EY702201

Overview
NameEY702201
Unique NameEY702201
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.305e-17
Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 1
Query:   79 GWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQ 246
            GW  MSRNWG NWQS  YL+GQ LSF+VT +DG+T+    V P SW FG+T++  Q
Sbjct:  205 GWMAMSRNWGANWQSLAYLDGQGLSFRVTATDGQTIVFAGVVPPSWRFGQTFASTQ 260          

HSP 2 Score: 31.9574 bits (71), Expect = 1.305e-17
Identity = 14/31 (45.16%), Postives = 21/31 (67.74%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKGSQ---NWLA 86
            F LVL+TNV  AG V ++ ++GS+    W+A
Sbjct:  178 FELVLVTNVAAAGSVRSMEVRGSRRGAGWMA 208          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.698e-17
Identity = 38/62 (61.29%), Postives = 44/62 (70.97%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 249
            KG  T W PM+RNWGQNW S+  L GQSLSF+VT   G+T+ SY+VAP  W FG TY G QF
Sbjct:  193 KGHTTAWIPMARNWGQNWHSSLDLIGQSLSFEVTLKGGKTIASYDVAPPYWRFGMTYQGKQF 254          

HSP 2 Score: 24.2534 bits (51), Expect = 1.698e-17
Identity = 12/22 (54.55%), Postives = 15/22 (68.18%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKG 68
            F  VLI+NVG  G+V  V +KG
Sbjct:  173 FFQVLISNVGLDGEVVGVKVKG 194          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.870e-17
Identity = 33/61 (54.10%), Postives = 44/61 (72.13%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQ 246
            KG  TGW  ++RNWG NWQ N+ L GQ+LSF VT++ G+T+  YNV P+ WSFG T++  Q
Sbjct:  191 KGGSTGWITLNRNWGANWQCNSGLVGQALSFAVTSTGGQTLYIYNVVPSWWSFGMTFTSNQ 251          

HSP 2 Score: 33.8834 bits (76), Expect = 2.870e-17
Identity = 15/28 (53.57%), Postives = 21/28 (75.00%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIK-GSQNWL 83
            F LVL++NV G+G V +VS+K GS  W+
Sbjct:  171 FELVLVSNVAGSGSVRSVSVKGGSTGWI 198          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.296e-17
Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 1
Query:   73 RTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQ 246
            R  W P+ RNWGQ WQ++  L G+SL+F+V T D R  TS++V P  W FG TY   +
Sbjct:  209 RVKWTPLKRNWGQEWQTSEVLTGESLTFRVMTGDHRKATSWHVLPPDWQFGVTYQATK 266          

HSP 2 Score: 38.1206 bits (87), Expect = 6.296e-17
Identity = 15/24 (62.50%), Postives = 22/24 (91.67%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKGSQ 74
            FNLV+++NVGGAGDV  +S+KG++
Sbjct:  185 FNLVMVSNVGGAGDVAGLSVKGNK 208          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.307e-17
Identity = 32/51 (62.75%), Postives = 40/51 (78.43%), Query Frame = 1
Query:   82 WQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTY 234
            W+ MSRNWG N+QSNTYLNGQSLSFKV  SDG    + NV P++W FG+++
Sbjct:  199 WETMSRNWGANYQSNTYLNGQSLSFKVQLSDGSIKAALNVVPSNWRFGQSF 249          

HSP 2 Score: 31.5722 bits (70), Expect = 6.307e-17
Identity = 14/25 (56.00%), Postives = 19/25 (76.00%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKGSQN 77
            F LVLI+NV G G++  V IKGS++
Sbjct:  172 FELVLISNVAGGGEISKVWIKGSKS 196          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 6.309e-17
Identity = 34/58 (58.62%), Postives = 41/58 (70.69%), Query Frame = 1
Query:   82 WQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYS--GAQF 249
            W  M+RNWG NWQS+  L GQ LSFKVT +D +T T  NV P+SW FG+T+S  G QF
Sbjct:  194 WLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSWWFGQTFSSRGRQF 251          

HSP 2 Score: 35.8094 bits (81), Expect = 6.309e-17
Identity = 15/29 (51.72%), Postives = 23/29 (79.31%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKGS--QNWL 83
            FN+V+I+NVGG G V +V+++GS  + WL
Sbjct:  167 FNMVMISNVGGGGSVRSVAVRGSKGKTWL 195          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.385e-16
Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 1
Query:   61 SKGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSG 240
            +KG +T W  MSR WGQNW +N  L GQS+S +VTTSDG T    +V PASW FG+T+ G
Sbjct:  199 AKGSKTAWVVMSRYWGQNWTTNVNLTGQSVSLRVTTSDGITKDFTDVMPASWGFGQTFDG 258          

HSP 2 Score: 30.4166 bits (67), Expect = 1.385e-16
Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 3
Query:   12 VLITNVGGAGDVHAVSIKGSQ 74
            +L  NVGGAGD+ AVS KGS+
Sbjct:  183 ILPYNVGGAGDIIAVSAKGSK 203          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.802e-16
Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQ 246
            KG  TGW  MSRNWG NWQ    L GQ+LSF VT++ G+T+   +V PA WSFG+T+S  Q
Sbjct:  185 KGSSTGWIQMSRNWGANWQCLAGLAGQALSFTVTSTGGQTIVFDSVVPAGWSFGQTFSTYQ 245          

HSP 2 Score: 32.3426 bits (72), Expect = 1.802e-16
Identity = 13/28 (46.43%), Postives = 21/28 (75.00%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKGSQ-NWL 83
            F LVL+TN+ G+G + ++S+KGS   W+
Sbjct:  165 FELVLVTNMAGSGSIASMSVKGSSTGWI 192          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.444e-16
Identity = 37/65 (56.92%), Postives = 50/65 (76.92%), Query Frame = 1
Query:   58 QSKGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTY-SGAQF 249
            Q KG +TGW  MSRNWG NWQ+N YLN Q++SF VT++ G+T+   +VAP++W FG+T+ SG QF
Sbjct:  185 QIKGTKTGWVTMSRNWGANWQANNYLNNQAISFSVTSTAGKTLVFEDVAPSNWQFGQTFTSGVQF 249          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.953e-16
Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTT-SDGRTVTSYNVAPASWSFGRTY-SGAQFR 252
            KG RT W  MS NWG ++Q+ + L GQSLSF+VT+ + G T+ ++NVAPA+WS G+TY S A FR
Sbjct:  198 KGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSYTTGETIYAWNVAPANWSGGKTYKSTANFR 262          

HSP 2 Score: 35.039 bits (79), Expect = 3.953e-16
Identity = 13/27 (48.15%), Postives = 23/27 (85.19%), Query Frame = 3
Query:    9 LVLITNVGGAGDVHAVSIKGSQ-NWLA 86
            L+ + NVGGAGD+ ++++KGS+ NW++
Sbjct:  180 LIFVMNVGGAGDIKSMAVKGSRTNWIS 206          
The following BLAST results are available for this feature:
BLAST of EY702201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
EXP29_ORYSJ1.305e-1757.14Expansin-A29 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP20_ARATH1.698e-1761.29Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=... [more]
EXP25_ORYSJ2.870e-1754.10Expansin-A25 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP32_ORYSJ6.296e-1748.28Expansin-A32 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP17_ARATH6.307e-1762.75Putative expansin-A17 OS=Arabidopsis thaliana GN=E... [more]
EXP12_ARATH6.309e-1758.62Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=... [more]
EXP21_ARATH1.385e-1656.67Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=... [more]
EXP18_ORYSJ1.802e-1655.74Expansin-A18 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP12_ORYSJ2.444e-1656.92Expansin-A12 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA7_ARATH3.953e-1655.38Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-B12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702201 ID=EY702201; Name=EY702201; organism=Citrus sinensis; type=EST; length=857bp
ACTTCAACCTTGTCCTGATCACCAACGTTGGTGGTGCTGGTGATGTTCAT
GCTGTTTCAATCAAAGGGTCTCAGAACTGGCTGGCAGCCCATGTCAAGAA
ACTGGGGCCAAAACTGGCAAAGCAACACTTATCTCAATGGCCAAAGCCTG
TCATTTAAGGTCACCACAAGCGATGGCCGCACTGTGACTTCCTACAATGT
TGCCCCTGCTAGCTGGTCCTTTGGCCGAACTTACTCCGGTGCTCAATTCC
GCTAGAGCCACCAAGACCATTAGAGATTGGGTTTTAACACCTTTTTTAGC
TAAATATTCGTGTACTAAGTAGCATATTTTAGTATGAAATTTTAGCATAC
TAGGGTATATATATATATATATAATATAGAAGTAGCTAATGTGGCTAGTT
TTTGGCTTCCAGCGTCAAAAATGAAAAAAGGGGCTTATTTTAAAATGGCT
TATTTNTTTTCATTTTGAATCTATCTTTATGGTTTCAGTGGGGTGCCGAC
ATATGGGAACCTCATATCCCGTTGGAGATCCCTTTTTTAACTTTTGTTTT
TGCGGGGTTCTGCCTCCACTCTACCCACTGTCTAAGTGGAAAAATTTCCA
CCCACCAATATGCGTTGAACATCCCGCTCTCCACACTCTCTGATCTTCTT
TAGCATTGCTTGCCACAAAGCCATTTTCCCAATCGCCGTATAACTCTTGA
CTACAAATTCAATCTAAGACCTATATCCCCCCCACTTCCAGCCTCACATC
AAATCACTCCTCGCGCCGTACCACCTAGCCCTCTTCACCATACTTCCTAA
GATGCAGCTTTCAACGGCTAACAACTCCTCAACTGCGGGTCCTCTTACGA
CACCGAA
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