EY702206

Overview
NameEY702206
Unique NameEY702206
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 7.051e-21
Identity = 52/112 (46.43%), Postives = 61/112 (54.46%), Query Frame = 3
Query:   63 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKY 398
            +QD CVA     DG    G  CK P      DF +SGLG  GNT N +    T A   Q PG+N LGIS  R+D  P G  P H HP ASE+ LV++GT+  GFV SD   Y
Sbjct:   20 VQDFCVADYKAPDGPA--GYSCKKPAKVTINDFVYSGLGIAGNTTNIIKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAGFVASDNTPY 129          

HSP 2 Score: 28.8758 bits (63), Expect = 7.051e-21
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHF 463
            K+L KGD+ VF  GL+HF
Sbjct:  131 KTLKKGDIMVFPQGLLHF 148          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.806e-20
Identity = 75/204 (36.76%), Postives = 107/204 (52.45%), Query Frame = 3
Query:   48 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAKV*IR--EMFLCSTXV*FTSIHIEK-QMQLPNLL*TAIPGGNYHNRTSLWSN-PLSIPISLERFSVGPKIWKNLPNKFFMGY 644
            +DP  LQD CVA  D K  V VNG  CK P     +DF FS  L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPH+HPRA+EI +V++G L VG + S      L ++V +R  E FL    +     ++ K +  +     +  PG  +   T   SN P+  P+  +   V   + + L +KF  G+
Sbjct:   24 SDPDPLQDFCVADLDGK-AVSVNGHPCK-PMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHVHPRATEIGIVMKGELLVGILGSLDSGNKLYSRV-VRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKALRVEAGVVELLKSKFAAGF 224          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.664e-20
Identity = 57/113 (50.44%), Postives = 71/113 (62.83%), Query Frame = 3
Query:   48 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTS 383
            +DP  LQD CVA  D K  V VNG  CK P     +DF FS  L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S
Sbjct:    1 SDPDPLQDFCVADLDGK-AVSVNGHTCK-PMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGS 111          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL12_ORYSJ (Germin-like protein 1-2 OS=Oryza sativa subsp. japonica GN=Os01g0705100 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.819e-19
Identity = 54/129 (41.86%), Postives = 75/129 (58.14%), Query Frame = 3
Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAKV*IREMFL 437
            D   LQD+CVA  D +    V+G  CK      ++DFF   + +  +T+N  GV+ T A V   PGLNTLG+S  R D AP G  PPH HPRASE+ LVL G + VGF T+    ++ + +   +E+F+
Sbjct:   30 DSPPLQDICVA--DLRAATAVDGFPCKPTASVVSDDFFCDAIVQAPSTSNPFGVNSTRATVSAFPGLNTLGLSITRTDLAPGGLNPPHSHPRASELVLVLSGEVMVGFTTAANRLFSKVVRE--KELFV 154          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL34_ORYSJ (Putative germin-like protein 3-4 OS=Oryza sativa subsp. japonica GN=Os03g0693800 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.026e-19
Identity = 72/205 (35.12%), Postives = 106/205 (51.71%), Query Frame = 3
Query:   48 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAKV*IR--EMFLCSTXV*FTSIHIEK-QMQLPNLL*TAIPGGNYHNRTSLWSN-PLSIPISLERFSVGPKIWKNLPNKFFMGY 644
            TD   LQD CVA  D K  V VNG  CK P  A  ++F FS     G    AN  G + T+ +V + PG+NTLG+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +  +     +KV +R  E F+    +     ++ K +  +     +  PG  +   T   SN P+  P+ ++   V   + + L +KF  GY
Sbjct:   29 TDADPLQDFCVADLDSK--VTVNGHACK-PASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDMGNRYYSKV-VRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDTGVVELLKSKFTGGY 229          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL33_ARATH (Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana GN=GER3 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.354e-18
Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = 3
Query:   63 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKY 398
            +QD CVA  DPK     +G  CK+P      DF F+GLG  GNT+N +    T A      G+N LG+S  R+D A  G  P H HP ASE+ +V++GT+  GF++S    Y
Sbjct:   22 VQDFCVA--DPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGNTSNIIKAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISSANKVY 131          

HSP 2 Score: 28.1054 bits (61), Expect = 1.354e-18
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHF 463
            K+LN+GD  VF  GL+HF
Sbjct:  133 KTLNRGDSMVFPQGLLHF 150          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL38_ORYSJ (Germin-like protein 3-8 OS=Oryza sativa subsp. japonica GN=Os03g0804700 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.757e-18
Identity = 51/118 (43.22%), Postives = 67/118 (56.78%), Query Frame = 3
Query:   51 DPGHLQDVCVAINDPKDGVFVN-------GKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTS 383
            DP  +QD CVA+  P+ G           G  CK      ++DFFF+GL    +T NR G + T AN E  PGLNTLG+S  R+D AP G  P H HPRA+E+  V+ G +  GFV++
Sbjct:   26 DPEPVQDFCVAVV-PRAGDAAAAACPAYPGFPCKPASTVVSDDFFFAGLAVASDTDNRFGFNVTAANAETFPGLNTLGVSIGRVDLAPGGVNPLHSHPRATELIHVVAGRVLAGFVST 142          

HSP 2 Score: 23.483 bits (49), Expect = 1.757e-18
Identity = 9/20 (45.00%), Postives = 13/20 (65.00%), Query Frame = 2
Query:  404 HRKSLNKGDVFVFHXGLIHF 463
            + K L +G+ FV   G+IHF
Sbjct:  147 YSKVLGEGETFVVPRGMIHF 166          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GLP1_SINAL (Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.761e-18
Identity = 49/112 (43.75%), Postives = 63/112 (56.25%), Query Frame = 3
Query:   63 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKY 398
            +QD CVA  DPK     +G  CK+P      DF FSGLGK GNT+N +    T A      GLN L +S  R+D A  G  P H HP ASE+ +V++GT+  GF++S    Y
Sbjct:   22 VQDFCVA--DPKGPQNPSGYSCKNPDQVTENDFAFSGLGKAGNTSNVIKAAVTPAFAPAFAGLNGLDVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISSANKVY 131          

HSP 2 Score: 26.1794 bits (56), Expect = 1.761e-18
Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHF 463
            K+L++GD  VF  GL+HF
Sbjct:  133 KTLSRGDSMVFPQGLLHF 150          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL31_ARATH (Germin-like protein subfamily 3 member 1 OS=Arabidopsis thaliana GN=GLP1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.762e-18
Identity = 53/117 (45.30%), Postives = 63/117 (53.85%), Query Frame = 3
Query:   63 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAK 413
            +QD CVA  + K      G  C  P   +A DF FSGLG PGNT N +    T A   Q PGLN LG+S  R+D AP G  P H HP ASE+  VL G++  GFV+S    Y    K
Sbjct:   19 VQDFCVA--NLKRAETPAGYPCIRPIHVKATDFVFSGLGTPGNTTNIINAAVTPAFAAQFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITAGFVSSANAVYVQTLK 133          

HSP 2 Score: 23.0978 bits (48), Expect = 1.762e-18
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHF 463
            ++L  G V VF  GL+HF
Sbjct:  130 QTLKPGQVMVFPQGLLHF 147          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL36_ORYSJ (Germin-like protein 3-6 OS=Oryza sativa subsp. japonica GN=Os03g0694000 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.011e-18
Identity = 72/205 (35.12%), Postives = 105/205 (51.22%), Query Frame = 3
Query:   48 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAKV*IR--EMFLCSTXV*FTSIHIEK-QMQLPNLL*TAIPGGNYHNRTSLWSN-PLSIPISLERFSVGPKIWKNLPNKFFMGY 644
            TD   LQD CVA  D K  V VNG  CK P  A  ++F FS     G    AN  G + T+ +V + PG+NTLG+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +        +KV +R  E F+    +     ++ K +  +     +  PG  +   T   SN P+  P+ ++   V   + + L +KF  GY
Sbjct:   29 TDADPLQDFCVADLDSK--VTVNGHACK-PASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKV-VRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKFTGGY 229          
The following BLAST results are available for this feature:
BLAST of EY702206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
AB19A_PRUPE7.051e-2146.43Auxin-binding protein ABP19a OS=Prunus persica GN=... [more]
OXO2_HORVU2.806e-2036.76Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1[more]
OXO1_HORVU3.664e-2050.44Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]
GL12_ORYSJ1.819e-1941.86Germin-like protein 1-2 OS=Oryza sativa subsp. jap... [more]
GL34_ORYSJ9.026e-1935.12Putative germin-like protein 3-4 OS=Oryza sativa s... [more]
GL33_ARATH1.354e-1841.96Germin-like protein subfamily 3 member 3 OS=Arabid... [more]
GL38_ORYSJ1.757e-1843.22Germin-like protein 3-8 OS=Oryza sativa subsp. jap... [more]
GLP1_SINAL1.761e-1843.75Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2... [more]
GL31_ARATH1.762e-1845.30Germin-like protein subfamily 3 member 1 OS=Arabid... [more]
GL36_ORYSJ2.011e-1835.12Germin-like protein 3-6 OS=Oryza sativa subsp. jap... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-C05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702206 ID=EY702206; Name=EY702206; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGGCCCTCTTGTCTTCGGCTTCTTCTTTGGCCTCTGCCACT
GACCCTGGCCATCTTCAAGATGTCTGTGTAGCCATCAATGACCCCAAGGA
TGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTTGCGAGAG
CAGAAGATTTCTTCTTCTCAGGGCTAGGCAAGCCTGGAAACACAGCAAAT
CGACTTGGTGTTGATGAAACAGATGCAAATGTTGAGCAAATTCCAGGACT
CAACACCCTTGGCATATCAGCATTCCGTATTGACTATGCACCATATGGCC
AAAGGCCACCTCACATTCACCCCCGTGCCAGCGAAATCTTCTTAGTCCTG
GAAGGAACTCTTTATGTCGGTTTTGTGACATCAGACCAACTGAAATACAC
ACTCATCGCAAAAGTCTAAATAAGGGAGATGTTTTTGTGTTCCACAANGG
TTTGATTCACTTCAATTCACATTGAAAAACAAATGCAGCTGCCTAATCTG
CTCTAAACAGCAATTCCCGGGGGAAATTACCATAACCGAACCAGTCTTTG
GAGCAATCCTTTATCAATCCCGATTTCCTTGGAAAGGTTTTCCGTTGGAC
CCAAAATATGGAAAAATCTTCCAAATAAGTTCTTTATGGGGTATTGGGGA
AAGGGATTTTGGGGCTTTAATATAAAGGGCCCTTCCCAAAGGGGTGGTTA
CTTTTATCCCCAAAATTCTTTTTTTTTTTAATGGATAAAAAAAGGGCTCT
CTGAACCCCTCTCCCGGGGGGGGGGGGGCGGGGATAAAAAAAATTGTTTT
TGTTTTTTTTTCGCCGCAAAAAAAAAAAAGAGCCACACCCCCACAGAAAA
AGAAAAAACAGG
back to top