EY702206

Overview
NameEY702206
Unique NameEY702206
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL123_ORYSJ (Putative germin-like protein 12-3 OS=Oryza sativa subsp. japonica GN=Os12g0154900 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.110e-29
Identity = 65/116 (56.03%), Postives = 79/116 (68.10%), Query Frame = 3
Query:   48 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGN-TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQ 389
            +DP  LQD+CVA  D    V VNG  CKD K    +DFF +  L KP + T ++ G + T  NV ++ GLNTLGIS  RIDYAP GQ PPH HPRA+EI  V+EG+LYVGFVTS+Q
Sbjct:   23 SDPSPLQDLCVA--DKNSPVRVNGFPCKDAKDVSVDDFFLAANLDKPMDITKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILSVIEGSLYVGFVTSNQ 136          

HSP 2 Score: 34.6538 bits (78), Expect = 3.110e-29
Identity = 15/18 (83.33%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHF 463
            K+LNKGDVFVF  GLIHF
Sbjct:  146 KTLNKGDVFVFPEGLIHF 163          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL11_ORYSJ (Germin-like protein 1-1 OS=Oryza sativa subsp. japonica GN=GER4 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 5.279e-29
Identity = 66/117 (56.41%), Postives = 77/117 (65.81%), Query Frame = 3
Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYT 401
            DP  LQDVCVA  D    V +NG  CK      A+DFFF+GL  PGNT N  G + T ANV+  PG+NTLG+S  RIDYAP GQ PPH HPRA+EI  VLEG L VGF+T+    +T
Sbjct:   26 DPDMLQDVCVA--DLASPVKLNGFPCKAN--VTADDFFFAGLKNPGNTNNPAGSNVTAANVQSFPGVNTLGVSMARIDYAPGGQNPPHTHPRATEIIFVLEGVLEVGFITTANKLFT 138          

HSP 2 Score: 27.335 bits (59), Expect = 5.279e-29
Identity = 10/21 (47.62%), Postives = 15/21 (71.43%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHFNSH 472
            K++  G+VFVF  GL+HF  +
Sbjct:  139 KTVTAGEVFVFPRGLVHFQQN 159          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL124_ORYSJ (Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 8.937e-29
Identity = 65/116 (56.03%), Postives = 77/116 (66.38%), Query Frame = 3
Query:   48 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQ 389
            +DP  LQD CVA  D    V VNG  CKD K    +DFF +  L KP +T  ++ G + T  NV ++ GLNTL IS  RIDYAP GQ PPH HPRA+EI  VLEG+LYVGFVTS+Q
Sbjct:   23 SDPSPLQDFCVA--DKHSPVRVNGLPCKDAKDVSVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLSISMARIDYAPKGQNPPHTHPRATEILTVLEGSLYVGFVTSNQ 136          

HSP 2 Score: 34.6538 bits (78), Expect = 8.937e-29
Identity = 15/18 (83.33%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHF 463
            K+LNKGDVFVF  GLIHF
Sbjct:  146 KTLNKGDVFVFPQGLIHF 163          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL52_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 8.942e-29
Identity = 64/117 (54.70%), Postives = 75/117 (64.10%), Query Frame = 3
Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYT 401
            DP  LQD+CVA  D    V VNG  CK       +DF+F GL   GNT N  G   T ANVE++PGLNTLG+S  RIDYAP G  PPH HPRA+E+  VL+GTL VGF+T+    YT
Sbjct:   27 DPDLLQDICVA--DLTSAVKVNGFACK--AAVTEDDFYFKGLAAAGNTNNTYGSVVTGANVEKLPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLQGTLDVGFITTANKLYT 139          

HSP 2 Score: 29.6462 bits (65), Expect = 8.942e-29
Identity = 11/23 (47.83%), Postives = 17/23 (73.91%), Query Frame = 2
Query:  404 HRKSLNKGDVFVFHXGLIHFNSH 472
            + K+++ GDVFVF  GL+HF  +
Sbjct:  138 YTKTISAGDVFVFPRGLLHFQKN 160          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL13_ORYSJ (Germin-like protein 1-3 OS=Oryza sativa subsp. japonica GN=GER8 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.164e-28
Identity = 64/118 (54.24%), Postives = 78/118 (66.10%), Query Frame = 3
Query:   51 DPGHLQDVCVA-INDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYT 401
            DP  LQDVCVA     K  + +NG  CK  +   A DFFF GL K GNT N +G   T A+VE +PGLNT+G+S  RIDYAP+G  PPH HPRA+EI  V+EG+L VGFVT+    +T
Sbjct:   24 DPDMLQDVCVADYKSLKGPLRLNGFPCKRIENVTANDFFFDGLMKAGNTGNAVGSVVTAASVESLPGLNTMGVSMARIDYAPWGLNPPHTHPRATEIIFVVEGSLDVGFVTTANKLFT 141          

HSP 2 Score: 27.335 bits (59), Expect = 1.164e-28
Identity = 10/21 (47.62%), Postives = 16/21 (76.19%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHFNSH 472
            +++ KG+VFVF  GL+HF  +
Sbjct:  142 RTVCKGEVFVFPRGLVHFQKN 162          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL83_ORYSJ (Germin-like protein 8-3 OS=Oryza sativa subsp. japonica GN=GER2 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.515e-28
Identity = 64/113 (56.64%), Postives = 76/113 (67.26%), Query Frame = 3
Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSD 386
            DP  LQD CVA  D    V VNG  CK+P    ++DFF +     P NT N++G + T+ NV   PGLNTLGIS  RIDYAP G  PPH+HPRA+E+  VLEGTLYVGFVTS+
Sbjct:   25 DPSPLQDFCVA--DMASPVRVNGFPCKNPMNVTSDDFFNAAKFDMPRNTMNKVGSNVTNLNVINFPGLNTLGISLARIDYAPMGVNPPHVHPRATELLTVLEGTLYVGFVTSN 135          

HSP 2 Score: 27.335 bits (59), Expect = 1.515e-28
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHF 463
            K ++KGDVFVF   +IHF
Sbjct:  142 KVVHKGDVFVFPKAMIHF 159          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL84_ORYSJ (Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.973e-28
Identity = 65/113 (57.52%), Postives = 77/113 (68.14%), Query Frame = 3
Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSD 386
            DP  LQD CVA  D K  V VNG  CK+P    ++DFF +     P +T N++G + T+ NV   PGLNTLGIS  RIDYAP G  PPHIHPRA+E+  VLEGTLYVGFVTS+
Sbjct:   25 DPSPLQDFCVA--DMKSPVRVNGFPCKNPMEVNSDDFFNAAKFDMPRSTMNKVGSNVTNLNVLNFPGLNTLGISLARIDYAPLGVNPPHIHPRATELLTVLEGTLYVGFVTSN 135          

HSP 2 Score: 25.7942 bits (55), Expect = 1.973e-28
Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHF 463
            K ++KGD FVF   +IHF
Sbjct:  142 KVVHKGDTFVFPKAMIHF 159          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL32_ORYSJ (Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.569e-28
Identity = 64/118 (54.24%), Postives = 76/118 (64.41%), Query Frame = 3
Query:   51 DPGHLQDVCVAINDPKDGVF-VNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYT 401
            DP  LQDVCVA      G   +NG  CK  +   A DFFF GL   GNT N +G   T A+VE++PGLNT+G+S  RIDYAP+G  PPH HPRA+EI  V EGTL VGFVT+    +T
Sbjct:   24 DPDMLQDVCVADYKSLRGPLRLNGIPCKRLENVTANDFFFDGLTNAGNTTNAVGSLVTAASVERLPGLNTMGVSMARIDYAPWGLSPPHTHPRATEIMFVAEGTLDVGFVTTANKLFT 141          

HSP 2 Score: 28.4906 bits (62), Expect = 2.569e-28
Identity = 10/18 (55.56%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHF 463
            ++++KG+VFVF  GL+HF
Sbjct:  142 RTVSKGEVFVFPRGLVHF 159          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL22_ARATH (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.121e-27
Identity = 61/122 (50.00%), Postives = 76/122 (62.30%), Query Frame = 3
Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAKV 416
            DP  LQD+CVA  D   G  +NG  CK+       DFFF+G+ KP    + +G   T ANVE+IPGLNTL +S  RIDYAP G  PPH HPRA+E+  VLEG L VGF+T+    +T   K+
Sbjct:   24 DPDALQDLCVA--DKSHGTKLNGFPCKETLNITESDFFFAGISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFITTANKLFTKTIKI 143          

HSP 2 Score: 26.9498 bits (58), Expect = 2.121e-27
Identity = 10/21 (47.62%), Postives = 15/21 (71.43%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHFNSH 472
            K++  G+VFVF  GL+HF  +
Sbjct:  139 KTIKIGEVFVFPRGLVHFQKN 159          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.965e-26
Identity = 66/122 (54.10%), Postives = 77/122 (63.11%), Query Frame = 3
Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFV-TSDQLKYTLIAK 413
            D   LQD+CVA  D    + VNG  CK      AEDFF + L K G T N  G   T ANV++IPGLNTLG+S  RIDYAP G  PPH HPRA+E+  VLEG L VGF+ T++QL    IAK
Sbjct:   22 DADALQDLCVA--DYASVILVNGFACKPASNVTAEDFFSNLLVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLEGQLDVGFITTTNQLIAKTIAK 141          

HSP 2 Score: 27.7202 bits (60), Expect = 2.965e-26
Identity = 10/21 (47.62%), Postives = 15/21 (71.43%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHFNSH 472
            K++ KG+ FVF  GL+HF  +
Sbjct:  137 KTIAKGETFVFPKGLVHFQKN 157          
The following BLAST results are available for this feature:
BLAST of EY702206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
GL123_ORYSJ3.110e-2956.03Putative germin-like protein 12-3 OS=Oryza sativa ... [more]
GL11_ORYSJ5.279e-2956.41Germin-like protein 1-1 OS=Oryza sativa subsp. jap... [more]
GL124_ORYSJ8.937e-2956.03Putative germin-like protein 12-4 OS=Oryza sativa ... [more]
GL52_ORYSJ8.942e-2954.70Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GL13_ORYSJ1.164e-2854.24Germin-like protein 1-3 OS=Oryza sativa subsp. jap... [more]
GL83_ORYSJ1.515e-2856.64Germin-like protein 8-3 OS=Oryza sativa subsp. jap... [more]
GL84_ORYSJ1.973e-2857.52Germin-like protein 8-4 OS=Oryza sativa subsp. jap... [more]
GL32_ORYSJ2.569e-2854.24Putative germin-like protein 3-2 OS=Oryza sativa s... [more]
GL22_ARATH2.121e-2750.00Germin-like protein subfamily 2 member 2 OS=Arabid... [more]
RHRE_PEA2.965e-2654.10Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-C05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702206 ID=EY702206; Name=EY702206; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGGCCCTCTTGTCTTCGGCTTCTTCTTTGGCCTCTGCCACT
GACCCTGGCCATCTTCAAGATGTCTGTGTAGCCATCAATGACCCCAAGGA
TGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTTGCGAGAG
CAGAAGATTTCTTCTTCTCAGGGCTAGGCAAGCCTGGAAACACAGCAAAT
CGACTTGGTGTTGATGAAACAGATGCAAATGTTGAGCAAATTCCAGGACT
CAACACCCTTGGCATATCAGCATTCCGTATTGACTATGCACCATATGGCC
AAAGGCCACCTCACATTCACCCCCGTGCCAGCGAAATCTTCTTAGTCCTG
GAAGGAACTCTTTATGTCGGTTTTGTGACATCAGACCAACTGAAATACAC
ACTCATCGCAAAAGTCTAAATAAGGGAGATGTTTTTGTGTTCCACAANGG
TTTGATTCACTTCAATTCACATTGAAAAACAAATGCAGCTGCCTAATCTG
CTCTAAACAGCAATTCCCGGGGGAAATTACCATAACCGAACCAGTCTTTG
GAGCAATCCTTTATCAATCCCGATTTCCTTGGAAAGGTTTTCCGTTGGAC
CCAAAATATGGAAAAATCTTCCAAATAAGTTCTTTATGGGGTATTGGGGA
AAGGGATTTTGGGGCTTTAATATAAAGGGCCCTTCCCAAAGGGGTGGTTA
CTTTTATCCCCAAAATTCTTTTTTTTTTTAATGGATAAAAAAAGGGCTCT
CTGAACCCCTCTCCCGGGGGGGGGGGGGCGGGGATAAAAAAAATTGTTTT
TGTTTTTTTTTCGCCGCAAAAAAAAAAAAGAGCCACACCCCCACAGAAAA
AGAAAAAACAGG
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