CX077151

Overview
NameCX077151
Unique NameCX077151
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX077151 vs. ExPASy Swiss-Prot
Match: CANB2_DICDI (Calcineurin subunit B type 2 OS=Dictyostelium discoideum GN=cnbB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.240e-15
Identity = 46/142 (32.39%), Postives = 80/142 (56.34%), Query Frame = -2
Query:  307 EDPEILARETVFSVSEIEALYELFKKISSAVIDDGLINKEEF-QLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIETIIDKT 729
            E+ E +   ++FS  EI+ LY+ FK++     + G IN E+F Q+     N        R+  +FD   +G + F++F ++LS FHP A   DKI+  F++YD+   GFI R E++ ++   +   G NL+ + I +I+++T
Sbjct:   11 EEIEEIREVSIFSQREIKRLYKRFKRLDKE--EKGSINVEDFNQIPELSMNP----MLPRIISIFDVNRDGQVNFKQFVKSLSTFHPKADKADKIKILFKVYDINNDGFITRDEIETILTMMV---GSNLTKEQISSIVEET 143          
BLAST of CX077151 vs. ExPASy Swiss-Prot
Match: CANB1_NAEGR (Calcineurin subunit B OS=Naegleria gruberi GN=CNB1 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.188e-13
Identity = 51/145 (35.17%), Postives = 77/145 (53.10%), Query Frame = -2
Query:  307 EDPEILARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQE----VKQMVVATLAESGMNLSDDVIETIIDKT 729
            E+ E + + T F+  EI+ LY+ FKK+      +G I+K+EF   L       +    RV  +FD   +G + F+EF  ALSVF+       K+EF+F++YD+   G+I   E    +K MV       G NLSD  ++ I+DKT
Sbjct:   11 EEVEEMQKGTNFTQKEIKKLYKRFKKLDKD--GNGTISKDEF---LMIPELAVNPLVKRVISIFDENGDGSVNFKEFIAALSVFNAQGDKQRKLEFAFKVYDIDGDGYISNGELFTVLKMMV-------GNNLSDVQLQQIVDKT 143          
BLAST of CX077151 vs. ExPASy Swiss-Prot
Match: NCSA_DICDI (Calcium-binding protein NCSA OS=Dictyostelium discoideum GN=ncsA PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.737e-12
Identity = 39/118 (33.05%), Postives = 66/118 (55.93%), Query Frame = -2
Query:  376 EDPEILARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMV 729
            E+ E+L   + F   E+ ALY+ F+K S +    G INK+EF+  + +    +    D +F++FD   +  + F+EF   LS      P ++KIEF+F LYD+   G+I R E++ ++
Sbjct:   11 EEVELLQNSSHFDSRELRALYKQFRKDSPS----GTINKQEFKEIMTQMGVGDQFLQDLLFNVFDKNKDSTINFQEFVCGLSSITRGTP-EEKIEFAFSLYDIDGNGYITRSEMESIL 123          
BLAST of CX077151 vs. ExPASy Swiss-Prot
Match: CANB_ASHGO (Calcineurin subunit B OS=Ashbya gossypii GN=CNB1 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.785e-12
Identity = 45/146 (30.82%), Postives = 76/146 (52.05%), Query Frame = -2
Query:  307 PSRGLEDPEILARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIETIIDKT 744
            PS+ LED   L  +T F   EIE L + F K+       G I+K EF           +  A R+ ++FD  ++G + F+EF   LSVF   +  ++K+ F+F++YD+ + G+I   E   + +      G NL D+ ++ ++D+T
Sbjct:    5 PSKILED---LLDDTNFDREEIERLRKRFMKLDRD--SSGSIDKNEFMSI---PGVSSNPLAGRIMEVFDADNSGDVDFQEFISGLSVFSGRSDKEEKLRFAFKIYDIDKDGYISNGE---LFIVLKIMVGNNLEDEQLQQVVDRT 139          
BLAST of CX077151 vs. ExPASy Swiss-Prot
Match: CANB_YEAST (Calcineurin subunit B OS=Saccharomyces cerevisiae GN=CNB1 PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 1.278e-11
Identity = 42/136 (30.88%), Postives = 69/136 (50.74%), Query Frame = -2
Query:  307 LARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIETIIDKT 714
            L  +T F   EIE L + F K+       G I+K EF           +  A R+ ++FD  ++G + F+EF   LS+F      D+K+ F+F++YD+ + GFI   E   + +      G NL D+ ++ I+D+T
Sbjct:   12 LLEDTNFDRDEIERLRKRFMKLDRD--SSGSIDKNEFMSI---PGVSSNPLAGRIMEVFDADNSGDVDFQEFITGLSIFSGRGSKDEKLRFAFKIYDIDKDGFISNGE---LFIVLKIMVGSNLDDEQLQQIVDRT 139          
BLAST of CX077151 vs. ExPASy Swiss-Prot
Match: CANB_DEBHA (Calcineurin subunit B OS=Debaryomyces hansenii GN=CNB1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.847e-11
Identity = 49/141 (34.75%), Postives = 71/141 (50.35%), Query Frame = -2
Query:  307 EILARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQE---VKQMVVATLAESGMNLSDDVIETIIDKT 720
            E L   T F   EIE L + F K+       G I+K EF   L       +  A R+ D+FD   NG + F+EF   LS F       DK++F+F++YD+ + G+I   E   V +M+V      G NL D+ ++ I+DKT
Sbjct:   10 ENLMEGTNFDKEEIERLRKRFMKLDKD--GSGTIDKNEF---LTIPGISSNPLAARLMDVFDEDGNGTIDFQEFIMGLSAFSGKTSKLDKLKFAFKIYDIDRDGYIGNGELFIVMKMMV------GKNLQDEELQQIVDKT 139          
BLAST of CX077151 vs. ExPASy Swiss-Prot
Match: CANB1_RAT (Calcineurin subunit B type 1 OS=Rattus norvegicus GN=Ppp3r1 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.847e-11
Identity = 41/130 (31.54%), Postives = 71/130 (54.62%), Query Frame = -2
Query:  307 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIETIIDKT 696
            F   EI+ L + FKK+   + + G ++ EEF   +     +++    RV D+FDT  NG + F+EF   +S F      + K+ F+F++YD+ + G+I   E+ Q++   +   G NL D  ++ I+DKT
Sbjct:   15 FDADEIKRLGKRFKKLD--LDNSGSLSVEEF---MSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV---GNNLKDTQLQQIVDKT 136          
BLAST of CX077151 vs. ExPASy Swiss-Prot
Match: CANB1_MOUSE (Calcineurin subunit B type 1 OS=Mus musculus GN=Ppp3r1 PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 2.847e-11
Identity = 41/130 (31.54%), Postives = 71/130 (54.62%), Query Frame = -2
Query:  307 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIETIIDKT 696
            F   EI+ L + FKK+   + + G ++ EEF   +     +++    RV D+FDT  NG + F+EF   +S F      + K+ F+F++YD+ + G+I   E+ Q++   +   G NL D  ++ I+DKT
Sbjct:   15 FDADEIKRLGKRFKKLD--LDNSGSLSVEEF---MSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV---GNNLKDTQLQQIVDKT 136          
BLAST of CX077151 vs. ExPASy Swiss-Prot
Match: CANB1_HUMAN (Calcineurin subunit B type 1 OS=Homo sapiens GN=PPP3R1 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.847e-11
Identity = 41/130 (31.54%), Postives = 71/130 (54.62%), Query Frame = -2
Query:  307 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIETIIDKT 696
            F   EI+ L + FKK+   + + G ++ EEF   +     +++    RV D+FDT  NG + F+EF   +S F      + K+ F+F++YD+ + G+I   E+ Q++   +   G NL D  ++ I+DKT
Sbjct:   15 FDADEIKRLGKRFKKLD--LDNSGSLSVEEF---MSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV---GNNLKDTQLQQIVDKT 136          
BLAST of CX077151 vs. ExPASy Swiss-Prot
Match: CANB1_BOVIN (Calcineurin subunit B type 1 OS=Bos taurus GN=PPP3R1 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.847e-11
Identity = 41/130 (31.54%), Postives = 71/130 (54.62%), Query Frame = -2
Query:  307 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIETIIDKT 696
            F   EI+ L + FKK+   + + G ++ EEF   +     +++    RV D+FDT  NG + F+EF   +S F      + K+ F+F++YD+ + G+I   E+ Q++   +   G NL D  ++ I+DKT
Sbjct:   15 FDADEIKRLGKRFKKLD--LDNSGSLSVEEF---MSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV---GNNLKDTQLQQIVDKT 136          
The following BLAST results are available for this feature:
BLAST of CX077151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
CANB2_DICDI7.240e-1532.39Calcineurin subunit B type 2 OS=Dictyostelium disc... [more]
CANB1_NAEGR5.188e-1335.17Calcineurin subunit B OS=Naegleria gruberi GN=CNB1... [more]
NCSA_DICDI5.737e-1233.05Calcium-binding protein NCSA OS=Dictyostelium disc... [more]
CANB_ASHGO9.785e-1230.82Calcineurin subunit B OS=Ashbya gossypii GN=CNB1 P... [more]
CANB_YEAST1.278e-1130.88Calcineurin subunit B OS=Saccharomyces cerevisiae ... [more]
CANB_DEBHA2.847e-1134.75Calcineurin subunit B OS=Debaryomyces hansenii GN=... [more]
CANB1_RAT2.847e-1131.54Calcineurin subunit B type 1 OS=Rattus norvegicus ... [more]
CANB1_MOUSE2.847e-1131.54Calcineurin subunit B type 1 OS=Mus musculus GN=Pp... [more]
CANB1_HUMAN2.847e-1131.54Calcineurin subunit B type 1 OS=Homo sapiens GN=PP... [more]
CANB1_BOVIN2.847e-1131.54Calcineurin subunit B type 1 OS=Bos taurus GN=PPP3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_54G08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-54G08-M16-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077151 ID=CX077151; Name=CX077151; organism=Citrus sinensis; type=EST; length=811bp
TTTTTTTTTTTTTTTTTAATGATAAGCGGGTAGAACTCTAGTATTTAATA
CTAAATACACAAAAACAAACATCCCCAAAAAAGAAACCAATACCAATACG
ATGCAGAAGCAACACTCTCCCATGCCCTTCACAATCACGCACGAGAGAGC
CATGTTGTCTATAAATAAACAAAACATAAAAATAACAATCTCTCTTGAGC
TCTAACCGTTCCCTAGTTTAGGTATCTTCAACTCTTGAATGGAACACAAA
GCTCGGGAACGTTGTTGTGATGTCCTTGAGGTACTGGAGGGTCATATTCT
TCAAAAGGTCTTATCAATTATAGTTTCTATAACGTCATCCGAAAGATTCA
TGCCAGATTCTGCAAGTGTAGCTACCACCATTTGCTTCACCTCCTGCCTC
TCAATAAAACCTTGCTGCTTGAGATCATATAGTTGAAAAGAGAACTCAAT
TTTATCATCAATTGGGGCATTTGGATGGAAAACAGAAAGAGCACGAGCAA
ACTCTTCAAACCCTAGTATTCCATTGTGCTTTGTATCAAATAAGTCAAAA
ACCCGATCAGCAAACAAGCTCTCTTTTTTGTTTGTCTTGAATAATGCTAA
CTGGAACTCTTCCTTGTTAATTAGACCGTCATCAATCACAGCACTGCTAA
TCTTCTTAAAGAGCTCATACAGTGCCTCGATTTCACTTACACTAAAAACT
GTCTCTCTCGCAAGTATTTCAGGATCTTCGAGGCCCCTAGACGGATTTGT
ATCACAGCACTGCAATAGGGAAGCAAATAAATGCTTAAATCCCTCTATGC
ACTGCAACATG
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