EY702206

Overview
NameEY702206
Unique NameEY702206
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GLT3_ARATH (Germin-like protein subfamily T member 3 OS=Arabidopsis thaliana GN=At1g74820 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.969e-18
Identity = 52/117 (44.44%), Postives = 70/117 (59.83%), Query Frame = 3
Query:   66 QDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAKV 416
            QD CVA  D +     +G  CK      +EDFF+SGL  P NT+N  G+    AN+   PGLNTLGIS + +  AP G   PH HP  +E  +V+EG++ VGF+T++   YTL +KV
Sbjct:   41 QDFCVA--DLQATPTNSGYPCKSQ--VTSEDFFYSGLNTPLNTSNPKGIAANPANLLTFPGLNTLGISMYNVAIAPGGYNQPHSHPGVTEAGVVIEGSVLVGFLTTN---YTLYSKV 150          

HSP 2 Score: 24.6386 bits (52), Expect = 2.969e-18
Identity = 10/28 (35.71%), Postives = 15/28 (53.57%), Query Frame = 2
Query:  389 TEIHTHRKSLNKGDVFVFHXGLIHFNSH 472
            T    + K +  GD+FV   GLIH+  +
Sbjct:  142 TNYTLYSKVIGPGDMFVIPPGLIHYEGN 169          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL35_ORYSJ (Germin-like protein 3-5 OS=Oryza sativa subsp. japonica GN=Os03g0693900 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.479e-18
Identity = 71/205 (34.63%), Postives = 104/205 (50.73%), Query Frame = 3
Query:   48 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAKV*IR--EMFLCSTXV*FTSIHIEK-QMQLPNLL*TAIPGGNYHNRTSLWSN-PLSIPISLERFSVGPKIWKNLPNKFFMGY 644
            TD   LQD CVA  D    V VNG  CK P  A  ++F FS     G    AN  G + T+ +V + PG+NTLG+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +        +KV +R  E F+    +     ++ K +  +     +  PG  +   T   SN P+  P+ ++   V   + + L +KF  GY
Sbjct:   27 TDADPLQDFCVA--DLNSEVTVNGHACK-PASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKV-VRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKFTGGY 227          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: ABP20_PRUPE (Auxin-binding protein ABP20 OS=Prunus persica GN=ABP20 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.641e-18
Identity = 52/112 (46.43%), Postives = 63/112 (56.25%), Query Frame = 3
Query:   63 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKY 398
            +QD CVA     +G    G  CK P   +  DF FSGLG  GNT+N +    T A V Q PG+N LGIS  R+D A  G  P H HP ASE+ +V +GT+  GFV SD   Y
Sbjct:   25 VQDFCVADLAAPEGPA--GFSCKKPASVKVNDFVFSGLGIAGNTSNIIKAAVTPAFVAQFPGVNGLGISIARLDLAVGGVVPFHTHPGASEVLIVAQGTICAGFVASDNTPY 134          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.303e-17
Identity = 49/123 (39.84%), Postives = 69/123 (56.10%), Query Frame = 3
Query:   51 DPGHLQDVCVAINDPKDGVFVNGKF----CKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLI 407
            DP  +QD CVA+  P+ G   +  +    CK      ++DFFF+GL   G+T N  G      NVE  P LNTLG++  R+D AP G  P H HPRA+E+  V+ G + VGFV++    Y+ +
Sbjct:   36 DPEPIQDFCVAV--PRAGGEASPAYPGFPCKPASAVVSDDFFFAGLAAAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAELVHVITGRMLVGFVSTAGKYYSKV 156          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL34_ARATH (Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana GN=At5g61750 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.439e-17
Identity = 45/122 (36.89%), Postives = 69/122 (56.56%), Query Frame = 3
Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFV-TSDQLKYTLIAK 413
            D  ++QD C      +   F+NG  CK+P    A+DF  + L + G+T N L  + T     + PGLNTLG+S  R D    G  P H HPR+SE+  V++G ++ GFV T++++  T++ K
Sbjct:   19 DSDNMQDTCPTAPGEQSIFFINGYPCKNPTKITAQDFKSTKLTEAGDTDNYLQSNVTLLTALEFPGLNTLGLSVSRTDLERDGSVPFHSHPRSSEMLFVVKGVVFAGFVDTNNKIFQTVLQK 140          

HSP 2 Score: 29.261 bits (64), Expect = 1.439e-17
Identity = 12/16 (75.00%), Postives = 13/16 (81.25%), Query Frame = 2
Query:  416 LNKGDVFVFHXGLIHF 463
            L KGDVFVF  GL+HF
Sbjct:  138 LQKGDVFVFPKGLLHF 153          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GLP1_IPONI (Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.870e-17
Identity = 49/112 (43.75%), Postives = 62/112 (55.36%), Query Frame = 3
Query:   63 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKY 398
            + D CVA N P      +G  CK+     A DF +SGL KPGNT N +    T A V Q PG+  LG++  R+D AP G  P H HP ASEI  V+EGT+   F++S    Y
Sbjct:   24 VNDFCVA-NGPGARDTPSGFVCKNTAKVTAADFVYSGLAKPGNTTNIINAAVTPAFVGQFPGVIGLGVTLARLDLAPGGVIPMHTHPGASEILNVVEGTILAAFISSGNKVY 134          

HSP 2 Score: 23.483 bits (49), Expect = 1.870e-17
Identity = 10/20 (50.00%), Postives = 13/20 (65.00%), Query Frame = 2
Query:  404 HRKSLNKGDVFVFHXGLIHF 463
            + K+L  GDV VF  GL+ F
Sbjct:  134 YEKALYPGDVMVFPQGLLDF 153          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL33_ORYSJ (Germin-like protein 3-3 OS=Oryza sativa subsp. japonica GN=Os03g0693700 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.792e-17
Identity = 53/112 (47.32%), Postives = 66/112 (58.93%), Query Frame = 3
Query:   51 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNT-ANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTS 383
            DP  LQD CVA  D +  V +NG  CK    A  E  F S L   G+  AN  G + T  +V   PG+NTLG+S  RID+AP G  PPH+HPRA+E+ +VL G L VG + S
Sbjct:   28 DPDPLQDFCVADLDSE--VTLNGYPCKPTPAAGDEFLFSSRLATGGDVNANPNGSNVTQLDVAGWPGVNTLGVSMNRIDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGS 137          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL111_ORYSJ (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica GN=Os11g0537300 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.348e-16
Identity = 44/109 (40.37%), Postives = 54/109 (49.54%), Query Frame = 3
Query:   48 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGF 374
            +D   LQDVC      +  +F+NG FCK P    A DF    L   G+  N +          + PGLNTLGIS  R D A  G   PH HPRASE+  V  G++  GF
Sbjct:   23 SDSPPLQDVCPMAPQGERKLFMNGFFCKSPSTIMASDFKTLLLNHAGDLDNMVRSSANIITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGF 131          

HSP 2 Score: 29.6462 bits (65), Expect = 3.348e-16
Identity = 11/19 (57.89%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  407 RKSLNKGDVFVFHXGLIHF 463
            +K+L +GDVF+F  GL+HF
Sbjct:  140 QKTLAEGDVFIFPRGLVHF 158          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GLP1_BRANA (Germin-like protein 1 OS=Brassica napus GN=GER1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.357e-16
Identity = 51/117 (43.59%), Postives = 62/117 (52.99%), Query Frame = 3
Query:   63 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLIAK 413
            +QD CVA  + K      G  C  P   +A DF FS LG PGNT N +    T   V Q P LN LGIS  R+D AP G  P H HP ASE+  VL+G++  GF++S    Y    K
Sbjct:   19 VQDFCVA--NLKRAETPAGYPCIRPIHVKASDFVFS-LGTPGNTTNIISAAVTPGFVAQFPALNGLGISTARLDLAPKGVIPMHTHPGASEVLFVLDGSITAGFISSANSVYVQTLK 132          

HSP 2 Score: 23.0978 bits (48), Expect = 3.357e-16
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  410 KSLNKGDVFVFHXGLIHF 463
            ++L  G V VF  GL+HF
Sbjct:  129 QTLKPGQVMVFPQGLLHF 146          
BLAST of EY702206 vs. ExPASy Swiss-Prot
Match: GL32_ARATH (Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.613e-15
Identity = 48/123 (39.02%), Postives = 61/123 (49.59%), Query Frame = 3
Query:   48 TDPGHLQDVCVA--INDP-KDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLKYTLI 407
            +DP  +QD C+   +  P  D  F     CK+      EDF FSGL   GN     G        E  PGLNTLGIS  R D  P    PPH HPRA+E+  +++G +Y GFV S+   Y  +
Sbjct:   25 SDPDPIQDFCIPKPVTSPYHDHHFSTNLPCKNSSEVTTEDFVFSGLKTAGNFTET-GFATVPVGPENFPGLNTLGISFVRADLKPGSINPPHYHPRATEVAHLVKGRVYSGFVDSNNKVYAKV 146          

HSP 2 Score: 22.7126 bits (47), Expect = 1.613e-15
Identity = 7/20 (35.00%), Postives = 14/20 (70.00%), Query Frame = 2
Query:  404 HRKSLNKGDVFVFHXGLIHF 463
            + K + +G++ V+  GL+HF
Sbjct:  143 YAKVMEEGEMMVYPKGLVHF 162          
The following BLAST results are available for this feature:
BLAST of EY702206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
GLT3_ARATH2.969e-1844.44Germin-like protein subfamily T member 3 OS=Arabid... [more]
GL35_ORYSJ4.479e-1834.63Germin-like protein 3-5 OS=Oryza sativa subsp. jap... [more]
ABP20_PRUPE7.641e-1846.43Auxin-binding protein ABP20 OS=Prunus persica GN=A... [more]
GL37_ORYSJ1.303e-1739.84Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]
GL34_ARATH1.439e-1736.89Germin-like protein subfamily 3 member 4 OS=Arabid... [more]
GLP1_IPONI1.870e-1743.75Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=... [more]
GL33_ORYSJ3.792e-1747.32Germin-like protein 3-3 OS=Oryza sativa subsp. jap... [more]
GL111_ORYSJ3.348e-1640.37Germin-like protein 11-1 OS=Oryza sativa subsp. ja... [more]
GLP1_BRANA3.357e-1643.59Germin-like protein 1 OS=Brassica napus GN=GER1 PE... [more]
GL32_ARATH1.613e-1539.02Germin-like protein subfamily 3 member 2 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-C05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702206 ID=EY702206; Name=EY702206; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGGCCCTCTTGTCTTCGGCTTCTTCTTTGGCCTCTGCCACT
GACCCTGGCCATCTTCAAGATGTCTGTGTAGCCATCAATGACCCCAAGGA
TGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTTGCGAGAG
CAGAAGATTTCTTCTTCTCAGGGCTAGGCAAGCCTGGAAACACAGCAAAT
CGACTTGGTGTTGATGAAACAGATGCAAATGTTGAGCAAATTCCAGGACT
CAACACCCTTGGCATATCAGCATTCCGTATTGACTATGCACCATATGGCC
AAAGGCCACCTCACATTCACCCCCGTGCCAGCGAAATCTTCTTAGTCCTG
GAAGGAACTCTTTATGTCGGTTTTGTGACATCAGACCAACTGAAATACAC
ACTCATCGCAAAAGTCTAAATAAGGGAGATGTTTTTGTGTTCCACAANGG
TTTGATTCACTTCAATTCACATTGAAAAACAAATGCAGCTGCCTAATCTG
CTCTAAACAGCAATTCCCGGGGGAAATTACCATAACCGAACCAGTCTTTG
GAGCAATCCTTTATCAATCCCGATTTCCTTGGAAAGGTTTTCCGTTGGAC
CCAAAATATGGAAAAATCTTCCAAATAAGTTCTTTATGGGGTATTGGGGA
AAGGGATTTTGGGGCTTTAATATAAAGGGCCCTTCCCAAAGGGGTGGTTA
CTTTTATCCCCAAAATTCTTTTTTTTTTTAATGGATAAAAAAAGGGCTCT
CTGAACCCCTCTCCCGGGGGGGGGGGGGCGGGGATAAAAAAAATTGTTTT
TGTTTTTTTTTCGCCGCAAAAAAAAAAAAGAGCCACACCCCCACAGAAAA
AGAAAAAACAGG
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