CX077145

Overview
NameCX077145
Unique NameCX077145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3PE_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3 OS=Zea mays GN=GAPC3 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.404e-48
Identity = 109/236 (46.19%), Postives = 143/236 (60.59%), Query Frame = 3
Query:    6 DGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL-AHLVATK 707
            D   A  H++ GAKKV+I+AP+K  D P +VVGVNEK+Y  ++ NIVSNASCTTNCLAP  KV++++ GIV+G +TT H+ T  Q                   NI+P+STGAAKAV  VLP L GKL G++ R               EK   T +++ AA +  AEG LKGIL   +  LVS DF+    SS  D+   + +  + VK+V+WYDNEWGYS RVVDL  H+ +TK
Sbjct:  106 DQEKAAAHLKGGAKKVVISAPSK--DAPMFVVGVNEKEYKSDI-NIVSNASCTTNCLAPLAKVINDKFGIVEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPVLNGKLTGMSFRVPTVDVSVVDLTVRLEKSA-TYDEIKAAVKAEAEGSLKGILGYVEEDLVSTDFQGDSRSSIFDAKAGIALNGNFVKLVSWYDNEWGYSTRVVDLIRHMNSTK 337          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P_STRAU (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces aureofaciens GN=gap PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.364e-48
Identity = 108/230 (46.96%), Postives = 138/230 (60.00%), Query Frame = 3
Query:   18 AGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATK 707
            A  H+ AGAKKV+++APA GADI T   GVN   YD ++  IVSNASCTTN LAP  KV+D+  GI  G +TT H+YT +Q                  NIVPT+TGAAKA+ LVLP L GKL+G ++R                 + +T ++V  A+R AA+GPL G+L   + PLVS D   +  SS  DS LT V G   +KVVAWYDNEWG+S RV+D   L+A +
Sbjct:  106 ARAHLDAGAKKVLVSAPADGADI-TLAFGVNTDAYDPDLHTIVSNASCTTNALAPLAKVLDDLAGIEHGFMTTVHAYTQEQNLQDGPHRDPRRARAAAVNIVPTTTGAAKAIGLVLPNLDGKLSGDSIRVPVPVGSIVELNTTV-ARDVTRDEVLDAYRAAAQGPLAGVLEYSEDPLVSSDITGNPASSIFDSELTRVDGRH-IKVVAWYDNEWGFSNRVIDTLQLLAAR 332          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P_PODAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Podospora anserina GN=GPD PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.364e-48
Identity = 106/229 (46.29%), Postives = 142/229 (62.01%), Query Frame = 3
Query:   18 AGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA 701
            A  H++ GAK+VII+AP+  AD P YV+GVNEK YD + A ++SNASCTTNCLAP  KV++++ GIV+G +TT HSYT  Q                   NI+P+STGAAKAV  V+P+L GKL G+A R               EK   + E + AA ++A+EG LKGIL   +  +VS D   +  SS  D+   + + D+ VK+V+WYDNEWGYS+RV+DL   VA
Sbjct:  107 ASAHLKGGAKRVIISAPS--ADAPMYVMGVNEKTYDGKAA-VISNASCTTNCLAPLAKVVNDKFGIVEGLMTTVHSYTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELNGKLTGMAFRVPTSNVSVVDLTCRLEKPA-SYETIKAALKEASEGELKGILGYTEDEIVSSDLNGNANSSIFDAKAGISLNDNFVKLVSWYDNEWGYSRRVLDLLSYVA 331          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3PD_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 2 OS=Zea mays GN=GAPC2 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.364e-48
Identity = 107/236 (45.34%), Postives = 140/236 (59.32%), Query Frame = 3
Query:    6 DGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL-AHLVATK 707
            D   A  H++ GAKKV+I+AP+K  D P +VVGVNE  Y  +V NIVSNASCTTNCLAP  KV+ +  GI++G +TT H+ T  Q                   NI+P+STGAAKAV  VLP+L GKL G++ R               EK G + E++  A + A+EGPLKGI+   +  LVS DF     SS  D+   + + D  +K+V+WYDNEWGYS RVVDL  H+  T+
Sbjct:  106 DKDKAAAHLKGGAKKVVISAPSK--DAPMFVVGVNEDKYTSDV-NIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPELNGKLTGMSFRVPTVDVSVVDLTVRIEK-GASYEEIKKAIKAASEGPLKGIMGYVEEDLVSTDFTGDSRSSIFDAKAGIALNDHFIKLVSWYDNEWGYSNRVVDLIRHMFKTQ 337          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P_AJECA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ajellomyces capsulata GN=GPD PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.863e-47
Identity = 103/229 (44.98%), Postives = 138/229 (60.26%), Query Frame = 3
Query:   18 AGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA 701
            A  H++ GAKKVII+AP+  AD P +V+GVNEK YD  V N++SNASCTTNCLAP  KV+++  G+ +G +TT HSYT  Q                   NI+P+STGAAKAV  V+P L GKL G+++R               EK  +T + +    +KA+EG LKGIL   +  LVS D      SS  D+S  + + D  +K+++WYDNEWGYS+RVVDL   +A
Sbjct:  107 ASAHLKGGAKKVIISAPS--ADAPMFVMGVNEKTYDPSV-NVLSNASCTTNCLAPLAKVINDNFGLTEGLMTTIHSYTATQKTVDGPSSKDWRGGRTAAQNIIPSSTGAAKAVGKVIPSLNGKLTGMSMRVPTANVSVVDLTCKTEKP-VTYDQIKQTIKKASEGELKGILGYSEDALVSSDLNGDSRSSIFDASAGIALNDHFIKLISWYDNEWGYSRRVVDLIAYIA 331          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3PC_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Hordeum vulgare GN=GAPC PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.863e-47
Identity = 110/236 (46.61%), Postives = 141/236 (59.75%), Query Frame = 3
Query:    6 DGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL-AHLVATK 707
            D   A  HI+ GAKKVII+AP+K  D P +V GVNEK+Y  ++ +IVSNASCTTNC AP  KV+++  GIV+G +TT H+ T  Q                   NI+P+STGAAKAV  VLP+L GKL G+A R                K   T E + AA ++ +EG LKGIL   D  LVS DF+    SS  D+   + + D+ VK+V+WYDNEWGYS RVVDL  H+ +TK
Sbjct:   74 DKDKAAAHIKGGAKKVIISAPSK--DAPMFVCGVNEKEYKSDI-DIVSNASCTTNCPAPLAKVINDRFGIVEGLMTTVHAMTATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTVDVSVVDLTVRLAKPA-TYEQIKAAIKEESEGNLKGILGYVDEDLVSTDFQGDSRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSTRVVDLIRHMHSTK 305          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P3_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Caenorhabditis elegans GN=gpd-3 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.863e-47
Identity = 103/231 (44.59%), Postives = 138/231 (59.74%), Query Frame = 3
Query:   18 AGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATK 707
            A  H++ GAKKVII+AP+  AD P +VVGVN + YDH   +I+SNASCTTNCLAP  KV+++  GI++G +TT H+ T  Q                   NI+P STGAAKAV  V+P+L GKL G+A R               EK   + +D+    + AA+GP+KGILA  +  +VS DF     SS  D+  ++ +    VK+V+WYDNE+GYS RVVDL   +ATK
Sbjct:  113 ANAHLKGGAKKVIISAPS--ADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTARLEKPA-SLDDIKKVIKAAADGPMKGILAYTEDQVVSTDFVSDTNSSIFDAGASISLNPHFVKLVSWYDNEFGYSNRVVDLISYIATK 340          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P2_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caenorhabditis elegans GN=gpd-2 PE=1 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.863e-47
Identity = 103/231 (44.59%), Postives = 138/231 (59.74%), Query Frame = 3
Query:   18 AGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATK 707
            A  H++ GAKKVII+AP+  AD P +VVGVN + YDH   +I+SNASCTTNCLAP  KV+++  GI++G +TT H+ T  Q                   NI+P STGAAKAV  V+P+L GKL G+A R               EK   + +D+    + AA+GP+KGILA  +  +VS DF     SS  D+  ++ +    VK+V+WYDNE+GYS RVVDL   +ATK
Sbjct:  113 ANAHLKGGAKKVIISAPS--ADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTARLEKPA-SLDDIKKVIKAAADGPMKGILAYTEDQVVSTDFVSDTNSSIFDAGASISLNPHFVKLVSWYDNEFGYSNRVVDLISYIATK 340          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3PC_GINBI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ginkgo biloba PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.434e-47
Identity = 108/235 (45.96%), Postives = 142/235 (60.43%), Query Frame = 3
Query:    6 DGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL-AHLVAT 704
            D   A  HI+ GAKKV+ITAP+K  D P +VVGVNE +Y  ++A IVSNASCTTNCLAP  KV+++  GIV+G +TT HS T  Q                   NI+P+STGAAKAV  VLP L GKL G+A R               EK   + +++ AA ++ +EG LKGIL   +  +VS DF   + SS  D+   + + D+ VK+V+WYDNEWGYS RV+DL  H+ +T
Sbjct:  109 DKEKAAAHIKGGAKKVVITAPSK--DAPMFVVGVNEHEYKPDLA-IVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSNKDWRGGRGAGFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTPDVSVVDLTVRLEKPA-SYDEIKAAIKEESEGKLKGILGYTEDDVVSTDFIGDNRSSIFDAKAGIALSDNFVKLVSWYDNEWGYSSRVIDLIVHMAST 339          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P_COLGL (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum gloeosporioides GN=GPDA PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.178e-47
Identity = 105/229 (45.85%), Postives = 144/229 (62.88%), Query Frame = 3
Query:   18 AGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA 701
            A  H+Q GAKKVII+AP+  AD P YV+ VNEK YD   A+++SNASCTTNCLAP  KV++++ GIV+G +TT HSYT  Q                   NI+P+STGAAKAV  V+P+L GKL  +++R               EK G + +++  A ++AAEGPLKG+LA  +  +VS D   +  SS  D+   + + ++ VK+V+WYDNEWGYS+RV+DL   VA
Sbjct:  108 AKAHLQGGAKKVIISAPS--ADAPMYVMVVNEKSYDGS-ADVISNASCTTNCLAPLAKVINDKFGIVEGLMTTVHSYTATQKTVHGPSAKDWRGGRTAAQNIIPSSTGAAKAVGKVIPELNGKLTDMSMRVPTTNVSVVDLTARIEK-GASYDEIKQAIKEAAEGPLKGVLAYTEDDVVSTDMIGNPNSSIFDAKAGISLNNNFVKLVSWYDNEWGYSRRVLDLLAHVA 332          
The following BLAST results are available for this feature:
BLAST of CX077145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 349
Match NameE-valueIdentityDescription
G3PE_MAIZE6.404e-4846.19Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_STRAU8.364e-4846.96Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3P_PODAN8.364e-4846.29Glyceraldehyde-3-phosphate dehydrogenase OS=Podosp... [more]
G3PD_MAIZE8.364e-4845.34Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_AJECA1.863e-4744.98Glyceraldehyde-3-phosphate dehydrogenase OS=Ajello... [more]
G3PC_HORVU1.863e-4746.61Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P3_CAEEL1.863e-4744.59Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Caen... [more]
G3P2_CAEEL1.863e-4744.59Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caen... [more]
G3PC_GINBI2.434e-4745.96Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_COLGL3.178e-4745.85Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_54G05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-54G05-M10-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077145 ID=CX077145; Name=CX077145; organism=Citrus sinensis; type=EST; length=807bp
TTGTGGACGGCCCTGGTGCTGGAAAGCACATCCAAGCTGGTGCCAAGAAA
GTTATTATCACTGCTCCAGCAAAAGGTGCAGACATTCCAACCTATGTCGT
TGGAGTTAACGAGAAGGATTACGATCACGAGGTTGCAAACATTGTGAGCA
ATGCTTCTTGCACCACAAACTGTTTGGCTCCTTTTGTGAAGGTCATGGAT
GAAGAATTGGGGATTGTCAAGGGAGCGATTACAACTACTCACTCCTACAC
TGGAGACCAGAGGCTCTTGGATGCTTCACACAGGGACTTGAGGAGAGCGA
GAGCTGCAGCGTTGAACATTGTCCCAACGAGCACAGGTGCCGCCAAGGCT
GTTTCTCTTGTGCTGCCACAGCTCAAAGGCAAGCTCAACGGCATTGCGCT
CCGTGTGCCAACACCAAATGTTTCAGTCGTTGACCTTGTTGTGAACGTTG
AGAAAAAGGGTATTACAGCAGAAGATGTTAATGCAGCCTTCAGAAAGGCT
GCTGAGGGGCCACTGAAGGGCATATTGGCCGTCTGCGATGTTCCACTGGT
GTCGGTGGACTTCCGATGCTCTGATGTTTCCTCCACCATTGACTCTTCAT
TGACCATGGTCATGGGTGATGATATGGTCAAGGTTGTTGCCTGGTACGAC
AATGAATGGGGATACAGCCAAAGGGTTGTCGATTTGGCGCATTTGGTTGC
AACCAAGTGGCCAGGCGTGGCTGCAGGCGGAAGCGGAGACCCATTGGAGG
ATTTCTGCCAGACAAACCCTGCTGATGAGGAGTGCAAAGTTTATGAAGCT
TAAATTC
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