CX077145

Overview
NameCX077145
Unique NameCX077145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P_PICPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia pastoris GN=GPD PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.514e-46
Identity = 107/230 (46.52%), Postives = 138/230 (60.00%), Query Frame = 3
Query:   15 GAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA 701
            GA KHI AGAKKV+ITAP+K  D P +VVGVNE+ Y  ++ NIVSNASCTTNCLAP  KV+++  GI  G +TT HS T  Q                   NI+P+STGAAKAV  V+P+L GKL G+A R                KK  T E++ +  + A+EG LKG+L   +  +VS DF   + SS  D+S  + +    VK+++WYDNE+GYS RVVDL   VA
Sbjct:  106 GAQKHIDAGAKKVVITAPSK--DAPMFVVGVNEEKYTSDL-NIVSNASCTTNCLAPLAKVVNDTFGIESGLMTTVHSMTATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVIPELNGKLTGLAFRVPTVDVSVVDLTVNL-KKETTYEEIKSVIKAASEGKLKGVLGYTEDAVVSSDFLGDERSSIFDASAGIQLTPSFVKLISWYDNEYGYSTRVVDLLQHVA 331          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P_NEUCR (Glyceraldehyde 3-phosphate-dehydrogenase OS=Neurospora crassa GN=gpd-1 PE=2 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 3.514e-46
Identity = 102/229 (44.54%), Postives = 138/229 (60.26%), Query Frame = 3
Query:   18 AGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA 701
            A  H++ GAKKVII+AP+  AD P YV+GVN + YD   A+++SNASCTTNCLAP  KV+ +   IV+G +TT HSYT  Q                   NI+P+STGAAKAV  V+P L GKL G+A+R               EK G T +++    +KA+EGPL GILA  +  +VS D   +  SS  D+   + +  + VK+V+WYDNEWGYS+RV+DL   ++
Sbjct:  107 ASAHLKGGAKKVIISAPS--ADAPMYVMGVNNETYDGS-ADVISNASCTTNCLAPLAKVIHDNFTIVEGLMTTVHSYTATQKTVDGPSAKDWRGGRTAAQNIIPSSTGAAKAVGKVIPDLNGKLTGMAMRVPTANVSVVDLTARIEK-GATYDEIKEVIKKASEGPLAGILAYTEDEVVSSDMNGNPASSIFDAKAGISLNKNFVKLVSWYDNEWGYSRRVLDLISYIS 331          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P_HUMAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Homo sapiens GN=GAPDH PE=1 SV=3)

HSP 1 Score: 185.267 bits (469), Expect = 3.514e-46
Identity = 103/231 (44.59%), Postives = 138/231 (59.74%), Query Frame = 3
Query:   18 AGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATK 707
            AG H+Q GAK+VII+AP+  AD P +V+GVN + YD+ +  I+SNASCTTNCLAP  KV+ +  GIV+G +TT H+ T  Q                   NI+P STGAAKAV  V+P+L GKL G+A R               EK     +D+    ++A+EGPLKGIL   +  +VS DF     SST D+   + + D  VK+++WYDNE+GYS RVVDL   +A+K
Sbjct:  108 AGAHLQGGAKRVIISAPS--ADAPMFVMGVNHEKYDNSL-KIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANVSVVDLTCRLEKPA-KYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMAHMASK 334          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P_DEBHA (Glyceraldehyde-3-phosphate dehydrogenase OS=Debaryomyces hansenii GN=GPD PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.514e-46
Identity = 107/230 (46.52%), Postives = 139/230 (60.43%), Query Frame = 3
Query:   15 GAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA 701
            GA KHI  GAKKVIITAP+  +D P +VVGVNE+ Y  ++  IVSNASCTTNCLAP  KV++++ GI +G +TT HS T  Q                   NI+P+STGAAKAV  V+P+L GKL G++LR                KK  T E+++ A + A+ G LKGIL   +  +VS DF  SD SS  D    +++    VK+++WYDNE+GYS RVVDL   VA
Sbjct:  106 GAQKHIDGGAKKVIITAPS--SDAPMFVVGVNEQKYTPDL-KIVSNASCTTNCLAPLAKVINDKFGIEEGLMTTVHSITATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVIPELNGKLTGMSLRVPTVDVSVVDLTVRL-KKSATYEEISEAIKAASNGELKGILGYTEDAVVSTDFLGSDYSSIFDQKAGILLSPTFVKLISWYDNEFGYSTRVVDLLEHVA 331          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P_BACFR (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacteroides fragilis GN=gap PE=3 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 3.514e-46
Identity = 106/231 (45.89%), Postives = 139/231 (60.17%), Query Frame = 3
Query:   18 AGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATK 707
            A KHIQAGAKKVI++AP+K +  P +V GVN   Y  +  +I+SNASCTTNCLAP  KV++++ GIVKG +TT H+ T  Q                   NI+P+STGAAKAV  VLP L GKL G+A R               EK    AE +NAA ++A+EG LKGIL   +  +VS DFR    +S  DS   + +  +  KVV+WYDNEWGYS +V ++A ++A K
Sbjct:  107 ARKHIQAGAKKVIMSAPSKDST-PMFVYGVNHTSYAGQ--DIISNASCTTNCLAPIAKVLNDKFGIVKGLMTTVHAATATQKTVDGPSKKDWRGGRGILENIIPSSTGAAKAVGKVLPVLNGKLTGMAFRVPTSDVSVVDLTVVLEKAATMAE-INAAMKEASEGELKGILGYTEDAVVSTDFRGCANTSIYDSKAGISLDSNFAKVVSWYDNEWGYSNKVCEMARVIAAK 333          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P1_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap1 PE=3 SV=4)

HSP 1 Score: 185.267 bits (469), Expect = 3.514e-46
Identity = 105/229 (45.85%), Postives = 136/229 (59.39%), Query Frame = 3
Query:    6 DGPGAGKHIQAGAKKVIITAPAKGAD-IPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL 686
            D  GA KH+QAGAK+VII+AP K  D + T +VGVN   +D     IVSNASCTTNCLAP  KV+++  G+ +G +TT H+ T  Q                   NI+P+STGAAKAV+LVLP+LKGKL G+A R                K   + +++ AA ++A+EG L GIL   D  +VS DF+    SS  D+   + +  +  KVVAWYDNEWGYS RVVDL
Sbjct:  103 DSEGASKHLQAGAKRVIISAPTKDPDRVRTLLVGVNHDLFDPSKDVIVSNASCTTNCLAPIAKVINDNFGLTEGLMTTVHAMTATQPTVDGPSKKDWRGGRGAAQNIIPSSTGAAKAVALVLPELKGKLTGMAFRVPTPDVSVVDLTFKTAK-ATSYKEICAAMKQASEGSLAGILGYTDEEVVSTDFQGDTHSSIFDAGAGIELNSNFFKVVAWYDNEWGYSNRVVDL 330          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P_PARBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=GPD PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.589e-46
Identity = 103/229 (44.98%), Postives = 137/229 (59.83%), Query Frame = 3
Query:   18 AGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA 701
            A  H+  GAKKVII+AP+  AD P +V+GVNEK Y  +++ ++SNASCTTNCLAP  KV+ +  GI +G +TT HSYT  Q                   NI+P+STGAAKAV  V+P L GKL G+A+R               EK  +T + + AA + A+EG LKGIL   +  LVS D      SS  D+S  + + D  VK+++WYDNEWGYS+RV+DL   +A
Sbjct:  108 AKAHLSGGAKKVIISAPS--ADAPMFVMGVNEKSYRPDIS-VLSNASCTTNCLAPLAKVIHDNFGIAEGLMTTIHSYTATQKTVDGPSHKDWRGGRTAAQNIIPSSTGAAKAVGKVIPALNGKLTGMAMRVPTANVSVVDLTCRTEKP-VTYDQIKAAVKAASEGELKGILGYSEDALVSTDLNGDPRSSIFDASAGIALNDRFVKLISWYDNEWGYSRRVLDLIAYIA 332          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P_MUSPF (Glyceraldehyde-3-phosphate dehydrogenase OS=Mustela putorius furo GN=GAPDH PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.589e-46
Identity = 103/231 (44.59%), Postives = 138/231 (59.74%), Query Frame = 3
Query:   18 AGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATK 707
            AG H++ GAK+VII+AP+  AD P +V+GVN + YD+ +  IVSNASCTTNCLAP  KV+ +  GIV+G +TT H+ T  Q                   NI+P STGAAKAV  V+P+L GKL G+A R               EK     +D+    ++A+EGPLKGIL   +  +VS DF     SST D+   + + D  VK+++WYDNE+GYS RVVDL   +A+K
Sbjct:  106 AGAHLKGGAKRVIISAPS--ADAPMFVMGVNHEKYDNSL-KIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAA-KYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVYMASK 332          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P_CANFA (Glyceraldehyde-3-phosphate dehydrogenase OS=Canis familiaris GN=GAPDH PE=2 SV=3)

HSP 1 Score: 184.882 bits (468), Expect = 4.589e-46
Identity = 103/231 (44.59%), Postives = 138/231 (59.74%), Query Frame = 3
Query:   18 AGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATK 707
            AG H++ GAK+VII+AP+  AD P +V+GVN + YD+ +  IVSNASCTTNCLAP  KV+ +  GIV+G +TT H+ T  Q                   NI+P STGAAKAV  V+P+L GKL G+A R               EK     +D+    ++A+EGPLKGIL   +  +VS DF     SST D+   + + D  VK+++WYDNE+GYS RVVDL   +A+K
Sbjct:  106 AGAHLKGGAKRVIISAPS--ADAPMFVMGVNHEKYDNSL-KIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGKMWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAA-KYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVYMASK 332          
BLAST of CX077145 vs. ExPASy Swiss-Prot
Match: G3P_SCLSC (Glyceraldehyde-3-phosphate dehydrogenase OS=Sclerotinia sclerotiorum GN=GPD PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.994e-46
Identity = 99/229 (43.23%), Postives = 141/229 (61.57%), Query Frame = 3
Query:   18 AGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXX-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXXEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA 701
            A  H++ GAKKV+I+AP+  AD P YV+GVN + Y+ E A+++SNASCTTNCLAP  KV+++E  I++  +TT HSYT  Q                   NI+P+STGAAKAV  V+P+L GKL G+++R               EK   + +++    +KAA GPLKGILA  +  +VS D    + SS  D+   + +  + VK+V+WYDNEWGYS+RV+DL H ++
Sbjct:  108 AKAHLKGGAKKVVISAPS--ADAPMYVMGVNNETYNGE-ADVISNASCTTNCLAPLAKVINDEFTIIESLMTTIHSYTATQKTVDGPSAKDWRGGRTAAQNIIPSSTGAAKAVGKVIPELNGKLTGMSMRVPTATVSVVDLTVRIEKAA-SYDEIKEVIKKAANGPLKGILAYTEDDVVSTDMNGDNHSSIFDAKAGISLNKNFVKLVSWYDNEWGYSRRVLDLLHYIS 332          
The following BLAST results are available for this feature:
BLAST of CX077145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 349
Match NameE-valueIdentityDescription
G3P_PICPA3.514e-4646.52Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]
G3P_NEUCR3.514e-4644.54Glyceraldehyde 3-phosphate-dehydrogenase OS=Neuros... [more]
G3P_HUMAN3.514e-4644.59Glyceraldehyde-3-phosphate dehydrogenase OS=Homo s... [more]
G3P_DEBHA3.514e-4646.52Glyceraldehyde-3-phosphate dehydrogenase OS=Debary... [more]
G3P_BACFR3.514e-4645.89Glyceraldehyde-3-phosphate dehydrogenase OS=Bacter... [more]
G3P1_ANAVT3.514e-4645.85Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anab... [more]
G3P_PARBA4.589e-4644.98Glyceraldehyde-3-phosphate dehydrogenase OS=Paraco... [more]
G3P_MUSPF4.589e-4644.59Glyceraldehyde-3-phosphate dehydrogenase OS=Mustel... [more]
G3P_CANFA4.589e-4644.59Glyceraldehyde-3-phosphate dehydrogenase OS=Canis ... [more]
G3P_SCLSC5.994e-4643.23Glyceraldehyde-3-phosphate dehydrogenase OS=Sclero... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_54G05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-54G05-M10-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077145 ID=CX077145; Name=CX077145; organism=Citrus sinensis; type=EST; length=807bp
TTGTGGACGGCCCTGGTGCTGGAAAGCACATCCAAGCTGGTGCCAAGAAA
GTTATTATCACTGCTCCAGCAAAAGGTGCAGACATTCCAACCTATGTCGT
TGGAGTTAACGAGAAGGATTACGATCACGAGGTTGCAAACATTGTGAGCA
ATGCTTCTTGCACCACAAACTGTTTGGCTCCTTTTGTGAAGGTCATGGAT
GAAGAATTGGGGATTGTCAAGGGAGCGATTACAACTACTCACTCCTACAC
TGGAGACCAGAGGCTCTTGGATGCTTCACACAGGGACTTGAGGAGAGCGA
GAGCTGCAGCGTTGAACATTGTCCCAACGAGCACAGGTGCCGCCAAGGCT
GTTTCTCTTGTGCTGCCACAGCTCAAAGGCAAGCTCAACGGCATTGCGCT
CCGTGTGCCAACACCAAATGTTTCAGTCGTTGACCTTGTTGTGAACGTTG
AGAAAAAGGGTATTACAGCAGAAGATGTTAATGCAGCCTTCAGAAAGGCT
GCTGAGGGGCCACTGAAGGGCATATTGGCCGTCTGCGATGTTCCACTGGT
GTCGGTGGACTTCCGATGCTCTGATGTTTCCTCCACCATTGACTCTTCAT
TGACCATGGTCATGGGTGATGATATGGTCAAGGTTGTTGCCTGGTACGAC
AATGAATGGGGATACAGCCAAAGGGTTGTCGATTTGGCGCATTTGGTTGC
AACCAAGTGGCCAGGCGTGGCTGCAGGCGGAAGCGGAGACCCATTGGAGG
ATTTCTGCCAGACAAACCCTGCTGATGAGGAGTGCAAAGTTTATGAAGCT
TAAATTC
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