CX077145

Overview
NameCX077145
Unique NameCX077145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P2_STAAN (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain N315) GN=gapA2 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.628e-51
Identity = 110/230 (47.83%), Postives = 142/230 (61.74%), Query Frame = 3
Query:    9 GPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLV 698
            G  A  HI+AGAKKV++T P+KG  +   V GVN+   D E  +I SNASCTTNC+ P  KV++ + GIV G +TT H+ T DQ                  +I+PTSTGAAKA+  VLP+L+GKL+G+ALR               EK+ +TAE+VN AF  A    L+GI+ V   PLVSVDF  +  S+ ID+  TMVM  + VKV+AWYDNEWGYS RVVD+A  +
Sbjct:  103 GDKAIAHIKAGAKKVLLTGPSKGGHVQMVVKGVNDNQLDIEAFDIFSNASCTTNCIGPVAKVLNNQFGIVNGLMTTVHAITNDQKNIDNPHKDLRRARSCNESIIPTSTGAAKALKEVLPELEGKLHGMALRVPTKNVSLVDLVVDLEKE-VTAEEVNQAFENAG---LEGIIEVEHQPLVSVDFNTNPNSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDVAEQI 328          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P2_STAAM (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gapA2 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.628e-51
Identity = 110/230 (47.83%), Postives = 142/230 (61.74%), Query Frame = 3
Query:    9 GPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLV 698
            G  A  HI+AGAKKV++T P+KG  +   V GVN+   D E  +I SNASCTTNC+ P  KV++ + GIV G +TT H+ T DQ                  +I+PTSTGAAKA+  VLP+L+GKL+G+ALR               EK+ +TAE+VN AF  A    L+GI+ V   PLVSVDF  +  S+ ID+  TMVM  + VKV+AWYDNEWGYS RVVD+A  +
Sbjct:  103 GDKAIAHIKAGAKKVLLTGPSKGGHVQMVVKGVNDNQLDIEAFDIFSNASCTTNCIGPVAKVLNNQFGIVNGLMTTVHAITNDQKNIDNPHKDLRRARSCNESIIPTSTGAAKALKEVLPELEGKLHGMALRVPTKNVSLVDLVVDLEKE-VTAEEVNQAFENAG---LEGIIEVEHQPLVSVDFNTNPNSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDVAEQI 328          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P2_STAAC (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain COL) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.628e-51
Identity = 110/230 (47.83%), Postives = 142/230 (61.74%), Query Frame = 3
Query:    9 GPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLV 698
            G  A  HI+AGAKKV++T P+KG  +   V GVN+   D E  +I SNASCTTNC+ P  KV++ + GIV G +TT H+ T DQ                  +I+PTSTGAAKA+  VLP+L+GKL+G+ALR               EK+ +TAE+VN AF  A    L+GI+ V   PLVSVDF  +  S+ ID+  TMVM  + VKV+AWYDNEWGYS RVVD+A  +
Sbjct:  103 GDKAIAHIKAGAKKVLLTGPSKGGHVQMVVKGVNDNQLDIEAFDIFSNASCTTNCIGPVAKVLNNQFGIVNGLMTTVHAITNDQKNIDNPHKDLRRARSCNESIIPTSTGAAKALKEVLPELEGKLHGMALRVPTKNVSLVDLVVDLEKE-VTAEEVNQAFENAG---LEGIIEVEHQPLVSVDFNTNPNSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDVAEQI 328          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P_CORGL (Glyceraldehyde-3-phosphate dehydrogenase OS=Corynebacterium glutamicum GN=gap PE=1 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 4.738e-51
Identity = 114/234 (48.72%), Postives = 142/234 (60.68%), Query Frame = 3
Query:    6 DGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATK 707
            D   A  HI+AGAKKVII+APA   D  T+V GVN + YD E  N++S ASCTTNCLAP  KV++++ GI  G +TT H+YTGDQ                  NIVPTSTGAAKAV+LVLP+LKGKL+G ALR                K  +T E +NAA ++AA G     LA  + PLVS D       S  D+ LT V G + VKVV+WYDNEWGY+ +++ L  LVA+K
Sbjct:  103 DANAAKAHIEAGAKKVIISAPASNEDA-TFVYGVNHESYDPENHNVISGASCTTNCLAPMAKVLNDKFGIENGLMTTVHAYTGDQRLHDAPHRDLRRARAAAVNIVPTSTGAAKAVALVLPELKGKLDGYALR-VPVITGSATDLTFNTKSEVTVESINAAIKEAAVGEFGETLAYSEEPLVSTDIVHDSHGSIFDAGLTKVSG-NTVKVVSWYDNEWGYTCQLLRLTELVASK 333          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P2_STAAR (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain MRSA252) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.738e-51
Identity = 110/230 (47.83%), Postives = 142/230 (61.74%), Query Frame = 3
Query:    9 GPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLV 698
            G  A  HI+AGAKKV++T P+KG  +   V GVN+   D E  +I SNASCTTNC+ P  KV++ + GIV G +TT H+ T DQ                  +I+PTSTGAAKA+  VLP+L+GKL+G+ALR               EK+ +TAE+VN AF  A    L+GI+ V   PLVSVDF  +  S+ ID+  TMVM  + VKV+AWYDNEWGYS RVVD+A  +
Sbjct:  103 GDKAIAHIKAGAKKVLLTGPSKGGHVQMVVKGVNDDQLDIEAFDIFSNASCTTNCIGPVAKVLNNQFGIVNGLMTTVHAITNDQKNIDNPHKDLRRARSCNESIIPTSTGAAKALKEVLPELEGKLHGMALRVPTKNVSLVDLVVDLEKE-VTAEEVNQAFENAG---LEGIIEVEHQPLVSVDFNTNPHSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDVAEQI 328          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P_THEMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Thermotoga maritima GN=gap PE=1 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.379e-50
Identity = 111/224 (49.55%), Postives = 142/224 (63.39%), Query Frame = 3
Query:   27 HIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLV 698
            H+QAGAKKVIITAPAKG DI T V+G NE     E   I+S ASCTTN +AP VKV+ E+ GIV G +TT HSYT DQ                  NI+PT+TGAAKAV+LV+P++KGKL+G+A+R               EK+  T E+VNA  ++A EG LKGI+   D P+VS D   +  S   D+++T V+G  +VKV +WYDNE+GYS RVVD   L+
Sbjct:  110 HLQAGAKKVIITAPAKGEDI-TVVIGCNEDQLKPE-HTIISCASCTTNSIAPIVKVLHEKFGIVSGMLTTVHSYTNDQRVLDLPHKDLRRARAAAVNIIPTTTGAAKAVALVVPEVKGKLDGMAIRVPTPDGSITDLTVLVEKE-TTVEEVNAVMKEATEGRLKGIIGYNDEPIVSSDIIGTTFSGIFDATITNVIGGKLVKVASWYDNEYGYSNRVVDTLELL 330          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P2_STAES (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.352e-50
Identity = 106/227 (46.70%), Postives = 140/227 (61.67%), Query Frame = 3
Query:    9 GPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLA 689
            G  A  HI AGAKKV++T P+KG D+   V GVN+   D +  +I SNASCTTNC+ P  KV++++ GI+ G +TT H+ T DQ                  +I+PTSTGAAKA+  VLP+++GKL+G+ALR               E + +T   VN AF+ A    L G+L V + PLVSVDF  +  S+ IDS  TMVMG + VKV+AWYDNEWGYS RVV++A
Sbjct:  103 GDKAVAHINAGAKKVLLTGPSKGGDVQMIVKGVNDNQLDIDTYDIFSNASCTTNCIGPVAKVLNDKFGIINGLMTTVHAITNDQKNIDNPHKDLRRARSCNESIIPTSTGAAKALKEVLPEVEGKLHGMALRVPTKNVSLVDLVVDLE-QNVTVTQVNDAFKNA---DLSGVLDVEEAPLVSVDFNTNPHSAIIDSQSTMVMGQNKVKVIAWYDNEWGYSNRVVEVA 325          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P2_STAEQ (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.352e-50
Identity = 106/227 (46.70%), Postives = 140/227 (61.67%), Query Frame = 3
Query:    9 GPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLA 689
            G  A  HI AGAKKV++T P+KG D+   V GVN+   D +  +I SNASCTTNC+ P  KV++++ GI+ G +TT H+ T DQ                  +I+PTSTGAAKA+  VLP+++GKL+G+ALR               E + +T   VN AF+ A    L G+L V + PLVSVDF  +  S+ IDS  TMVMG + VKV+AWYDNEWGYS RVV++A
Sbjct:  103 GDKAVAHINAGAKKVLLTGPSKGGDVQMIVKGVNDNQLDIDTYDIFSNASCTTNCIGPVAKVLNDKFGIINGLMTTVHAITNDQKNIDNPHKDLRRARSCNESIIPTSTGAAKALKEVLPEVEGKLHGMALRVPTKNVSLVDLVVDLE-QNVTVTQVNDAFKNA---DLSGVLDVEEAPLVSVDFNTNPHSAIIDSQSTMVMGQNKVKVIAWYDNEWGYSNRVVEVA 325          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P_STRAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces arenae GN=gap PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.167e-49
Identity = 110/233 (47.21%), Postives = 137/233 (58.80%), Query Frame = 3
Query:    6 DGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVAT 704
            D   A  H+  GAKKVII APA G D  T V+GVN+ DYD E   I+SNASCTTNCL    KV+ + +GI  G +TT H+YT DQ                  NIVPTS+GAAKA+ LVLP+L G+L+  ALR                ++G + E+V  A+  AA GP KG+L+  D PLVS D    D +S  D+ LT V G   VKVV WYDNEWGYS R++DLA L+ +
Sbjct:  103 DAAKARSHVDGGAKKVIIAAPASGEDF-TVVLGVNDGDYDPERHTIISNASCTTNCLGVLAKVLHDAVGIDSGMMTTVHAYTQDQNLQDAPHKDLRRARAAALNIVPTSSGAAKAIGLVLPELAGRLDAFALR-VPVPTGSVTDLTVTTRRGTSVEEVKEAYAAAASGPYKGLLSYVDAPLVSTDI-VGDPASLFDAGLTRVCG-PQVKVVGWYDNEWGYSNRLIDLATLIGS 331          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P_BORBU (Glyceraldehyde-3-phosphate dehydrogenase OS=Borrelia burgdorferi GN=gap PE=1 SV=3)

HSP 1 Score: 196.052 bits (497), Expect = 1.991e-49
Identity = 107/219 (48.86%), Postives = 140/219 (63.93%), Query Frame = 3
Query:   36 AGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGP-LKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLA 689
            AGAKKVI+T PAK  +I T V+GVN+ D + ++   VSNASCTTNCLAP  KV+ E  GI +G +TT H+YT DQ                  +I+PTSTGAAKAV LVLP+LKGKLNG ++R               +KK +T E++N+  RKA+E P LKGIL   + P+VS D + +  SS +D   TMV+ +   K+++WYDNE+GYS RVVDLA
Sbjct:  114 AGAKKVILTVPAKD-EIKTIVLGVNDHDINSDL-KAVSNASCTTNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPHSDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSMRVPVPTGSIVDLTVQLKKKDVTKEEINSVLRKASETPELKGILGYTEDPIVSSDIKGNSHSSIVDGLETMVLENGFAKILSWYDNEFGYSTRVVDLA 330          
The following BLAST results are available for this feature:
BLAST of CX077145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 349
Match NameE-valueIdentityDescription
G3P2_STAAN3.628e-5147.83Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
G3P2_STAAM3.628e-5147.83Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
G3P2_STAAC3.628e-5147.83Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
G3P_CORGL4.738e-5148.72Glyceraldehyde-3-phosphate dehydrogenase OS=Coryne... [more]
G3P2_STAAR4.738e-5147.83Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
G3P_THEMA1.379e-5049.55Glyceraldehyde-3-phosphate dehydrogenase OS=Thermo... [more]
G3P2_STAES2.352e-5046.70Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
G3P2_STAEQ2.352e-5046.70Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
G3P_STRAE1.167e-4947.21Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3P_BORBU1.991e-4948.86Glyceraldehyde-3-phosphate dehydrogenase OS=Borrel... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_54G05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-54G05-M10-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077145 ID=CX077145; Name=CX077145; organism=Citrus sinensis; type=EST; length=807bp
TTGTGGACGGCCCTGGTGCTGGAAAGCACATCCAAGCTGGTGCCAAGAAA
GTTATTATCACTGCTCCAGCAAAAGGTGCAGACATTCCAACCTATGTCGT
TGGAGTTAACGAGAAGGATTACGATCACGAGGTTGCAAACATTGTGAGCA
ATGCTTCTTGCACCACAAACTGTTTGGCTCCTTTTGTGAAGGTCATGGAT
GAAGAATTGGGGATTGTCAAGGGAGCGATTACAACTACTCACTCCTACAC
TGGAGACCAGAGGCTCTTGGATGCTTCACACAGGGACTTGAGGAGAGCGA
GAGCTGCAGCGTTGAACATTGTCCCAACGAGCACAGGTGCCGCCAAGGCT
GTTTCTCTTGTGCTGCCACAGCTCAAAGGCAAGCTCAACGGCATTGCGCT
CCGTGTGCCAACACCAAATGTTTCAGTCGTTGACCTTGTTGTGAACGTTG
AGAAAAAGGGTATTACAGCAGAAGATGTTAATGCAGCCTTCAGAAAGGCT
GCTGAGGGGCCACTGAAGGGCATATTGGCCGTCTGCGATGTTCCACTGGT
GTCGGTGGACTTCCGATGCTCTGATGTTTCCTCCACCATTGACTCTTCAT
TGACCATGGTCATGGGTGATGATATGGTCAAGGTTGTTGCCTGGTACGAC
AATGAATGGGGATACAGCCAAAGGGTTGTCGATTTGGCGCATTTGGTTGC
AACCAAGTGGCCAGGCGTGGCTGCAGGCGGAAGCGGAGACCCATTGGAGG
ATTTCTGCCAGACAAACCCTGCTGATGAGGAGTGCAAAGTTTATGAAGCT
TAAATTC
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