CX077151

Overview
NameCX077151
Unique NameCX077151
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX077151 vs. ExPASy Swiss-Prot
Match: CANB_KLULA (Calcineurin subunit B OS=Kluyveromyces lactis GN=CNB1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.856e-11
Identity = 44/146 (30.14%), Postives = 76/146 (52.05%), Query Frame = -2
Query:  307 PSRGLEDPEILARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIETIIDKT 744
            PSR +++   L  +T F  +EIE L + F K+       G I+K EF           +  A R+ ++FD  ++G + F+EF  +LS+F      D K+ F+F++YD+ + G+I   E   + +      G NL D+ ++ I+D+T
Sbjct:    5 PSRIVDN---LLDDTNFDRAEIERLKKRFMKLDKD--SSGSIDKTEFMSI---PGVSANPLAKRIIEVFDEDNSGDVDFQEFITSLSIFSGRGETDAKLRFAFRIYDIDKDGYISNGE---LFIVLKIMVGTNLEDEQLQQIVDRT 139          
BLAST of CX077151 vs. ExPASy Swiss-Prot
Match: CANB_CANGA (Calcineurin subunit B OS=Candida glabrata GN=CNB1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.856e-11
Identity = 42/138 (30.43%), Postives = 69/138 (50.00%), Query Frame = -2
Query:  307 EILARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIETIIDKT 720
            E L  +T F   EIE L + F K+       G I+K EF           +  A R+ ++FD  ++G + F+EF   LS+F      D+K++F+F++YD+ + G I   E   + +      G NL D  ++ I+D+T
Sbjct:   10 ETLLEDTNFDRDEIERLRKRFMKLDRD--SSGSIDKNEFMSI---PGVSANPLAGRIMEVFDADNSGDVDFQEFITGLSIFSGRGSKDEKLKFAFKIYDIDKDGLISNGE---LFIVLKIMVGSNLDDKQLQQIVDRT 139          
The following BLAST results are available for this feature:
BLAST of CX077151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
CANB_KLULA4.856e-1130.14Calcineurin subunit B OS=Kluyveromyces lactis GN=C... [more]
CANB_CANGA4.856e-1130.43Calcineurin subunit B OS=Candida glabrata GN=CNB1 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_54G08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-54G08-M16-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077151 ID=CX077151; Name=CX077151; organism=Citrus sinensis; type=EST; length=811bp
TTTTTTTTTTTTTTTTTAATGATAAGCGGGTAGAACTCTAGTATTTAATA
CTAAATACACAAAAACAAACATCCCCAAAAAAGAAACCAATACCAATACG
ATGCAGAAGCAACACTCTCCCATGCCCTTCACAATCACGCACGAGAGAGC
CATGTTGTCTATAAATAAACAAAACATAAAAATAACAATCTCTCTTGAGC
TCTAACCGTTCCCTAGTTTAGGTATCTTCAACTCTTGAATGGAACACAAA
GCTCGGGAACGTTGTTGTGATGTCCTTGAGGTACTGGAGGGTCATATTCT
TCAAAAGGTCTTATCAATTATAGTTTCTATAACGTCATCCGAAAGATTCA
TGCCAGATTCTGCAAGTGTAGCTACCACCATTTGCTTCACCTCCTGCCTC
TCAATAAAACCTTGCTGCTTGAGATCATATAGTTGAAAAGAGAACTCAAT
TTTATCATCAATTGGGGCATTTGGATGGAAAACAGAAAGAGCACGAGCAA
ACTCTTCAAACCCTAGTATTCCATTGTGCTTTGTATCAAATAAGTCAAAA
ACCCGATCAGCAAACAAGCTCTCTTTTTTGTTTGTCTTGAATAATGCTAA
CTGGAACTCTTCCTTGTTAATTAGACCGTCATCAATCACAGCACTGCTAA
TCTTCTTAAAGAGCTCATACAGTGCCTCGATTTCACTTACACTAAAAACT
GTCTCTCTCGCAAGTATTTCAGGATCTTCGAGGCCCCTAGACGGATTTGT
ATCACAGCACTGCAATAGGGAAGCAAATAAATGCTTAAATCCCTCTATGC
ACTGCAACATG
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