EY702201

Overview
NameEY702201
Unique NameEY702201
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.654e-14
Identity = 34/63 (53.97%), Postives = 42/63 (66.67%), Query Frame = 1
Query:   52 LFQSKGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSG 240
            L Q KG +TGW  M +NWGQNW +   L GQ +SF+VTTSDG T    NV P +W FG+T+ G
Sbjct:  210 LMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDG 272          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.654e-14
Identity = 34/63 (53.97%), Postives = 42/63 (66.67%), Query Frame = 1
Query:   52 LFQSKGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSG 240
            L Q KG +TGW  M +NWGQNW +   L GQ +SF+VTTSDG T    NV P +W FG+T+ G
Sbjct:  203 LMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDG 265          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 9.650e-14
Identity = 25/54 (46.30%), Postives = 35/54 (64.81%), Query Frame = 1
Query:   73 RTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTY 234
            R  W P+ R+WGQ W++   L G+SL+F+V T D R  TS+ VAP  W++  TY
Sbjct:  231 RVKWTPLQRSWGQLWKTEANLTGESLTFRVMTGDHRKATSWRVAPRDWTYDNTY 284          

HSP 2 Score: 33.4982 bits (75), Expect = 9.650e-14
Identity = 12/24 (50.00%), Postives = 21/24 (87.50%), Query Frame = 3
Query:    3 FNLVLITNVGGAGDVHAVSIKGSQ 74
            +N+V++ NVGGAGDV  +++KG++
Sbjct:  207 YNMVMVKNVGGAGDVVKLTVKGTK 230          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 9.609e-13
Identity = 35/61 (57.38%), Postives = 42/61 (68.85%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQ 246
            KG  TGW  MSRNWG NWQS   L GQ+LSF VTT+ G+ +   +VAPA W FG+T+S  Q
Sbjct:  192 KGTNTGWIQMSRNWGANWQSLAGLAGQALSFAVTTTGGQYLQFQDVAPAWWQFGQTFSTYQ 252          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.141e-12
Identity = 33/58 (56.90%), Postives = 40/58 (68.97%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYS 237
            +G  TGW  MSRNWG NWQS   L GQ LSF VTT+ G+ +   +VAPA W FG+T+S
Sbjct:  191 RGAGTGWLQMSRNWGANWQSLAGLAGQPLSFGVTTTGGQYILFQDVAPAGWKFGQTFS 248          
BLAST of EY702201 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11
Identity = 29/58 (50.00%), Postives = 41/58 (70.69%), Query Frame = 1
Query:   64 KGLRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYS 237
            KG  T   P+SRNWG NWQS+  L GQ+L+F VT++ G+T+   N+ PA W FG+++S
Sbjct:  196 KGPNTDRMPLSRNWGANWQSHAGLVGQTLTFGVTSTGGQTLVFQNIVPAWWKFGQSFS 253          
The following BLAST results are available for this feature:
BLAST of EY702201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
EXP25_ARATH6.654e-1453.97Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=... [more]
EXP23_ARATH6.654e-1453.97Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=... [more]
EXP26_ORYSJ9.650e-1446.30Expansin-A26 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP31_ORYSJ9.609e-1357.38Expansin-A31 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP27_ORYSJ2.141e-1256.90Putative expansin-A27 OS=Oryza sativa subsp. japon... [more]
EXP15_ORYSJ8.994e-1150.00Expansin-A15 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-B12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702201 ID=EY702201; Name=EY702201; organism=Citrus sinensis; type=EST; length=857bp
ACTTCAACCTTGTCCTGATCACCAACGTTGGTGGTGCTGGTGATGTTCAT
GCTGTTTCAATCAAAGGGTCTCAGAACTGGCTGGCAGCCCATGTCAAGAA
ACTGGGGCCAAAACTGGCAAAGCAACACTTATCTCAATGGCCAAAGCCTG
TCATTTAAGGTCACCACAAGCGATGGCCGCACTGTGACTTCCTACAATGT
TGCCCCTGCTAGCTGGTCCTTTGGCCGAACTTACTCCGGTGCTCAATTCC
GCTAGAGCCACCAAGACCATTAGAGATTGGGTTTTAACACCTTTTTTAGC
TAAATATTCGTGTACTAAGTAGCATATTTTAGTATGAAATTTTAGCATAC
TAGGGTATATATATATATATATAATATAGAAGTAGCTAATGTGGCTAGTT
TTTGGCTTCCAGCGTCAAAAATGAAAAAAGGGGCTTATTTTAAAATGGCT
TATTTNTTTTCATTTTGAATCTATCTTTATGGTTTCAGTGGGGTGCCGAC
ATATGGGAACCTCATATCCCGTTGGAGATCCCTTTTTTAACTTTTGTTTT
TGCGGGGTTCTGCCTCCACTCTACCCACTGTCTAAGTGGAAAAATTTCCA
CCCACCAATATGCGTTGAACATCCCGCTCTCCACACTCTCTGATCTTCTT
TAGCATTGCTTGCCACAAAGCCATTTTCCCAATCGCCGTATAACTCTTGA
CTACAAATTCAATCTAAGACCTATATCCCCCCCACTTCCAGCCTCACATC
AAATCACTCCTCGCGCCGTACCACCTAGCCCTCTTCACCATACTTCCTAA
GATGCAGCTTTCAACGGCTAACAACTCCTCAACTGCGGGTCCTCTTACGA
CACCGAA
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