EY702206

Overview
NameEY702206
Unique NameEY702206
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: NEC1_NICPL (Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 8.499e-26
Identity = 62/111 (55.86%), Postives = 70/111 (63.06%), Query Frame = 3
Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTS 383
            D   LQDVCVA  D    V VNG  CK      A DF    + KPG T N+ G   T ANVEQ+PGLNTLG+S  RIDYAP G  PPH HPRASE+  V+EG L VGF+T+
Sbjct:   34 DEDMLQDVCVA--DLHSKVKVNGFPCKTN--FTAADFSSFAISKPGATNNKFGSKVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITT 140          

HSP 2 Score: 29.6462 bits (65), Expect = 8.499e-26
Identity = 11/21 (52.38%), Postives = 15/21 (71.43%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHFNSH 472
            K + KG+VFVF  GL+HF  +
Sbjct:  147 KQITKGEVFVFPRGLVHFQKN 167          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.175e-25
Identity = 62/111 (55.86%), Postives = 70/111 (63.06%), Query Frame = 3
Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTS 383
            D   LQDVCVA  D    V VNG  CK      A DF    + KPG T N+ G   T ANVEQ+PGLNTLG+S  RIDYAP G  PPH HPRASE+  V+EG L VGF+T+
Sbjct:   34 DEDMLQDVCVA--DLHSKVKVNGFPCKTN--FTAADFSSLAISKPGATNNKFGSVVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITT 140          

HSP 2 Score: 28.4906 bits (62), Expect = 3.175e-25
Identity = 11/21 (52.38%), Postives = 15/21 (71.43%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHFNSH 472
            K + KG+VFVF  GL+HF  +
Sbjct:  147 KKIIKGEVFVFPRGLVHFQKN 167          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL51_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0197200 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.377e-25
Identity = 66/117 (56.41%), Postives = 75/117 (64.10%), Query Frame = 3
Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKP------GNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTS 383
            DP  LQD CVA  DP   V VNG  CKDP    A+DFFFSG+G+P      G TA+R     T  +V+ IPGLNTLG SA R+D AP G  PPH HPRASE  +VL G +Y GFVTS
Sbjct:   30 DPNPLQDFCVA--DPTSKVRVNGLPCKDPAAVTADDFFFSGVGEPAAGGGRGATASRR-YGFTARSVD-IPGLNTLGASAARVDVAPGGVFPPHYHPRASETAVVLAGAVYFGFVTS 142          

HSP 2 Score: 25.409 bits (54), Expect = 5.377e-25
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHF 463
            K L +GDVF    GL+HF
Sbjct:  151 KVLRRGDVFAVPQGLVHF 168          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL14_ORYSJ (Germin-like protein 1-4 OS=Oryza sativa subsp. japonica GN=Os01g0952100 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.185e-24
Identity = 62/115 (53.91%), Postives = 73/115 (63.48%), Query Frame = 3
Query:   51 DPGHLQDVCVAINDPKDGVF-VNGKFCKDPKLARAEDFFFSGLGKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPY-GQRPPHIHPRASEIFLVLEGTLYVGFVTS 383
            DP  LQD+CVA      G   VNG  CK      AEDFFF GLGKP +  + N +G   T A VE+IPGLNTLG+S  R+DYAP+ G  PPH HPRA+EI  V +G L VGFV +
Sbjct:   29 DPDMLQDICVADYKSLQGPLRVNGFPCKPEANVTAEDFFFPGLGKPADVYSGNPMGSAVTAATVERIPGLNTLGVSMARVDYAPWGGANPPHSHPRATEILFVADGLLEVGFVVA 143          

HSP 2 Score: 23.8682 bits (50), Expect = 1.185e-24
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  422 KGDVFVFHXGLIHF 463
            KG VFVF  GL+H+
Sbjct:  159 KGGVFVFPRGLLHY 172          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GLT2_ARATH (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.030e-23
Identity = 59/123 (47.97%), Postives = 77/123 (62.60%), Query Frame = 3
Query:   48 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAKV 416
            +D   LQD CV   D K    +NG  CK      A DFFFSGLG P NT+   GV  + ANV   PGLNTLG+S   +++AP G  PPH HPRA+E  +V+EG+++VGF+T++    TL +KV
Sbjct:   28 SDSDPLQDFCVG--DLKASPSINGFPCKSS--VSASDFFFSGLGGPLNTSTPNGVAVSPANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSVFVGFLTTNN---TLFSKV 143          

HSP 2 Score: 25.409 bits (54), Expect = 8.030e-23
Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHF 463
            K LN G++FV   GL+HF
Sbjct:  142 KVLNAGEMFVVPRGLVHF 159          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GLT1_ARATH (Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana GN=GLP1 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 8.030e-23
Identity = 58/123 (47.15%), Postives = 77/123 (62.60%), Query Frame = 3
Query:   48 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAKV 416
            +D   LQD CV   D K    +NG  CK      A DFF+SGLG P +T+N  GV    ANV   PGLNTLGIS   ++ AP G  PPH+HPRA+E+  V+EG+++VGF++++    TL +KV
Sbjct:   28 SDSDPLQDFCVG--DLKASASINGFPCKSA--VSASDFFYSGLGGPLDTSNPNGVTVAPANVLTFPGLNTLGISMNNVELAPGGVNPPHLHPRATEVGTVIEGSVFVGFLSTNN---TLFSKV 143          

HSP 2 Score: 25.409 bits (54), Expect = 8.030e-23
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHF 463
            K LN G+ FV   GL+HF
Sbjct:  142 KVLNAGEAFVIPRGLVHF 159          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 5.072e-22
Identity = 51/120 (42.50%), Postives = 71/120 (59.17%), Query Frame = 3
Query:   48 TDPGHLQDVCVAINDPK-DGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANR-LGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYT 401
            +DP  LQD CV+        +F+NGK CKDP  A   DF  S L +PGNT  +   ++ T      +PGLNT+G++  R+D+   G  PPH+HPRASE+ + L+G L VGFV +    +T
Sbjct:   18 SDPDPLQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRPGNTKTKPFMINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVLLVGFVDTSGRVFT 137          

HSP 2 Score: 25.409 bits (54), Expect = 5.072e-22
Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHF 463
            + L+ G+ FVF  GLIHF
Sbjct:  138 QELHPGETFVFPKGLIHF 155          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GER2_WHEAT (Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.488e-21
Identity = 77/204 (37.75%), Postives = 108/204 (52.94%), Query Frame = 3
Query:   48 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAKV*IR--EMFLCSTXV*FTSIHIEK-QMQLPNLL*TAIPGGNYHNRTSLWSN-PLSIPISLERFSVGPKIWKNLPNKFFMGY 644
            TDP  LQD CVA  D K  V VNG  CK P     +DF FS  L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S      L ++V +R  E FL    +     ++ K +  +     +  PG  +   T   SN P+  P+  +   V  ++ + L +KF  G+
Sbjct:   24 TDPDPLQDFCVADLDGK-AVSVNGHTCK-PMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRV-VRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKALRVEARVVELLKSKFAAGF 224          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: AB19B_PRUPE (Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.892e-21
Identity = 53/117 (45.30%), Postives = 62/117 (52.99%), Query Frame = 3
Query:   48 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKY 398
            T    +QD CVA     DG    G  CK P +    DF +SGLG  GNT N      T A   Q PG+N LGIS  R+D  P G  P H HP ASE+ LV++GT+  GFV SD   Y
Sbjct:   15 TSHASVQDFCVADYKAPDGPA--GYSCKKPAIVTVNDFVYSGLGIAGNTTNIFKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVVPFHTHPGASEVLLVVQGTIIAGFVASDNTPY 129          

HSP 2 Score: 28.8758 bits (63), Expect = 1.892e-21
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHF 463
            K+L KGD+ VF  GL+HF
Sbjct:  131 KTLKKGDIIVFPQGLLHF 148          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GER3_WHEAT (Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.653e-21
Identity = 58/113 (51.33%), Postives = 71/113 (62.83%), Query Frame = 3
Query:   48 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTS 383
            ++P  LQD CVA  D K  V VNG  CK P     +DF FS  L K GNT+   G   TD NV + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S
Sbjct:   24 SNPHPLQDFCVADLDGK-AVSVNGHMCK-PMSEAGDDFLFSSKLAKAGNTSTPNGSAVTDLNVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGS 134          
The following BLAST results are available for this feature:
BLAST of EY702206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
NEC1_NICPL8.499e-2655.86Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE... [more]
NEC1_NICLS3.175e-2555.86Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]
GL51_ORYSJ5.377e-2556.41Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GL14_ORYSJ1.185e-2453.91Germin-like protein 1-4 OS=Oryza sativa subsp. jap... [more]
GLT2_ARATH8.030e-2347.97Germin-like protein subfamily T member 2 OS=Arabid... [more]
GLT1_ARATH8.030e-2347.15Germin-like protein subfamily T member 1 OS=Arabid... [more]
GL11_ARATH5.072e-2242.50Germin-like protein subfamily 1 member 1 OS=Arabid... [more]
GER2_WHEAT1.488e-2137.75Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 S... [more]
AB19B_PRUPE1.892e-2145.30Auxin-binding protein ABP19b OS=Prunus persica GN=... [more]
GER3_WHEAT5.653e-2151.33Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 S... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-C05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702206 ID=EY702206; Name=EY702206; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGGCCCTCTTGTCTTCGGCTTCTTCTTTGGCCTCTGCCACT
GACCCTGGCCATCTTCAAGATGTCTGTGTAGCCATCAATGACCCCAAGGA
TGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTTGCGAGAG
CAGAAGATTTCTTCTTCTCAGGGCTAGGCAAGCCTGGAAACACAGCAAAT
CGACTTGGTGTTGATGAAACAGATGCAAATGTTGAGCAAATTCCAGGACT
CAACACCCTTGGCATATCAGCATTCCGTATTGACTATGCACCATATGGCC
AAAGGCCACCTCACATTCACCCCCGTGCCAGCGAAATCTTCTTAGTCCTG
GAAGGAACTCTTTATGTCGGTTTTGTGACATCAGACCAACTGAAATACAC
ACTCATCGCAAAAGTCTAAATAAGGGAGATGTTTTTGTGTTCCACAANGG
TTTGATTCACTTCAATTCACATTGAAAAACAAATGCAGCTGCCTAATCTG
CTCTAAACAGCAATTCCCGGGGGAAATTACCATAACCGAACCAGTCTTTG
GAGCAATCCTTTATCAATCCCGATTTCCTTGGAAAGGTTTTCCGTTGGAC
CCAAAATATGGAAAAATCTTCCAAATAAGTTCTTTATGGGGTATTGGGGA
AAGGGATTTTGGGGCTTTAATATAAAGGGCCCTTCCCAAAGGGGTGGTTA
CTTTTATCCCCAAAATTCTTTTTTTTTTTAATGGATAAAAAAAGGGCTCT
CTGAACCCCTCTCCCGGGGGGGGGGGGGCGGGGATAAAAAAAATTGTTTT
TGTTTTTTTTTCGCCGCAAAAAAAAAAAAGAGCCACACCCCCACAGAAAA
AGAAAAAACAGG
back to top