CX077145

Overview
NameCX077145
Unique NameCX077145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P_LACDE (Glyceraldehyde-3-phosphate dehydrogenase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=gap PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.696e-29
Identity = 90/223 (40.36%), Postives = 119/223 (53.36%), Query Frame = 3
Query:   27 HIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQ--XXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVM--GD-DMVKVVAWYDNEWGYSQRVV 680
            H+ AGAK+V+I+APA G D+ T V  VN+     +   IVS  SCTTN LAP    +++E GI  G +TT H+YT  Q                    NI+P STGAAKA+ LVLP+L GKL+G A R               +KK +TAE+VNAA +K  E P     A     +VS D       S  D + T V+  GD  +VK VAWYDNE+ ++ ++V
Sbjct:  114 HLDAGAKRVLISAPA-GNDLKTIVYSVNQDTLTAD-DTIVSAGSCTTNSLAPMANALNKEFGIQVGTMTTIHAYTATQKVLDGPDRGNNFRNARAAAENIIPHSTGAAKAIGLVLPELNGKLDGHAQRVPVKDGSETELVTILDKK-VTAEEVNAAMKK-YESP---SFAYNADQIVSTDVLGMTAGSIFDPTQTQVITAGDKQLVKTVAWYDNEYSFTCQMV 329          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: E4PD_COLP3 (D-erythrose-4-phosphate dehydrogenase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=epd PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.696e-29
Identity = 73/222 (32.88%), Postives = 107/222 (48.20%), Query Frame = 3
Query:   27 HIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEG-PLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLA 689
            HI  GAKKV+ + P       T + G+N +        +VSN SCTTNC+ P +KV+DE  G+  G+ITT HS   DQ                  +I+P  T  A  +  +LP+ KG+   IA+R                   +   D+N A + A     L G+L+  + PLVSVDF     S  +D + T V    ++K++ W DNEWG++ R++D A
Sbjct:  112 HINRGAKKVLFSHPGSQDIDATIIYGINHQTLTSS-DRVVSNGSCTTNCIVPVIKVIDEAFGVESGSITTIHSSMHDQQVIDAYHKDLRLSRAASQSIIPVDTKLAAGIERILPKFKGRFEAIAVRVPTINVTAMDLSLTV-NNDVCICDINQAIQAATSNHDLYGVLSYTEEPLVSVDFNHDPHSCIVDGNQTRVSHKRLIKMLVWCDNEWGFANRMLDTA 331          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: E4PD_VIBFM (D-erythrose-4-phosphate dehydrogenase OS=Vibrio fischeri (strain MJ11) GN=epd PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.483e-28
Identity = 75/223 (33.63%), Postives = 106/223 (47.53%), Query Frame = 3
Query:   24 KHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLA 689
            KHI AGAKKV+ + P  G+D+  T + GVN      E   IVSN SCTTNC+ P +K +D+  GI  G ITT HS   DQ                  +I+P  T   K +  + P+   K   I++R                   +   D+N     A+   L  I+   + PLVS+DF     S+ +D S T V    +VK++ W DNEWG++ R++D A
Sbjct:  115 KHINAGAKKVLFSHPG-GSDLDNTIIYGVNHDTLLPE-HRIVSNGSCTTNCIIPVIKAIDDAFGIDSGTITTIHSSMNDQQVIDAYHSDLRRTRAASQSIIPVDTKLHKGIERIFPKFSNKFEAISVRVPTVNVTAMDLSVTINTN-VKVNDINQTIVNASRCTLHNIVDYTEAPLVSIDFNHDPHSAIVDGSQTRVSNGHLVKMLVWCDNEWGFANRMLDTA 334          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: E4PD_TOLAT (D-erythrose-4-phosphate dehydrogenase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=epd PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.483e-28
Identity = 66/225 (29.33%), Postives = 111/225 (49.33%), Query Frame = 3
Query:   27 HIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA 701
            H+ +GAKKV+ + P       T + GVN +    E   IVS+ SCTTNC+ P +K++D+   I  G +TT H+   DQ                  +I+P  T  A  ++ + P+   +   I++R                   ++  DVN   ++AA+G  + I+   ++PLVS+DF     S+ +D + T V G  ++K + W DNEWG++ R++D   ++A
Sbjct:  112 HLASGAKKVLFSHPGSSDLDATVIYGVNHQQLQSE-HRIVSSGSCTTNCIIPIIKLLDDAFSIESGTVTTIHASMNDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRIFPKFCDRFEAISVRVPTINVTAIDLSVTVTN-AVSVLDVNTMLQRAAKGDFRSIVDYTELPLVSIDFNHDPHSAIVDGTQTRVSGKHLIKTLVWCDNEWGFANRMLDTTLMMA 334          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: E4PD_VIBF1 (D-erythrose-4-phosphate dehydrogenase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=epd PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.937e-28
Identity = 75/223 (33.63%), Postives = 106/223 (47.53%), Query Frame = 3
Query:   24 KHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLA 689
            KHI AGAKKV+ + P  G+D+  T + GVN      E   IVSN SCTTNC+ P +K +D+  GI  G ITT HS   DQ                  +I+P  T   K +  + P+   K   I++R                   +   D+N     A+   L  I+   + PLVS+DF     S+ +D S T V    +VK++ W DNEWG++ R++D A
Sbjct:  115 KHITAGAKKVLFSHPG-GSDLDNTIIYGVNHDTLLPE-HRIVSNGSCTTNCIIPVIKAIDDAFGIDSGTITTIHSSMNDQQVIDAYHSDLRRTRAASQSIIPVDTKLHKGIERIFPKFSNKFEAISVRVPTVNVTAMDLSVTINTN-VKVNDINQTIVNASRCTLHNIVDYTEAPLVSIDFNHDPHSAIVDGSQTRVSNGHLVKMLVWCDNEWGFANRMLDTA 334          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: E4PD_ALISL (D-erythrose-4-phosphate dehydrogenase OS=Aliivibrio salmonicida (strain LFI1238) GN=epd PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.530e-28
Identity = 71/222 (31.98%), Postives = 103/222 (46.40%), Query Frame = 3
Query:   24 KHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLA 689
            +HI AGAKKV+ + P       T + GVN      E   +VSN SCTTNC+ P +K +D+  GI  G ITT HS   DQ                  +I+P  T   K +  + P+   K   I++R                   +   D+N     A++  L  I+   + PLVS+DF     S+ +D S T V    +VK++ W DNEWG++ R++D A
Sbjct:  115 RHIDAGAKKVLFSHPGSADLDNTIIYGVNHDTLLPE-HRVVSNGSCTTNCIIPVIKAIDDAFGIESGTITTIHSAMNDQPVIDAYHTDLRRTRAASQSIIPVDTKLHKGIERIFPKFSNKFEAISVRVPTVNVTAMDLSVTINTN-VKVNDINQTIVNASQCTLHNIVDYTEAPLVSIDFNHDPHSAIVDGSQTRVSNGHLVKMLVWCDNEWGFANRMLDTA 334          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: E4PD_PHOLL (D-erythrose-4-phosphate dehydrogenase OS=Photorhabdus luminescens subsp. laumondii GN=epd PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.304e-28
Identity = 68/219 (31.05%), Postives = 107/219 (48.86%), Query Frame = 3
Query:   27 HIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVD 683
            H+ +GAKKV+   P       T V GVN+     E   IVSNASCTTNC+ P +K++D++  I  G +TT H+   DQ                  +I+P  T  A  ++ + P+   +   I++R                K  +T   +N   +K+A    +GI+   ++PLVS DF     S+ +D + T V G  ++K + W DNEWG++ R++D
Sbjct:  112 HLASGAKKVLFAHPGGNDLDATVVYGVNQHLLTAE-DRIVSNASCTTNCIIPIIKLLDDQFEIESGTVTTIHASMNDQPVIDAYHKDLRRTRAASQSIIPVDTKLAAGITRIFPKFCDRFEAISVRVPTINVTAIDLSVTV-KSSVTVNKINELMQKSAATSFRGIVDYTELPLVSTDFNHDPHSAIVDGTQTRVSGQHLIKTLVWCDNEWGFANRMLD 328          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P_LACLA (Glyceraldehyde-3-phosphate dehydrogenase OS=Lactococcus lactis subsp. lactis GN=gap PE=3 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.005e-25
Identity = 81/228 (35.53%), Postives = 111/228 (48.68%), Query Frame = 3
Query:   18 AGKHIQ-AGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQ--XXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVM----GDDMVKVVAWYDNEWGYSQRVV 680
            A KH+   GAKKV+ITAP  G D+ T V   N    D     ++S  SCTTN LAP    +++  G+  G +TT HSYTGDQ                    NIVP S+GAAKA+ LVLP+L G + G A R               EK  +T +++N A + AA+      +      +VS D       S  D++LT V     G  +VK  AWYDNE  ++ +++
Sbjct:  106 AEKHLHPGGAKKVLITAPG-GNDVKTVVFNTNHTILDG-TETVISAGSCTTNSLAPMADALNKNFGVKGGTMTTVHSYTGDQMTLDGPHRGGDFRRARAAAENIVPASSGAAKAIGLVLPELSGLMKGHAQRVSTPTGSITELVTVLEKH-VTVDEINEAMKAAADESFGYNVD----EIVSSDIIGMAYGSLFDATLTEVTDLKDGGQLVKTAAWYDNEMSFTAQLI 326          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P_CAVPO (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Cavia porcellus GN=GAPDH PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.670e-11
Identity = 44/119 (36.97%), Postives = 58/119 (48.74%), Query Frame = 3
Query:  210 GIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDF 563
            GIV+G +TT H+ T  Q                   NI+P STGAAKAV  V+P+L GKL G+A R               EK     +D+    ++A+EG LKGIL   +  +VS DF
Sbjct:    1 GIVEGLMTTVHAITATQKTVDGPSGKLWRDGRAAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPA-KYDDIKKVVKQASEGSLKGILGYTEDQVVSCDF 118          
The following BLAST results are available for this feature:
BLAST of CX077145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 349
Match NameE-valueIdentityDescription
G3P_LACDE8.696e-2940.36Glyceraldehyde-3-phosphate dehydrogenase OS=Lactob... [more]
E4PD_COLP38.696e-2932.88D-erythrose-4-phosphate dehydrogenase OS=Colwellia... [more]
E4PD_VIBFM1.483e-2833.63D-erythrose-4-phosphate dehydrogenase OS=Vibrio fi... [more]
E4PD_TOLAT1.483e-2829.33D-erythrose-4-phosphate dehydrogenase OS=Tolumonas... [more]
E4PD_VIBF11.937e-2833.63D-erythrose-4-phosphate dehydrogenase OS=Vibrio fi... [more]
E4PD_ALISL2.530e-2831.98D-erythrose-4-phosphate dehydrogenase OS=Aliivibri... [more]
E4PD_PHOLL3.304e-2831.05D-erythrose-4-phosphate dehydrogenase OS=Photorhab... [more]
G3P_LACLA2.005e-2535.53Glyceraldehyde-3-phosphate dehydrogenase OS=Lactoc... [more]
G3P_CAVPO3.670e-1136.97Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_54G05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-54G05-M10-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077145 ID=CX077145; Name=CX077145; organism=Citrus sinensis; type=EST; length=807bp
TTGTGGACGGCCCTGGTGCTGGAAAGCACATCCAAGCTGGTGCCAAGAAA
GTTATTATCACTGCTCCAGCAAAAGGTGCAGACATTCCAACCTATGTCGT
TGGAGTTAACGAGAAGGATTACGATCACGAGGTTGCAAACATTGTGAGCA
ATGCTTCTTGCACCACAAACTGTTTGGCTCCTTTTGTGAAGGTCATGGAT
GAAGAATTGGGGATTGTCAAGGGAGCGATTACAACTACTCACTCCTACAC
TGGAGACCAGAGGCTCTTGGATGCTTCACACAGGGACTTGAGGAGAGCGA
GAGCTGCAGCGTTGAACATTGTCCCAACGAGCACAGGTGCCGCCAAGGCT
GTTTCTCTTGTGCTGCCACAGCTCAAAGGCAAGCTCAACGGCATTGCGCT
CCGTGTGCCAACACCAAATGTTTCAGTCGTTGACCTTGTTGTGAACGTTG
AGAAAAAGGGTATTACAGCAGAAGATGTTAATGCAGCCTTCAGAAAGGCT
GCTGAGGGGCCACTGAAGGGCATATTGGCCGTCTGCGATGTTCCACTGGT
GTCGGTGGACTTCCGATGCTCTGATGTTTCCTCCACCATTGACTCTTCAT
TGACCATGGTCATGGGTGATGATATGGTCAAGGTTGTTGCCTGGTACGAC
AATGAATGGGGATACAGCCAAAGGGTTGTCGATTTGGCGCATTTGGTTGC
AACCAAGTGGCCAGGCGTGGCTGCAGGCGGAAGCGGAGACCCATTGGAGG
ATTTCTGCCAGACAAACCCTGCTGATGAGGAGTGCAAAGTTTATGAAGCT
TAAATTC
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