Expect = 5.438e-31
Identity = 15/18 (83.33%), Postives = 15/18 (83.33%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHF 463
            K LNKGDVFVF  GLIHF
Sbjct:  141 KVLNKGDVFVFPVGLIHF 158          

HSP 3 Score: 21.1718 bits (43), Expect = 5.438e-31
Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 1
Query:  511 QFPGEITITEPVFGA 555
            Q PG ITI   VFG+
Sbjct:  177 QNPGAITIANAVFGS 191          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL25_ARATH (Probable germin-like protein subfamily 2 member 5 OS=Arabidopsis thaliana GN=At5g26700 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 1.311e-30
Identity = 64/107 (59.81%), Postives = 71/107 (66.36%), Query Frame = 3
Query:   63 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTS 383
            LQDVCVA  D  + V VNG  CKD      EDF+F GL     T    G   T ANVE++PGLNTLG+S  RIDYAP G  PPH+HPRASEI  VLEG LYVGFVT+
Sbjct:   25 LQDVCVA--DLSNAVKVNGYTCKDSTQITPEDFYFKGLANIAATNTSTGSVVTGANVEKLPGLNTLGLSMSRIDYAPNGLNPPHVHPRASEIIFVLEGQLYVGFVTT 129          

HSP 2 Score: 33.4982 bits (75), Expect = 1.311e-30
Identity = 14/21 (66.67%), Postives = 16/21 (76.19%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHFNSH 472
            K+LNKGDVF F  GLIHF  +
Sbjct:  136 KNLNKGDVFTFPKGLIHFQKN 156          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL122_ORYSJ (Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.764e-30
Identity = 67/116 (57.76%), Postives = 78/116 (67.24%), Query Frame = 3
Query:   48 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQ 389
            +DP  LQD CVA  D    V VNG  CKD K    +DFF +  L KP +T  ++ G + T  NV ++ GLNTLGIS  RIDYAP GQ PPH HPRA+EI  VLEGTLYVGFVTS+Q
Sbjct:   23 SDPSPLQDFCVA--DRNSPVHVNGFPCKDAKDVNVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVLEGTLYVGFVTSNQ 136          

HSP 2 Score: 34.6538 bits (78), Expect = 3.764e-30
Identity = 15/18 (83.33%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHF 463
            K+LNKGDVFVF  GLIHF
Sbjct:  146 KTLNKGDVFVFPQGLIHF 163          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 3.773e-30
Identity = 64/111 (57.66%), Postives = 73/111 (65.77%), Query Frame = 3
Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTS 383
            DP  LQD+CVA  D   G+ +NG  CKD     + DFF  GL KPG T N  G   T ANV  IPGLNTLG+S  RIDYAP G  PPH HPRA+E+  VLEGTL VGF+T+
Sbjct:   24 DPDMLQDLCVA--DLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFLTT 132          

HSP 2 Score: 30.4166 bits (67), Expect = 3.773e-30
Identity = 12/21 (57.14%), Postives = 15/21 (71.43%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHFNSH 472
            +SL KGDVF F  GL+HF  +
Sbjct:  139 QSLKKGDVFAFPKGLVHFQKN 159          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL85_ORYSJ (Germin-like protein 8-5 OS=Oryza sativa subsp. japonica GN=Os08g0189400 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 8.312e-30
Identity = 68/123 (55.28%), Postives = 78/123 (63.41%), Query Frame = 3
Query:   48 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAKV 416
            +DP  LQD CVA  D    V VNG  C +P    A+ FF +         N++G + T  NV QIPGLNTLGIS  RIDYAP GQ PPH HPRA+EI  VLEGTLYVGFVTS+    TL +KV
Sbjct:   23 SDPSPLQDFCVA--DMHSPVRVNGFACLNPMEVNADHFFKAAKLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKV 142          

HSP 2 Score: 33.4982 bits (75), Expect = 8.312e-30
Identity = 15/18 (83.33%), Postives = 15/18 (83.33%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHF 463
            K LNKGDVFVF  GLIHF
Sbjct:  141 KVLNKGDVFVFPQGLIHF 158          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL24_ARATH (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.083e-29
Identity = 63/111 (56.76%), Postives = 74/111 (66.67%), Query Frame = 3
Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTS 383
            DP  LQD+CVA  D   G+ VNG  CK      A DFFF+G+GKP    N +G   T ANVE+I GLNTLG+S  RIDYAP G  PPH HPRA+E+  VLEG L VGF+T+
Sbjct:   23 DPDTLQDLCVA--DRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGFITT 131          

HSP 2 Score: 28.8758 bits (63), Expect = 1.083e-29
Identity = 11/21 (52.38%), Postives = 16/21 (76.19%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHFNSH 472
            K++ KG+VFVF  GLIH+  +
Sbjct:  138 KTVKKGEVFVFPRGLIHYQKN 158          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL812_ORYSJ (Germin-like protein 8-12 OS=Oryza sativa subsp. japonica GN=Os08g0231400 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.409e-29
Identity = 71/123 (57.72%), Postives = 82/123 (66.67%), Query Frame = 3
Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAKV 416
            DP  LQD CVA  D    V VNG  CK+P    +EDFF +     P NT N+LG + T+ NV + PGLNTLGIS  RIDYAP G  PPHIHPRA+E+  VLEGTLYVGFVTS+  K  L +KV
Sbjct:   25 DPSPLQDFCVA--DMNSPVRVNGFACKNPMDVSSEDFFNAAKFDMPRNTFNKLGSNVTNLNVMEFPGLNTLGISLARIDYAPMGVNPPHIHPRATELLTVLEGTLYVGFVTSNPNK--LFSKV 143          

HSP 2 Score: 25.7942 bits (55), Expect = 1.409e-29
Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHF 463
            K + KGDVFVF   +IHF
Sbjct:  142 KVVCKGDVFVFPKAMIHF 159          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL23_ARATH (Germin-like protein subfamily 2 member 3 OS=Arabidopsis thaliana GN=GLP8 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.836e-29
Identity = 64/112 (57.14%), Postives = 75/112 (66.96%), Query Frame = 3
Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANR-LGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTS 383
            D   LQD CVA  D  +G+ VNG  CKDP     EDF+F GL     TAN  +G   T ANVE++PGLNTLG+S  RIDYAP G  PPH+HPRASE   VLEG L+VGF+T+
Sbjct:   23 DTNMLQDFCVA--DLSNGLKVNGYPCKDPAKVTPEDFYFIGLATAAATANSSMGSAVTGANVEKVPGLNTLGVSISRIDYAPGGLNPPHLHPRASEAIFVLEGRLFVGFLTT 132          

HSP 2 Score: 30.0314 bits (66), Expect = 1.836e-29
Identity = 12/21 (57.14%), Postives = 15/21 (71.43%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHFNSH 472
            K +NKGDVFVF   L+HF  +
Sbjct:  139 KHVNKGDVFVFPKALLHFQQN 159          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL121_ORYSJ (Germin-like protein 12-1 OS=Oryza sativa subsp. japonica GN=Os12g0154700 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.388e-29
Identity = 66/115 (57.39%), Postives = 76/115 (66.09%), Query Frame = 3
Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFF-SGLGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQ 389
            DP  LQD CVA  D    V VNG  CKD K    +DFF  + L KP +T  ++ G + T  NV ++ GLNTLGIS  RIDYAP GQ PPH HPRA+EI  V EGTLYVGFVTS+Q
Sbjct:   24 DPSPLQDFCVA--DRNSPVRVNGFPCKDAKDVNVDDFFLEANLDKPMDTTKSKAGSNVTLINVMKLTGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVFEGTLYVGFVTSNQ 136          

HSP 2 Score: 34.6538 bits (78), Expect = 2.388e-29
Identity = 15/18 (83.33%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHF 463
            K+LNKGDVFVF  GLIHF
Sbjct:  146 KTLNKGDVFVFPQGLIHF 163          
The following BLAST results are available for this feature:
BLAST of EY702206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
GL81_ORYSJ4.557e-3159.65Putative germin-like protein 8-1 OS=Oryza sativa s... [more]
GL811_ORYSJ5.438e-3157.52Germin-like protein 8-11 OS=Oryza sativa subsp. ja... [more]
GL25_ARATH1.311e-3059.81Probable germin-like protein subfamily 2 member 5 ... [more]
GL122_ORYSJ3.764e-3057.76Germin-like protein 12-2 OS=Oryza sativa subsp. ja... [more]
GL21_ARATH3.773e-3057.66Germin-like protein subfamily 2 member 1 OS=Arabid... [more]
GL85_ORYSJ8.312e-3055.28Germin-like protein 8-5 OS=Oryza sativa subsp. jap... [more]
GL24_ARATH1.083e-2956.76Germin-like protein subfamily 2 member 4 OS=Arabid... [more]
GL812_ORYSJ1.409e-2957.72Germin-like protein 8-12 OS=Oryza sativa subsp. ja... [more]
GL23_ARATH1.836e-2957.14Germin-like protein subfamily 2 member 3 OS=Arabid... [more]
GL121_ORYSJ2.388e-2957.39Germin-like protein 12-1 OS=Oryza sativa subsp. ja... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-C05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702206 ID=EY702206; Name=EY702206; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGGCCCTCTTGTCTTCGGCTTCTTCTTTGGCCTCTGCCACT
GACCCTGGCCATCTTCAAGATGTCTGTGTAGCCATCAATGACCCCAAGGA
TGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTTGCGAGAG
CAGAAGATTTCTTCTTCTCAGGGCTAGGCAAGCCTGGAAACACAGCAAAT
CGACTTGGTGTTGATGAAACAGATGCAAATGTTGAGCAAATTCCAGGACT
CAACACCCTTGGCATATCAGCATTCCGTATTGACTATGCACCATATGGCC
AAAGGCCACCTCACATTCACCCCCGTGCCAGCGAAATCTTCTTAGTCCTG
GAAGGAACTCTTTATGTCGGTTTTGTGACATCAGACCAACTGAAATACAC
ACTCATCGCAAAAGTCTAAATAAGGGAGATGTTTTTGTGTTCCACAANGG
TTTGATTCACTTCAATTCACATTGAAAAACAAATGCAGCTGCCTAATCTG
CTCTAAACAGCAATTCCCGGGGGAAATTACCATAACCGAACCAGTCTTTG
GAGCAATCCTTTATCAATCCCGATTTCCTTGGAAAGGTTTTCCGTTGGAC
CCAAAATATGGAAAAATCTTCCAAATAAGTTCTTTATGGGGTATTGGGGA
AAGGGATTTTGGGGCTTTAATATAAAGGGCCCTTCCCAAAGGGGTGGTTA
CTTTTATCCCCAAAATTCTTTTTTTTTTTAATGGATAAAAAAAGGGCTCT
CTGAACCCCTCTCCCGGGGGGGGGGGGGCGGGGATAAAAAAAATTGTTTT
TGTTTTTTTTTCGCCGCAAAAAAAAAAAAGAGCCACACCCCCACAGAAAA
AGAAAAAACAGG
back to top