EY702201

Overview
NameEY702201
Unique NameEY702201
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 2.220e-25
Identity = 43/61 (70.49%), Postives = 52/61 (85.25%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQ 246
            KG RTGW  MSRNWG NWQSN YL+GQSLSFKVT+SDG+T+T  +VAPA W+FG+T+S +Q
Sbjct:  198 KGSRTGWMAMSRNWGVNWQSNAYLDGQSLSFKVTSSDGQTLTFLDVAPAGWTFGQTFSTSQ 258          

HSP 2 Score: 38.1206 bits (87), Expect = 2.220e-25
Identity = 17/29 (58.62%), Postives = 23/29 (79.31%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKGSQ-NWLA 86
            F LVL++NVGG G + +VSIKGS+  W+A
Sbjct:  178 FELVLVSNVGGVGSIQSVSIKGSRTGWMA 206          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.760e-25
Identity = 43/63 (68.25%), Postives = 49/63 (77.78%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQFR 252
            KG  TGW PMSRNWGQNWQSN+ L GQ+LSF+VT SD RT TS+N APA W FG+T+ G  FR
Sbjct:  201 KGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGWHFGQTFEGKNFR 263          

HSP 2 Score: 37.7354 bits (86), Expect = 3.760e-25
Identity = 18/28 (64.29%), Postives = 21/28 (75.00%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKG-SQNWL 83
            FNLVLITNV GAGD+   S+KG S  W+
Sbjct:  181 FNLVLITNVAGAGDIVRASVKGTSTGWM 208          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.896e-25
Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQFR 252
            KG  T W  +SRNWGQNWQSN  L GQSLSF+V TSDGR+ TS N+AP++W FG+TYSG  FR
Sbjct:  195 KGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQTYSGKNFR 257          

HSP 2 Score: 40.4318 bits (93), Expect = 4.896e-25
Identity = 20/28 (71.43%), Postives = 22/28 (78.57%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKGSQ-NWL 83
            FNLVL+TNV GAGDV  VS+KGS   WL
Sbjct:  175 FNLVLVTNVAGAGDVIKVSVKGSNTQWL 202          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.896e-25
Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 1
Query:   67 GLRTG--WQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 249
            G R G  WQPMSRNWGQNWQSN YL+G++LSF+VT  DGR++T  +VAPA W FG+T+ G QF
Sbjct:  197 GSRVGGRWQPMSRNWGQNWQSNAYLDGKALSFRVTAGDGRSLTCADVAPAGWQFGQTFEGRQF 259          

HSP 2 Score: 41.2022 bits (95), Expect = 4.896e-25
Identity = 17/23 (73.91%), Postives = 22/23 (95.65%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKGS 71
            FNLVL+TNVGGAGDV ++++KGS
Sbjct:  172 FNLVLVTNVGGAGDVRSLAVKGS 194          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.291e-25
Identity = 40/63 (63.49%), Postives = 51/63 (80.95%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQFR 252
            KG +TGW  ++RNWGQNWQSN  L GQSLSF+VT+SD RT TS+N+AP++W FG+T+ G  FR
Sbjct:  197 KGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVGKNFR 259          

HSP 2 Score: 39.2762 bits (90), Expect = 8.291e-25
Identity = 18/29 (62.07%), Postives = 23/29 (79.31%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKGSQ-NWLA 86
            FNLVLITNV GAGD+   S+KGS+  W++
Sbjct:  177 FNLVLITNVAGAGDIARTSVKGSKTGWMS 205          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.373e-24
Identity = 38/56 (67.86%), Postives = 45/56 (80.36%), Query Frame = 1
Query:   82 WQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 249
            WQ +SRNWGQNWQS   L+GQ+LSF+VTT DGR+V S N  P  WSFG+T+SGAQF
Sbjct:  235 WQALSRNWGQNWQSAALLDGQALSFRVTTGDGRSVVSNNAVPRGWSFGQTFSGAQF 290          

HSP 2 Score: 43.5134 bits (101), Expect = 2.373e-24
Identity = 18/25 (72.00%), Postives = 23/25 (92.00%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKGSQN 77
            FNLVL+TNVGGAGDVHAV++K  ++
Sbjct:  208 FNLVLVTNVGGAGDVHAVAVKSERS 232          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.378e-24
Identity = 39/61 (63.93%), Postives = 48/61 (78.69%), Query Frame = 1
Query:   67 GLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 249
            G +  WQ M+RNWGQNWQS   L+GQ+LSF VTT D R+V SYNVAPA W+FG+T++G QF
Sbjct:  203 GRKARWQAMARNWGQNWQSGALLDGQALSFTVTTGDRRSVVSYNVAPAGWAFGQTFTGRQF 263          

HSP 2 Score: 41.2022 bits (95), Expect = 2.378e-24
Identity = 17/21 (80.95%), Postives = 21/21 (100.00%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIK 65
            FNLVL++NVGGAGDVHAV++K
Sbjct:  179 FNLVLVSNVGGAGDVHAVAVK 199          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 5.244e-24
Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQFR 252
            KG RTGW  +SRNWGQNWQSN  L GQ+LSF+VT SD RT TS+N+ P++W FG+T+ G  FR
Sbjct:  194 KGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVGKNFR 256          

HSP 2 Score: 38.891 bits (89), Expect = 5.244e-24
Identity = 18/29 (62.07%), Postives = 23/29 (79.31%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKGSQ-NWLA 86
            FNLVLITNV GAGD+   S+KGS+  W++
Sbjct:  174 FNLVLITNVAGAGDIVRASVKGSRTGWMS 202          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.235e-22
Identity = 39/62 (62.90%), Postives = 48/62 (77.42%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 249
            KG RTGW PM RNWGQNW  N  L  Q+LSF+VT+SD  TVTSYNV+P +W++G+T+ G QF
Sbjct:  202 KGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNWNYGQTFEGKQF 263          

HSP 2 Score: 35.039 bits (79), Expect = 1.235e-22
Identity = 18/28 (64.29%), Postives = 21/28 (75.00%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKGSQ-NWL 83
            F  VLITNV G+GD+ AV IKGS+  WL
Sbjct:  182 FISVLITNVAGSGDIAAVKIKGSRTGWL 209          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.724e-22
Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYS 237
            KG +TGW  MSRNWG NWQSN YL+GQ+LSF +TT+DG T    NV P+SWSFG+ YS
Sbjct:  190 KGSKTGWLAMSRNWGANWQSNAYLDGQALSFSITTTDGATRVFLNVVPSSWSFGQIYS 247          

HSP 2 Score: 36.965 bits (84), Expect = 2.724e-22
Identity = 19/29 (65.52%), Postives = 22/29 (75.86%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKGSQ-NWLA 86
            F LV I NVGGAG + +VSIKGS+  WLA
Sbjct:  170 FELVNIQNVGGAGSIKSVSIKGSKTGWLA 198          
The following BLAST results are available for this feature:
BLAST of EY702201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
EXPA1_ORYSJ2.220e-2570.49Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA7_ORYSJ3.760e-2568.25Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA9_ARATH4.896e-2566.67Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 ... [more]
EXPA6_ORYSJ4.896e-2565.08Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP16_ARATH8.291e-2563.49Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=... [more]
EXPA5_ORYSJ2.373e-2467.86Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP21_ORYSJ2.378e-2463.93Expansin-A21 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA4_ARATH5.244e-2463.49Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 ... [more]
EXP13_ARATH1.235e-2262.90Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=... [more]
EXP11_ARATH2.724e-2265.52Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-B12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702201 ID=EY702201; Name=EY702201; organism=Citrus sinensis; type=EST; length=857bp
ACTTCAACCTTGTCCTGATCACCAACGTTGGTGGTGCTGGTGATGTTCAT
GCTGTTTCAATCAAAGGGTCTCAGAACTGGCTGGCAGCCCATGTCAAGAA
ACTGGGGCCAAAACTGGCAAAGCAACACTTATCTCAATGGCCAAAGCCTG
TCATTTAAGGTCACCACAAGCGATGGCCGCACTGTGACTTCCTACAATGT
TGCCCCTGCTAGCTGGTCCTTTGGCCGAACTTACTCCGGTGCTCAATTCC
GCTAGAGCCACCAAGACCATTAGAGATTGGGTTTTAACACCTTTTTTAGC
TAAATATTCGTGTACTAAGTAGCATATTTTAGTATGAAATTTTAGCATAC
TAGGGTATATATATATATATATAATATAGAAGTAGCTAATGTGGCTAGTT
TTTGGCTTCCAGCGTCAAAAATGAAAAAAGGGGCTTATTTTAAAATGGCT
TATTTNTTTTCATTTTGAATCTATCTTTATGGTTTCAGTGGGGTGCCGAC
ATATGGGAACCTCATATCCCGTTGGAGATCCCTTTTTTAACTTTTGTTTT
TGCGGGGTTCTGCCTCCACTCTACCCACTGTCTAAGTGGAAAAATTTCCA
CCCACCAATATGCGTTGAACATCCCGCTCTCCACACTCTCTGATCTTCTT
TAGCATTGCTTGCCACAAAGCCATTTTCCCAATCGCCGTATAACTCTTGA
CTACAAATTCAATCTAAGACCTATATCCCCCCCACTTCCAGCCTCACATC
AAATCACTCCTCGCGCCGTACCACCTAGCCCTCTTCACCATACTTCCTAA
GATGCAGCTTTCAACGGCTAACAACTCCTCAACTGCGGGTCCTCTTACGA
CACCGAA
back to top