EY702201

Overview
NameEY702201
Unique NameEY702201
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.015e-21
Identity = 40/58 (68.97%), Postives = 44/58 (75.86%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYS 237
            KG  TGW  MSRNWG NWQSN YL GQSLSF V   DGR VT++NVAP++W FG TYS
Sbjct:  192 KGSNTGWMAMSRNWGANWQSNAYLAGQSLSFIVQLDDGRKVTAWNVAPSNWFFGATYS 249          

HSP 2 Score: 34.2686 bits (77), Expect = 1.015e-21
Identity = 17/29 (58.62%), Postives = 21/29 (72.41%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKGSQ-NWLA 86
            F LV +TNVGG+G V  +SIKGS   W+A
Sbjct:  172 FELVTVTNVGGSGVVAQMSIKGSNTGWMA 200          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.718e-21
Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 249
            KG  +GW  M RNWGQ W  N+   GQ LSF++T+SDG+T+T+YNV P  W FG+TY+G QF
Sbjct:  194 KGTESGWLSMGRNWGQIWHINSDFRGQPLSFELTSSDGKTLTNYNVVPKEWDFGKTYTGKQF 255          

HSP 2 Score: 37.3502 bits (85), Expect = 1.718e-21
Identity = 18/29 (62.07%), Postives = 24/29 (82.76%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKGSQN-WLA 86
            F  VLI+NVGGAGDV +V IKG+++ WL+
Sbjct:  174 FLTVLISNVGGAGDVRSVKIKGTESGWLS 202          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.932e-21
Identity = 46/63 (73.02%), Postives = 51/63 (80.95%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQFR 252
            KG  T WQ MSRNWGQNWQSN  L+GQ+LSFKVTTSDGRTV S N  P +WSFG+TY+G QFR
Sbjct:  190 KGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTGKQFR 252          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.237e-21
Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYS 237
            KG +T W  MSRNWGQNWQSN YLN QSLSFKV   D R VT +N+AP++W+FG TY+
Sbjct:  186 KGSKTDWMAMSRNWGQNWQSNAYLNTQSLSFKVKLDDAREVTVWNIAPSNWNFGTTYT 243          

HSP 2 Score: 33.4982 bits (75), Expect = 2.237e-21
Identity = 17/29 (58.62%), Postives = 22/29 (75.86%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKGSQ-NWLA 86
            F LV + NVGG+G V  VSIKGS+ +W+A
Sbjct:  166 FELVTVFNVGGSGVVAQVSIKGSKTDWMA 194          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.909e-21
Identity = 42/63 (66.67%), Postives = 47/63 (74.60%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTY-SGAQF 249
            KG  TGW  MSRNWG NWQSN  L+GQ+LSF+V   DGR VT+ +VAPA WSFG TY S AQF
Sbjct:  188 KGSGTGWMAMSRNWGANWQSNARLDGQALSFRVQADDGRVVTAADVAPAGWSFGATYTSSAQF 250          

HSP 2 Score: 33.4982 bits (75), Expect = 2.909e-21
Identity = 17/29 (58.62%), Postives = 21/29 (72.41%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKGS-QNWLA 86
            F LVL+TNVGG+G V  + IKGS   W+A
Sbjct:  168 FELVLVTNVGGSGAVAQMWIKGSGTGWMA 196          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.789e-20
Identity = 44/63 (69.84%), Postives = 53/63 (84.13%), Query Frame = 1
Query:   64 KGLRT-GWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 249
            KG +T  WQ MSRNWGQNWQSN+Y+N QSLSF+VTTSDGRT+ S +VAP++W FG+TY G QF
Sbjct:  191 KGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTYQGGQF 253          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.155e-19
Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTY 234
            KG  T W  MSRNWG+NWQSN YL GQ+LSF+V   DG  VT+Y+VAPA+W FG TY
Sbjct:  190 KGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQADDGGVVTAYDVAPANWQFGSTY 246          

HSP 2 Score: 30.8018 bits (68), Expect = 1.155e-19
Identity = 15/29 (51.72%), Postives = 20/29 (68.97%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKGS-QNWLA 86
            + LVL+TNV G+G V A  +KGS   WL+
Sbjct:  170 YELVLVTNVAGSGAVAAAWVKGSGTEWLS 198          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.952e-19
Identity = 38/62 (61.29%), Postives = 44/62 (70.97%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 249
            KG RTGW PM RNWGQNWQ +  L GQ LSF+VT   GRTV +Y+VAP  W F +T+ G QF
Sbjct:  197 KGSRTGWIPMGRNWGQNWQCDADLRGQPLSFEVTGGRGRTVVAYSVAPPDWMFAQTFEGKQF 258          

HSP 2 Score: 29.261 bits (64), Expect = 1.952e-19
Identity = 15/28 (53.57%), Postives = 19/28 (67.86%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKGSQ-NWL 83
            F  VLITNV   G+V AV +KGS+  W+
Sbjct:  177 FLQVLITNVAADGEVAAVKVKGSRTGWI 204          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 4.028e-19
Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQFR 252
            KG  T W  MSRNWGQNWQSN+ L GQSLSF+VT+SD R+ TS+N+APA+W FG+T+ G  FR
Sbjct:  194 KGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQTFMGKNFR 256          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 7.725e-18
Identity = 31/61 (50.82%), Postives = 44/61 (72.13%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQ 246
            KG +TGW P++RNWG NWQ N+ L GQ+LSF+VT++ G+T+   +V P  W FG T++  Q
Sbjct:  191 KGSKTGWIPLARNWGANWQCNSALVGQALSFRVTSTGGQTLQINSVVPEWWEFGTTFTSNQ 251          

HSP 2 Score: 36.5798 bits (83), Expect = 7.725e-18
Identity = 17/28 (60.71%), Postives = 22/28 (78.57%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKGSQ-NWL 83
            F LVLITNV G+G V A+S+KGS+  W+
Sbjct:  171 FELVLITNVAGSGSVQAMSVKGSKTGWI 198          
The following BLAST results are available for this feature:
BLAST of EY702201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
EXPA3_ORYSJ1.015e-2168.97Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP10_ORYSJ1.718e-2156.45Expansin-A10 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP14_ARATH1.932e-2173.02Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=... [more]
EXP33_ORYSJ2.237e-2165.52Expansin-A33 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA8_ORYSJ2.909e-2166.67Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA8_ARATH2.789e-2069.84Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 ... [more]
EXPA9_ORYSJ1.155e-1964.91Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP16_ORYSJ1.952e-1961.29Expansin-A16 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA6_ARATH4.028e-1965.08Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 ... [more]
EXP28_ORYSJ7.725e-1850.82Expansin-A28 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-B12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702201 ID=EY702201; Name=EY702201; organism=Citrus sinensis; type=EST; length=857bp
ACTTCAACCTTGTCCTGATCACCAACGTTGGTGGTGCTGGTGATGTTCAT
GCTGTTTCAATCAAAGGGTCTCAGAACTGGCTGGCAGCCCATGTCAAGAA
ACTGGGGCCAAAACTGGCAAAGCAACACTTATCTCAATGGCCAAAGCCTG
TCATTTAAGGTCACCACAAGCGATGGCCGCACTGTGACTTCCTACAATGT
TGCCCCTGCTAGCTGGTCCTTTGGCCGAACTTACTCCGGTGCTCAATTCC
GCTAGAGCCACCAAGACCATTAGAGATTGGGTTTTAACACCTTTTTTAGC
TAAATATTCGTGTACTAAGTAGCATATTTTAGTATGAAATTTTAGCATAC
TAGGGTATATATATATATATATAATATAGAAGTAGCTAATGTGGCTAGTT
TTTGGCTTCCAGCGTCAAAAATGAAAAAAGGGGCTTATTTTAAAATGGCT
TATTTNTTTTCATTTTGAATCTATCTTTATGGTTTCAGTGGGGTGCCGAC
ATATGGGAACCTCATATCCCGTTGGAGATCCCTTTTTTAACTTTTGTTTT
TGCGGGGTTCTGCCTCCACTCTACCCACTGTCTAAGTGGAAAAATTTCCA
CCCACCAATATGCGTTGAACATCCCGCTCTCCACACTCTCTGATCTTCTT
TAGCATTGCTTGCCACAAAGCCATTTTCCCAATCGCCGTATAACTCTTGA
CTACAAATTCAATCTAAGACCTATATCCCCCCCACTTCCAGCCTCACATC
AAATCACTCCTCGCGCCGTACCACCTAGCCCTCTTCACCATACTTCCTAA
GATGCAGCTTTCAACGGCTAACAACTCCTCAACTGCGGGTCCTCTTACGA
CACCGAA
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