CX077154
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX077154 vs. ExPASy Swiss-Prot
Match: RS4_METKA (30S ribosomal protein S4P OS=Methanopyrus kandleri GN=rps4p PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14 Identity = 40/100 (40.00%), Postives = 67/100 (67.00%), Query Frame = -3 Query: 390 NPRRIFEGEALLRRMHRYGFLEESQNK--LDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSP 683 +P E EAL R+++ G L++ + LD +L LTVE+ LERRLQT+V++ G+AK+ AR L+ RHI +G ++V +PS++V + ++ +++S SP Sbjct: 63 DPEAQREREALFRKLYDLGILDKKPEEATLDDILRLTVEDVLERRLQTIVYRKGLAKTPLQARQLVVHRHIAIGDRIVTVPSYLVSREEEEEVDYSPYSP 162
BLAST of CX077154 vs. ExPASy Swiss-Prot
Match: RS4_THESM (30S ribosomal protein S4P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rps4p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.755e-14 Identity = 43/97 (44.33%), Postives = 61/97 (62.89%), Query Frame = -3 Query: 375 EGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGR 665 E LL+R+ R G L E + LD VL+LT+++ LERRLQTLVFK G+A++I AR LI HI V Q++ PS++V + + I + SPF + Sbjct: 69 ERAQLLQRLARLGILPEGAH-LDDVLSLTIDDILERRLQTLVFKKGLARTIKQARQLIVHGHIEVNGQIIRSPSYLVLKEEEDGITYGRASPFANSQ 164
BLAST of CX077154 vs. ExPASy Swiss-Prot
Match: RS4_HYPBU (30S ribosomal protein S4P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps4p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.755e-14 Identity = 41/97 (42.27%), Postives = 64/97 (65.98%), Query Frame = -3 Query: 375 EGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGR 665 E +ALL R++ G L E+ LD VL LT E+FLERRLQT+V+K G+A++I+ AR LI HI + + + P ++V+ D + ++++ TSP+ R Sbjct: 69 EEKALLARLNELGVLPENAT-LDDVLNLTAEHFLERRLQTIVYKKGLARTIYEARQLIVHGHIAIAGRKIRSPGYLVKKDEEDLVDYAPTSPYAKRR 164
BLAST of CX077154 vs. ExPASy Swiss-Prot
Match: RS4_METJA (30S ribosomal protein S4P OS=Methanocaldococcus jannaschii GN=rps4p PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.905e-14 Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = -3 Query: 360 EGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFG-GGRPGRVK 665 E L + +YG L+ LD VL+LTVE+ LERRLQTLVF+ G+A++ AR LI HI V ++V PS++V V+ + I ++ SPF P R K Sbjct: 70 EAVQLFNVLKKYGILKIENPTLDDVLSLTVEDILERRLQTLVFRKGLARTPRQARQLIVHGHIAVNGRVVTAPSYMVTVEEEDKISYAKNSPFNDDNHPERAK 172
BLAST of CX077154 vs. ExPASy Swiss-Prot
Match: RS4_THEON (30S ribosomal protein S4P OS=Thermococcus onnurineus (strain NA1) GN=rps4p PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14 Identity = 43/93 (46.24%), Postives = 61/93 (65.59%), Query Frame = -3 Query: 387 EGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPF 665 E LL+R++R G L + LD VL+LTVE+ L+RRLQT+VFK G+A++I AR LI HI V Q++ P ++V + + I +S TSPF Sbjct: 69 ERAQLLQRLNRLGLLP-ADAVLDDVLSLTVEDVLDRRLQTIVFKKGLARTIRQARQLIVHGHIEVNGQIIRSPGYLVLKEEEDTITYSKTSPF 160
BLAST of CX077154 vs. ExPASy Swiss-Prot
Match: RS4_PYRKO (30S ribosomal protein S4P OS=Pyrococcus kodakaraensis GN=rps4p PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.578e-12 Identity = 42/102 (41.18%), Postives = 65/102 (63.73%), Query Frame = -3 Query: 363 EGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFG-GGRPGRV 665 E + LL+R++R G L + LD VL+LTVE+ LERRLQT+V++ G+A+++ AR LI HI V Q++ P ++V + + I ++ SPF G P R+ Sbjct: 69 ERQQLLQRLYRLGLLP-ADAVLDDVLSLTVEDVLERRLQTIVYRKGLARTMKQARQLIVHGHIEVNGQVIRSPGYLVLREEEDTITYAKGSPFAKEGHPERM 169
BLAST of CX077154 vs. ExPASy Swiss-Prot
Match: RS4_THEPD (30S ribosomal protein S4P OS=Thermofilum pendens (strain Hrk 5) GN=rps4p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.061e-12 Identity = 43/107 (40.19%), Postives = 61/107 (57.01%), Query Frame = -3 Query: 390 RDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSP 710 R LL L + RI + L+ R+++ G L LD VL+LTV + LERRLQT+V++ G+A +I HAR LI HI V + V P ++V D + I + SP Sbjct: 56 RKLLALPAEE--RIKLEKPLVSRLYKMGLLPSEDASLDDVLSLTVRDVLERRLQTIVYRKGLATTIRHARQLITHGHIAVNSRRVRSPGYLVSRDEENFISYYEGSP 160
BLAST of CX077154 vs. ExPASy Swiss-Prot
Match: RS4_SULSO (30S ribosomal protein S4P OS=Sulfolobus solfataricus GN=rps4p PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.515e-12 Identity = 40/113 (35.40%), Postives = 65/113 (57.52%), Query Frame = -3 Query: 372 RDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRP 710 R LL L R + L+ ++ + G L++ +D +L+LT ++ LERRLQT+V+K G++ +I+ AR LI HI V + V P ++V VD + I++ +TS F P Sbjct: 56 RSLLALPPAE--RAVREKQLVGKLLKMGLLKKETATVDDILSLTEQDLLERRLQTIVYKKGLSNTIYQARQLITHGHIAVNGKRVTSPGYIVNVDEENLIDYYVTSSFKSRPP 166
BLAST of CX077154 vs. ExPASy Swiss-Prot
Match: RS4_PYRCJ (30S ribosomal protein S4P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps4p PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.515e-12 Identity = 37/89 (41.57%), Postives = 55/89 (61.80%), Query Frame = -3 Query: 435 LTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVV 701 +T +E+ P + ++++ GF+E+ LD +L+L V LERRLQTLVF+ G+AKSIHHAR L+ H+ V + V P F+V Sbjct: 63 MTAEERAPLEV----PFKEKLYKMGFIEDPNVPLDRILSLDVRAILERRLQTLVFRMGLAKSIHHARQLVVHGHVLVAGRRVTSPGFLV 147
BLAST of CX077154 vs. ExPASy Swiss-Prot
Match: RS4_METLZ (30S ribosomal protein S4P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps4p PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.515e-12 Identity = 40/108 (37.04%), Postives = 62/108 (57.41%), Query Frame = -3 Query: 357 PRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKR 680 P+ I + L+ + RYG L +D +L+L VE+ LERRLQT+V++ G+A+S AR LI HI + Q V++PS++V + + I + TS G G +R Sbjct: 69 PKTIARRDELVGTLQRYGLLGPDA-AMDNILSLKVEDILERRLQTIVYRKGLARSPKQARQLITHGHIAINGQRVSVPSYMVSIAEEAGIMYYATSSLGDEANGERQR 175 The following BLAST results are available for this feature:
BLAST of CX077154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >CX077154 ID=CX077154; Name=CX077154; organism=Citrus sinensis; type=EST; length=712bpback to top |